Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400028801
CDS Infomation

pacid=37478079 polypeptide=PGSC0003DMP400019583 locus=PGSC0003DMG400011089 ID=PGSC0003DMT400028801.v4.03 annot-version=v4.03
Sequence

ATGTCAACCGGTGGCACCGCCACCAATTCCGCCAGCGGTAGTCCCAGAGTGGCCGGCAGC
GGACTCACCATCCACCACCGACGCCCGGTTATGGAGAACGACCCTGAAAAATCATCAGAT
CATATGCAAATCGGATTTGATAATTACTATGGTGATAATAACAATAATGCAAATATTATT
AACGCTGGTAGCGGAAACCTCCCTTATCACCACCACCATCATCATCCTCGTACAATAGTA
GGATATTTATTAGCGTGTAAATGGGTGCCGGAAAGTTTGATTTTTAGAGTAGAAGAATGG
TTATTGAGTTTTGGTTCAATTATGGCGTGTTTAGGATCAAGAAATAATATGGGTCGTACG
ATTTTGGGGATATTGTTGATTTTGGTGATGATTTCTGTATTTTTTAAGTTTTCAATCGTT
ATGAATGGTGATGTAAATGGGAATCTTATGAGTAAAGATAATGGCCTTTTTGTTGTTCAG
AATTTTAAGAATGATTGGGTTAATGCTCAAAAAGTTGTTTCTGAAACAGAGTCCTCTGTT
TCTGTTTCGTCTTCTGGTGGAGTTGCCCGGAAACGCCAGATGAAGCAGTTGCCGGTACCA
GAAATATGGATGAAGCCACCTAGTGATACTTACTACAAATGCATTGCTCGGCCTAGGGAT
CGAATAAGAACTGGATCATCGACTAATGGATATGTCTTGGTTCATGCCAATGGAGGATTA
AACCAGATGAGAACAGGGATATGTGATATGGTGGCTATTGCAAAAATTTTGAATGCCACT
TTGGTTCTTCCTTCTCTTGATCATGAATCCTTTTGGACAGATCCCAGTGATTTTAAAGAT
ATTTTTGACTGGAGACGCTTCATTGACGTTTTAAAGGATGATATTGAGATTGTTGAATCT
TTGCCACCAAAATATGCAGCTGTGTCCCCTATTGAGAAGGCACCGGTCTCTTGGTCAAAG
GCTAGTTACTATAGAGGAGAGGTTCTTCCTTTACTAAAGAAGCACAAGGTGATACAATTT
ACGCATACAGATTCAAGGCTTGCTAACAATGGCTTGGCATCCTCTATTCAGAGGCTTCGC
TGTCGAGCAAATTATGAGGCTCTACGGTACACAAATGAGATCAAGGAGCTTGGAAAGAGG
TTGGTGGATAGACTTAGAGACAATGGCAGACCGTACATTGCTCTCCACTTAAGATATGAA
AAAGACATGTTAGCCTTTACTGGCTGCAGCAACAATTTAACTGCTCAAGAGGCTGAAGAA
CTTCGTTATATGAGGTATCAAGTGAAACACTGGAAAGAGAAAGAGATAGACGGCAATGAG
AAACGACTACAAGGGGGCTGCCCTATGTCGCCTAGGGAGGCTGCCTTGTTTCTTAAAGCA
ATGGGCTATCCCTCCACGACCAGGATCTATATTGTCGCTGGGGAAATTTATGGCAACAAC
AGCATGGATGCATTTCGAAATGAGTATCCTAATGTTTTCTCTCACTCAACTCTCACAACA
ACGGAAGAACTACAGACTTTCAGGCATTATCAAAACCGTCTTGCTGCCTTAGATTATCTC
GTAGCCCTTGAAAGTGATGTCTTTGTTTACACATATGATGGCAATATGGCAAAGGCCGTG
CAAGGGCATAGAAGGTTTGAAGGATTTCGAAAGACCATAAGCCCCGACAGACTGAATGTT
GTAAGATTGATTGATTTGTTGGATAAGGGTGCGATCACTCAAGAAGAGTTTACTTCCGAG
GTCAAGGTTTTACATTCCAACAGATTAGGAGCACCTTACTCTAGAGAAGCGGGAGAATCT
CCAAGATTAGAAGAGAACTTTTATGCAAATCCTTTTCCAGGGTGTATTTGTGATAGATCT
TTGATGGTAGCGAACAAACATCAAATTAACAAGAGACCGAGTTTGAATGCTGCTGCACAA
AGATAA

Peptide Sequence

PEP ID

PGSC0003DMP400019583
PEP Infomation

pacid=37478079 transcript=PGSC0003DMT400028801 locus=PGSC0003DMG400011089 ID=PGSC0003DMT400028801.v4.03 annot-version=v4.03
Sequence

