Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400028923
CDS Infomation

pacid=37431617 polypeptide=PGSC0003DMP400019659 locus=PGSC0003DMG400011135 ID=PGSC0003DMT400028923.v4.03 annot-version=v4.03
Sequence

ATGGCTTGCAGTGTTGCAGACTCTGGTTTCCTGTTCTTGGCTTCCAAGAAAAGATCAGTT
CATAGCACTAGAATTGGGCAAATTGCTTCTACAGGAACATATTGTTTAAAGTGGGAAAGT
CTACCTCAGATAAGCTCGAAACAGAAAGGCTGCTTAATTTACTCGAGAAAGAAAAATGTT
ATACAAGCTGTTGCAGTTCCGATAGCACCTGCACCCTTAGACTCTGCAGAGGAGAGAAAA
CGATTAAGTGAAAAATATGGTTTTAGACAAATTGGAGAACCACTACCTGATAACGTCACA
ATGAGAGATATTACTGAGTCACTACCTAAGAAGGTATTCGAGATTGACGATGGAAAGGCA
TTGAAGTCAGTTTTGATATCAGTAACTTCATACACACTGGGGCTCTTCATGATTGCCAAA
GCTCCATGGTACCTACTTCCCCTGGCCTGGGCTTGGACAGGAACAGCAGTTACAGGGTTC
TTTGTAATAGGACATGATTGCGCTCACAAATCCTTCTCAAAGAACAAATTATTGGAAGAT
ATTGTTGGAACACTAGCCTTTTTGCCATTGATATATCCCTATGAGCCATGGAGGTTCAAG
CATGATCGGCATCACGCGAAAACAAACATGTTGCACGAAGACACAGCTTGGCAGCCTGTT
TGGAAGGAGGAGTTCGATTCAGTCCCTGCTCTGAGGAAGGCAATTATATTAGGTTACGGC
CCTATTCGACCTTGGATGTCTGTAGCTCACTGGTGGCTCTGTCATTTCAATTTGAGTAAG
TTCAGACCAAATGAAATTGACAGGGTGAAAATAAGTTTGGGTTGTGTCTTTGCTTTTATG
GCAATTGGCTGGCCACTGATAATCTGGAAAACAGGGATTATTGGATGGATCAAGTTCTGG
TTAATGCCATGGTTGGGTTATCATTTTTGGATGAGTACTTTTACAATGGTTCATCATACG
GCACCCCACATACCCTTCAAAACTTCTGATGAGTGGAATGCCGCTCAGGCCCAGCTGAAT
GGCACAGTTCACTGTGACTATCCTAGTTGGATTGAGGTTCTTTGTCATGATATCAATGTT
CATATTCCCCACCACATATCCCCCAGAATACCAAGTTATAATTTACGGGCAGCTCATCAA
TCTCTCCAAGAGAATTGGGGAAAGTACCTGAACGAGGCTTCATGGAATTGGCGTCTAATG
AAGACAATTCTGACAGTATGTCATGTCTATGATAAGGAGCGGAATTATGTTGCATTTGAT
GAAGTTGTCCCTGAAGAAGCCCAGCCAATCACATTCCTTAAAAAAGTAATGCCAGACTAC
GCTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400019659
PEP Infomation

pacid=37431617 transcript=PGSC0003DMT400028923 locus=PGSC0003DMG400011135 ID=PGSC0003DMT400028923.v4.03 annot-version=v4.03
Sequence

MACSVADSGFLFLASKKRSVHSTRIGQIASTGTYCLKWESLPQISSKQKGCLIYSRKKNV
IQAVAVPIAPAPLDSAEERKRLSEKYGFRQIGEPLPDNVTMRDITESLPKKVFEIDDGKA
LKSVLISVTSYTLGLFMIAKAPWYLLPLAWAWTGTAVTGFFVIGHDCAHKSFSKNKLLED
IVGTLAFLPLIYPYEPWRFKHDRHHAKTNMLHEDTAWQPVWKEEFDSVPALRKAIILGYG
PIRPWMSVAHWWLCHFNLSKFRPNEIDRVKISLGCVFAFMAIGWPLIIWKTGIIGWIKFW
LMPWLGYHFWMSTFTMVHHTAPHIPFKTSDEWNAAQAQLNGTVHCDYPSWIEVLCHDINV
HIPHHISPRIPSYNLRAAHQSLQENWGKYLNEASWNWRLMKTILTVCHVYDKERNYVAFD
EVVPEEAQPITFLKKVMPDYA*

Transcript Sequence

Transcript ID

PGSC0003DMT400028923
Transcript Infomation

pacid=37431617 locus=PGSC0003DMG400011135 ID=PGSC0003DMT400028923.v4.03 annot-version=v4.03
Sequence

ATGGCTTGCAGTGTTGCAGACTCTGGTTTCCTGTTCTTGGCTTCCAAGAAAAGATCAGTT
CATAGCACTAGAATTGGGCAAATTGCTTCTACAGGAACATATTGTTTAAAGTGGGAAAGT
CTACCTCAGATAAGCTCGAAACAGAAAGGCTGCTTAATTTACTCGAGAAAGAAAAATGTT
ATACAAGCTGTTGCAGTTCCGATAGCACCTGCACCCTTAGACTCTGCAGAGGAGAGAAAA
CGATTAAGTGAAAAATATGGTTTTAGACAAATTGGAGAACCACTACCTGATAACGTCACA
ATGAGAGATATTACTGAGTCACTACCTAAGAAGGTATTCGAGATTGACGATGGAAAGGCA
TTGAAGTCAGTTTTGATATCAGTAACTTCATACACACTGGGGCTCTTCATGATTGCCAAA
GCTCCATGGTACCTACTTCCCCTGGCCTGGGCTTGGACAGGAACAGCAGTTACAGGGTTC
TTTGTAATAGGACATGATTGCGCTCACAAATCCTTCTCAAAGAACAAATTATTGGAAGAT
ATTGTTGGAACACTAGCCTTTTTGCCATTGATATATCCCTATGAGCCATGGAGGTTCAAG
CATGATCGGCATCACGCGAAAACAAACATGTTGCACGAAGACACAGCTTGGCAGCCTGTT
TGGAAGGAGGAGTTCGATTCAGTCCCTGCTCTGAGGAAGGCAATTATATTAGGTTACGGC
CCTATTCGACCTTGGATGTCTGTAGCTCACTGGTGGCTCTGTCATTTCAATTTGAGTAAG
TTCAGACCAAATGAAATTGACAGGGTGAAAATAAGTTTGGGTTGTGTCTTTGCTTTTATG
GCAATTGGCTGGCCACTGATAATCTGGAAAACAGGGATTATTGGATGGATCAAGTTCTGG
TTAATGCCATGGTTGGGTTATCATTTTTGGATGAGTACTTTTACAATGGTTCATCATACG
GCACCCCACATACCCTTCAAAACTTCTGATGAGTGGAATGCCGCTCAGGCCCAGCTGAAT
GGCACAGTTCACTGTGACTATCCTAGTTGGATTGAGGTTCTTTGTCATGATATCAATGTT
CATATTCCCCACCACATATCCCCCAGAATACCAAGTTATAATTTACGGGCAGCTCATCAA
TCTCTCCAAGAGAATTGGGGAAAGTACCTGAACGAGGCTTCATGGAATTGGCGTCTAATG
AAGACAATTCTGACAGTATGTCATGTCTATGATAAGGAGCGGAATTATGTTGCATTTGAT
GAAGTTGTCCCTGAAGAAGCCCAGCCAATCACATTCCTTAAAAAAGTAATGCCAGACTAC
GCTTGA