Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400028820
CDS Infomation

pacid=37479223 polypeptide=PGSC0003DMP400019597 locus=PGSC0003DMG402011095 ID=PGSC0003DMT400028820.v4.03 annot-version=v4.03
Sequence

ATGGCGTTCTCACTTCAGCTCCAACAAATGTTCCTTTCTCCCAGTAGATTTTGCTCCCAA
TCTAAATCAACGAACCCTCAAATTATTCCCAATTTAACAAGAAAACCGTCAATTCATCCA
CTTGCCTATGCTCAAAACAACGCCACTAGCAACATCGAAGCAGCCAAGAGTTCAATTAAT
TCTTCGGCGGAGGAAGTTTCGTTGCCTCCAGAATTGAGGAGAGAATTGATGCCGAAACAT
ATTGCAGTGATATTGGATGGGAATAGAAGGTGGGCAAAGAAGAGAGGATTACCGGTTGCG
TTAGGTTACGTAGCCGGTATTCGAGCTCTTAGGAACTTTGTTAAGCTCAGCTACAATTGG
GGAATTAGGGCTCTTACTCTATTTGCTTTTTCCTCTGAAAATTGGTTCCGTCCTGAAGCG
GAAGTTGATCTTTTGATGGGCTTGTTCGATAAAGTAGTGAAAGATGAACTTGAAAATCTT
GCCAGAGCAGGGATTCGAATATCTATAATTGGAGACTCCAGTAAGCTCCCCAAGTCATTG
CAGGACTTGATAGATAAAGCGGTAATGACTACTAAAGCAAACTCCCGACTTCACCTCATT
GTTGCAGTAAACTATAGTGGACAGCATGATGTTGTACAAGCTTGTCAAACCATTGCTCAA
AAAGTTAAGGATGGCAATATCGAACCCGAAGACATTAATAGTTTCCTAGTAGAACAGGAA
TTACAAACAAAATGTACTGAATTTCCAAGTCCTGATTTACTTATAAGGACTAGTGGGGAG
TTTAGACTTAGCAATTTCTTACTCTGGCAGTTGGCCTATACTGAACTCTTCTTTTCTCAT
TCACAATGGCCTGATTTTGGTGAAGCTGAGTTTTTAGAGGCTTTATCTTCTTTTCAGCAA
AGACAGAGGCGCTATGGTGGACAGAGTTCCTAG

Peptide Sequence

PEP ID

PGSC0003DMP400019597
PEP Infomation

pacid=37479223 transcript=PGSC0003DMT400028820 locus=PGSC0003DMG402011095 ID=PGSC0003DMT400028820.v4.03 annot-version=v4.03
Sequence

MAFSLQLQQMFLSPSRFCSQSKSTNPQIIPNLTRKPSIHPLAYAQNNATSNIEAAKSSIN
SSAEEVSLPPELRRELMPKHIAVILDGNRRWAKKRGLPVALGYVAGIRALRNFVKLSYNW
GIRALTLFAFSSENWFRPEAEVDLLMGLFDKVVKDELENLARAGIRISIIGDSSKLPKSL
QDLIDKAVMTTKANSRLHLIVAVNYSGQHDVVQACQTIAQKVKDGNIEPEDINSFLVEQE
LQTKCTEFPSPDLLIRTSGEFRLSNFLLWQLAYTELFFSHSQWPDFGEAEFLEALSSFQQ
RQRRYGGQSS*

Transcript Sequence

Transcript ID

PGSC0003DMT400028820
Transcript Infomation

pacid=37479223 locus=PGSC0003DMG402011095 ID=PGSC0003DMT400028820.v4.03 annot-version=v4.03
Sequence

ATGGCGTTCTCACTTCAGCTCCAACAAATGTTCCTTTCTCCCAGTAGATTTTGCTCCCAA
TCTAAATCAACGAACCCTCAAATTATTCCCAATTTAACAAGAAAACCGTCAATTCATCCA
CTTGCCTATGCTCAAAACAACGCCACTAGCAACATCGAAGCAGCCAAGAGTTCAATTAAT
TCTTCGGCGGAGGAAGTTTCGTTGCCTCCAGAATTGAGGAGAGAATTGATGCCGAAACAT
ATTGCAGTGATATTGGATGGGAATAGAAGGTGGGCAAAGAAGAGAGGATTACCGGTTGCG
TTAGGTTACGTAGCCGGTATTCGAGCTCTTAGGAACTTTGTTAAGCTCAGCTACAATTGG
GGAATTAGGGCTCTTACTCTATTTGCTTTTTCCTCTGAAAATTGGTTCCGTCCTGAAGCG
GAAGTTGATCTTTTGATGGGCTTGTTCGATAAAGTAGTGAAAGATGAACTTGAAAATCTT
GCCAGAGCAGGGATTCGAATATCTATAATTGGAGACTCCAGTAAGCTCCCCAAGTCATTG
CAGGACTTGATAGATAAAGCGGTAATGACTACTAAAGCAAACTCCCGACTTCACCTCATT
GTTGCAGTAAACTATAGTGGACAGCATGATGTTGTACAAGCTTGTCAAACCATTGCTCAA
AAAGTTAAGGATGGCAATATCGAACCCGAAGACATTAATAGTTTCCTAGTAGAACAGGAA
TTACAAACAAAATGTACTGAATTTCCAAGTCCTGATTTACTTATAAGGACTAGTGGGGAG
TTTAGACTTAGCAATTTCTTACTCTGGCAGTTGGCCTATACTGAACTCTTCTTTTCTCAT
TCACAATGGCCTGATTTTGGTGAAGCTGAGTTTTTAGAGGCTTTATCTTCTTTTCAGCAA
AGACAGAGGCGCTATGGTGGACAGAGTTCCTAG