MSTGGTATNSASGSPRVAGSGLTIHHRRPVMENDPEKSSDHMQIGFDNYYGDNNNNANII
NAGSGNLPYHHHHHHPRTIVGYLLACKWVPESLIFRVEEWLLSFGSIMACLGSRNNMGRT
ILGILLILVMISVFFKFSIVMNGDVNGNLMSKDNGLFVVQNFKNDWVNAQKVVSETESSV
SVSSSGGVARKRQMKQLPVPEIWMKPPSDTYYKCIARPRDRIRTGSSTNGYVLVHANGGL
NQMRTGICDMVAIAKILNATLVLPSLDHESFWTDPSDFKDIFDWRRFIDVLKDDIEIVES
LPPKYAAVSPIEKAPVSWSKASYYRGEVLPLLKKHKVIQFTHTDSRLANNGLASSIQRLR
CRANYEALRYTNEIKELGKRLVDRLRDNGRPYIALHLRYEKDMLAFTGCSNNLTAQEAEE
LRYMRYQVKHWKEKEIDGNEKRLQGGCPMSPREAALFLKAMGYPSTTRIYIVAGEIYGNN
SMDAFRNEYPNVFSHSTLTTTEELQTFRHYQNRLAALDYLVALESDVFVYTYDGNMAKAV
QGHRRFEGFRKTISPDRLNVVRLIDLLDKGAITQEEFTSEVKVLHSNRLGAPYSREAGES
PRLEENFYANPFPGCICDRSLMVANKHQINKRPSLNAAAQR*

Transcript Sequence

Transcript ID

PGSC0003DMT400028801
Transcript Infomation

pacid=37478079 locus=PGSC0003DMG400011089 ID=PGSC0003DMT400028801.v4.03 annot-version=v4.03
Sequence

ATGTCAACCGGTGGCACCGCCACCAATTCCGCCAGCGGTAGTCCCAGAGTGGCCGGCAGC
GGACTCACCATCCACCACCGACGCCCGGTTATGGAGAACGACCCTGAAAAATCATCAGAT
CATATGCAAATCGGATTTGATAATTACTATGGTGATAATAACAATAATGCAAATATTATT
AACGCTGGTAGCGGAAACCTCCCTTATCACCACCACCATCATCATCCTCGTACAATAGTA
GGATATTTATTAGCGTGTAAATGGGTGCCGGAAAGTTTGATTTTTAGAGTAGAAGAATGG
TTATTGAGTTTTGGTTCAATTATGGCGTGTTTAGGATCAAGAAATAATATGGGTCGTACG
ATTTTGGGGATATTGTTGATTTTGGTGATGATTTCTGTATTTTTTAAGTTTTCAATCGTT
ATGAATGGTGATGTAAATGGGAATCTTATGAGTAAAGATAATGGCCTTTTTGTTGTTCAG
AATTTTAAGAATGATTGGGTTAATGCTCAAAAAGTTGTTTCTGAAACAGAGTCCTCTGTT
TCTGTTTCGTCTTCTGGTGGAGTTGCCCGGAAACGCCAGATGAAGCAGTTGCCGGTACCA
GAAATATGGATGAAGCCACCTAGTGATACTTACTACAAATGCATTGCTCGGCCTAGGGAT
CGAATAAGAACTGGATCATCGACTAATGGATATGTCTTGGTTCATGCCAATGGAGGATTA
AACCAGATGAGAACAGGGATATGTGATATGGTGGCTATTGCAAAAATTTTGAATGCCACT
TTGGTTCTTCCTTCTCTTGATCATGAATCCTTTTGGACAGATCCCAGTGATTTTAAAGAT
ATTTTTGACTGGAGACGCTTCATTGACGTTTTAAAGGATGATATTGAGATTGTTGAATCT
TTGCCACCAAAATATGCAGCTGTGTCCCCTATTGAGAAGGCACCGGTCTCTTGGTCAAAG
GCTAGTTACTATAGAGGAGAGGTTCTTCCTTTACTAAAGAAGCACAAGGTGATACAATTT
ACGCATACAGATTCAAGGCTTGCTAACAATGGCTTGGCATCCTCTATTCAGAGGCTTCGC
TGTCGAGCAAATTATGAGGCTCTACGGTACACAAATGAGATCAAGGAGCTTGGAAAGAGG
TTGGTGGATAGACTTAGAGACAATGGCAGACCGTACATTGCTCTCCACTTAAGATATGAA
AAAGACATGTTAGCCTTTACTGGCTGCAGCAACAATTTAACTGCTCAAGAGGCTGAAGAA
CTTCGTTATATGAGGTATCAAGTGAAACACTGGAAAGAGAAAGAGATAGACGGCAATGAG
AAACGACTACAAGGGGGCTGCCCTATGTCGCCTAGGGAGGCTGCCTTGTTTCTTAAAGCA
ATGGGCTATCCCTCCACGACCAGGATCTATATTGTCGCTGGGGAAATTTATGGCAACAAC
AGCATGGATGCATTTCGAAATGAGTATCCTAATGTTTTCTCTCACTCAACTCTCACAACA
ACGGAAGAACTACAGACTTTCAGGCATTATCAAAACCGTCTTGCTGCCTTAGATTATCTC
GTAGCCCTTGAAAGTGATGTCTTTGTTTACACATATGATGGCAATATGGCAAAGGCCGTG
CAAGGGCATAGAAGGTTTGAAGGATTTCGAAAGACCATAAGCCCCGACAGACTGAATGTT
GTAAGATTGATTGATTTGTTGGATAAGGGTGCGATCACTCAAGAAGAGTTTACTTCCGAG
GTCAAGGTTTTACATTCCAACAGATTAGGAGCACCTTACTCTAGAGAAGCGGGAGAATCT
CCAAGATTAGAAGAGAACTTTTATGCAAATCCTTTTCCAGGGTGTATTTGTGATAGATCT
TTGATGGTAGCGAACAAACATCAAATTAACAAGAGACCGAGTTTGAATGCTGCTGCACAA
AGATAA