Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400028879
CDS Infomation

pacid=37477765 polypeptide=PGSC0003DMP400019632 locus=PGSC0003DMG400011114 ID=PGSC0003DMT400028879.v4.03 annot-version=v4.03
Sequence

ATGTGTCAAGGTCTGCCGTTGGCTGCAAGTGTGTTGGGAGGCCTCTTATGCAACAAGGAA
AAACATGAATGGCAGGCAATTCTTGATGGAAACCACCTTGTTGCAGGTGAAGATGATAAA
GGGGAAAATAGCATAAAGAAAATCCTAAAACTCAGCTATGATTATCTACCATCTCCACAT
CTGAAGAAATGTTTTGCTTACTTTGCTATGTTTCCAAAAGATTTTGAGTTTGAGAAGGAC
CAACTAATCCAACTCTGGATGGCAGAAGGGTTTCTTCGTCCATGTCAAGAGACCCCCGTG
ATGGAAGACGTCGGGAACAAGTTTTTCCAACTCTTGTTGCAATATTCCTTGCTGCAAGAT
GTTAAGATAGATGAGCTCAACAATATAACACATTGTAAAATGCATGATCTTGTGCATGAT
TTGGCTGAAGATATTTTAAAGTCTAAACTATTTGATCAAAAGAGTGTTAGAGGAGAAAAT
CTTTCTCAAGTCCGATACTTTGGATGGAACTCACCAATTCTTGAGGGTTTTAAATTGTCC
AGGTCAGGCATCAAGGAGTTATCAGCCAAAATCGGCAAGCTAATATACCTGAGGTATCTT
GATCTCTCCGACACGCAGATCGAAGCCTTGCCCAATTCCATTTGCAAGCTCTACAATTTG
CAAACATTTAGAGTCAATGACTATTCTTCACTCAGGAAGCTTCCAGAAGAAATGGCAAAT
ATGATAAGTTTGAGACACATATATTGCAGCTATCATTACAAATTTGATATGCAGATACCA
CTTAATATGGGACAATTGACTTGTGTTCAAACCCTAGAGTTTTTCAAGGTGGGTTCAGAG
AAAGGTCGTCGAATAGAAGAATTAGGTCATCTGAAAAACCTTAGAGGTGAATTGACGATC
AGAGGTCTGCAATCAGTCAGAACTAAAGAAGAGGCTCGAGCAGCATATTTACAGGAGAAA
CCAAATATCTACAAGCTGACATATTTGTGGTCCCATGATGAATCAGATGTATGTTAG

Peptide Sequence

PEP ID

PGSC0003DMP400019632
PEP Infomation

pacid=37477765 transcript=PGSC0003DMT400028879 locus=PGSC0003DMG400011114 ID=PGSC0003DMT400028879.v4.03 annot-version=v4.03
Sequence

MCQGLPLAASVLGGLLCNKEKHEWQAILDGNHLVAGEDDKGENSIKKILKLSYDYLPSPH
LKKCFAYFAMFPKDFEFEKDQLIQLWMAEGFLRPCQETPVMEDVGNKFFQLLLQYSLLQD
VKIDELNNITHCKMHDLVHDLAEDILKSKLFDQKSVRGENLSQVRYFGWNSPILEGFKLS
RSGIKELSAKIGKLIYLRYLDLSDTQIEALPNSICKLYNLQTFRVNDYSSLRKLPEEMAN
MISLRHIYCSYHYKFDMQIPLNMGQLTCVQTLEFFKVGSEKGRRIEELGHLKNLRGELTI
RGLQSVRTKEEARAAYLQEKPNIYKLTYLWSHDESDVC*

Transcript Sequence

Transcript ID

PGSC0003DMT400028879
Transcript Infomation

pacid=37477765 locus=PGSC0003DMG400011114 ID=PGSC0003DMT400028879.v4.03 annot-version=v4.03
Sequence

ATGTGTCAAGGTCTGCCGTTGGCTGCAAGTGTGTTGGGAGGCCTCTTATGCAACAAGGAA
AAACATGAATGGCAGGCAATTCTTGATGGAAACCACCTTGTTGCAGGTGAAGATGATAAA
GGGGAAAATAGCATAAAGAAAATCCTAAAACTCAGCTATGATTATCTACCATCTCCACAT
CTGAAGAAATGTTTTGCTTACTTTGCTATGTTTCCAAAAGATTTTGAGTTTGAGAAGGAC
CAACTAATCCAACTCTGGATGGCAGAAGGGTTTCTTCGTCCATGTCAAGAGACCCCCGTG
ATGGAAGACGTCGGGAACAAGTTTTTCCAACTCTTGTTGCAATATTCCTTGCTGCAAGAT
GTTAAGATAGATGAGCTCAACAATATAACACATTGTAAAATGCATGATCTTGTGCATGAT
TTGGCTGAAGATATTTTAAAGTCTAAACTATTTGATCAAAAGAGTGTTAGAGGAGAAAAT
CTTTCTCAAGTCCGATACTTTGGATGGAACTCACCAATTCTTGAGGGTTTTAAATTGTCC
AGGTCAGGCATCAAGGAGTTATCAGCCAAAATCGGCAAGCTAATATACCTGAGGTATCTT
GATCTCTCCGACACGCAGATCGAAGCCTTGCCCAATTCCATTTGCAAGCTCTACAATTTG
CAAACATTTAGAGTCAATGACTATTCTTCACTCAGGAAGCTTCCAGAAGAAATGGCAAAT
ATGATAAGTTTGAGACACATATATTGCAGCTATCATTACAAATTTGATATGCAGATACCA
CTTAATATGGGACAATTGACTTGTGTTCAAACCCTAGAGTTTTTCAAGGTGGGTTCAGAG
AAAGGTCGTCGAATAGAAGAATTAGGTCATCTGAAAAACCTTAGAGGTGAATTGACGATC
AGAGGTCTGCAATCAGTCAGAACTAAAGAAGAGGCTCGAGCAGCATATTTACAGGAGAAA
CCAAATATCTACAAGCTGACATATTTGTGGTCCCATGATGAATCAGATGTATGTTAG