Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400028817
CDS Infomation

pacid=37479231 polypeptide=PGSC0003DMP400019594 locus=PGSC0003DMG401011095 ID=PGSC0003DMT400028817.v4.03 annot-version=v4.03
Sequence

ATGGCGTTTTCACTTCAGCTCCAACAAATCTTCCCTTCCCCCATTAAATTTTGCTCCCAA
CCAAAATCACCAAACCCTCAAATTTTCCCCAATTTAACAAAAAGACTGTCAATTCATCCA
CTTGCCTCTGCTCAAAACAACGCCACTAGCAACATTGACCACAATTATATCGTCACGGAC
AAGAGTTCAATCAATGAAGAAGAAGTGTCGTTGCCTCCAGAATTGAGGAGAGAACTGATG
CCGAAACATATTGCAGTGATAATGGATGGGAATAGAAGGTGGGCAAAGAAGAGAGGATTA
CCGGTTGCGTTAGGTTACGCAGCCGGTATTCGAGCTCTTAGGAACTTTGTTAAACTCAGC
TACAATTGGGGAATTAGGGCTCTTACTCTATTTGCTTTTTCCTCTGAAAATTGGTTCCGT
CCTGAAGCGGAAGTTGATCTTTTGATGGGCTTGTTCGATAAAGTACTGAAAGATGAAGTT
GAAAATCTTGCCAGAGCAGGGATTCGATTATCTATAATTGGCGACTCCAGTAAGCTCCCC
AAGTCATTGCAGGATTTAATAGATAAAGCGGTAATGACTACTAAAGCAAACTCGCGACTT
CATATCCTCGTTGCAATTAACTATAGTGGACAGTATGATGTTGTACAAGCTTGTCAAACC
ATTGCTCAAAAAGTTAAGGATGGTACTATCGAACCCGAAGACATTAATAGTTTCCTAGTA
GAACAGGAATTACTAACAAAATGTACTGAATTTCCAAGTCCTGATTTACTTATAAGGACT
AGTGGGGAGCTTAGACTTAGCAATTTCTTACTCTGGCAGTTGGCCTATACTGAGCTCTTC
TTTTCTCATTCACAATGGCCTGATTTTGGTGAAGCTGAATTTTTAGAGGCTTTATCTTCT
TTTCAGCAAAGACAGAGGCGCTACGGTGGACAGAGTTCCTAG

Peptide Sequence

PEP ID

PGSC0003DMP400019594
PEP Infomation

pacid=37479231 transcript=PGSC0003DMT400028817 locus=PGSC0003DMG401011095 ID=PGSC0003DMT400028817.v4.03 annot-version=v4.03
Sequence

MAFSLQLQQIFPSPIKFCSQPKSPNPQIFPNLTKRLSIHPLASAQNNATSNIDHNYIVTD
KSSINEEEVSLPPELRRELMPKHIAVIMDGNRRWAKKRGLPVALGYAAGIRALRNFVKLS
YNWGIRALTLFAFSSENWFRPEAEVDLLMGLFDKVLKDEVENLARAGIRLSIIGDSSKLP
KSLQDLIDKAVMTTKANSRLHILVAINYSGQYDVVQACQTIAQKVKDGTIEPEDINSFLV
EQELLTKCTEFPSPDLLIRTSGELRLSNFLLWQLAYTELFFSHSQWPDFGEAEFLEALSS
FQQRQRRYGGQSS*

Transcript Sequence

Transcript ID

PGSC0003DMT400028817
Transcript Infomation

pacid=37479231 locus=PGSC0003DMG401011095 ID=PGSC0003DMT400028817.v4.03 annot-version=v4.03
Sequence

ATGGCGTTTTCACTTCAGCTCCAACAAATCTTCCCTTCCCCCATTAAATTTTGCTCCCAA
CCAAAATCACCAAACCCTCAAATTTTCCCCAATTTAACAAAAAGACTGTCAATTCATCCA
CTTGCCTCTGCTCAAAACAACGCCACTAGCAACATTGACCACAATTATATCGTCACGGAC
AAGAGTTCAATCAATGAAGAAGAAGTGTCGTTGCCTCCAGAATTGAGGAGAGAACTGATG
CCGAAACATATTGCAGTGATAATGGATGGGAATAGAAGGTGGGCAAAGAAGAGAGGATTA
CCGGTTGCGTTAGGTTACGCAGCCGGTATTCGAGCTCTTAGGAACTTTGTTAAACTCAGC
TACAATTGGGGAATTAGGGCTCTTACTCTATTTGCTTTTTCCTCTGAAAATTGGTTCCGT
CCTGAAGCGGAAGTTGATCTTTTGATGGGCTTGTTCGATAAAGTACTGAAAGATGAAGTT
GAAAATCTTGCCAGAGCAGGGATTCGATTATCTATAATTGGCGACTCCAGTAAGCTCCCC
AAGTCATTGCAGGATTTAATAGATAAAGCGGTAATGACTACTAAAGCAAACTCGCGACTT
CATATCCTCGTTGCAATTAACTATAGTGGACAGTATGATGTTGTACAAGCTTGTCAAACC
ATTGCTCAAAAAGTTAAGGATGGTACTATCGAACCCGAAGACATTAATAGTTTCCTAGTA
GAACAGGAATTACTAACAAAATGTACTGAATTTCCAAGTCCTGATTTACTTATAAGGACT
AGTGGGGAGCTTAGACTTAGCAATTTCTTACTCTGGCAGTTGGCCTATACTGAGCTCTTC
TTTTCTCATTCACAATGGCCTGATTTTGGTGAAGCTGAATTTTTAGAGGCTTTATCTTCT
TTTCAGCAAAGACAGAGGCGCTACGGTGGACAGAGTTCCTAG