Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400028800
CDS Infomation

pacid=37479149 polypeptide=PGSC0003DMP400019582 locus=PGSC0003DMG400011088 ID=PGSC0003DMT400028800.v4.03 annot-version=v4.03
Sequence

ATGCGTGAGATTCTTCATATTCAAGGTGGACAATGCGGCAACCAAATCGGTGCCAAGTTT
TGGGAAGTTGTTTGTGCTGAACACGGCATTGATTCCACCGGAAGATATGCCGGAGATGCT
GATCTTCAGCTTGAGAGAATCAATGTCTATTATAATGAAGCTACTTGTGGAAGGTTTGTT
CCGAGGGCGGTTCTTATGGATCTGGAGCCGGGTACCATGGATAGTATTAGATCTGGTACT
TATGGCCAGATCTTTCGTCCTGATAACTTTGTGTTTGGACAATCTGGTGCTGGTAATAAT
TGGGCGAAAGGGCATTACACTGAAGGCGCTGAATTGATTGATTCTGTTCTTGATGTGGTT
CGTAAGGAAGCTGAAAACTGTGATTGCCTTCAAGGGTTTCAAGTTTGTCATTCATTGGGT
GGAGGAACAGGTTCTGGTATGGGTACCCTTTTGATTTCTAAGATCAGAGAGGAATACCCA
GACCGAATGATGCTTACGTTTTCGGTTTTCCCTTCCCCTAAGGTATCCGACACCGTCGTT
GAACCTTACAATGCTACTCTGTCTGTTCATCAATTGGTTGAAAATGCTGATGAATGTATG
GTTCTTGACAATGAGGCTCTATATGATATTTGCTTCAGAACCTTGAAGCTTACCACCCCC
AGCTTTGGAGATTTGAATCATTTGATATCAGCAACAATGTCTGGTGTTACCTGTTGTTTG
CGTTTCCCCGGGCAGTTGAACTCTGATCTCCGTAAGCTGGCTGTCAATTTGATTCCATTC
CCAAGGCTCCATTTCTTTATGGTTGGGTTTGCGCCTTTGACTTCCCGTGGTTCACAGCAA
TACAGAGCTTTGACTGTCCCCGAGCTTACACAGCAAATGTGGGATGCCAAGAACATGATG
TGCGCAGCTGACCCTCGCCACGGGAGGTACTTGACTGCCTCAGCTATGTTCAGGGGCAAA
ATGAGCACGAAAGAGGTCGATGAGCAAATGCTCAATGTGCAGAACAAGAACTCATCCTAC
TTTGTTGAGTGGATCCCTAACAATGTGAAATCAACTGTTTGTGATATCCCACCTACTGGA
CTTAAGATGGCCTCCACCTTCATTGGTAACTCAACATCAATTCAGGAGATGTTTAGGCGT
GTAAGTGAACAGTTCACTGCTATGTTCAGGAGAAAGGCTTTCTTGCATTGGTACACTGGT
GAAGGAATGGACGAGATGGAGTTTACCGAAGCTGAAAGTAACATGAACGATCTCGTGTCG
GAGTATCAGCAGTACCAAGATGCCACTGCTGATGAAGAGGAGGGAGAGTATTATGAGGAT
GAAGATGATGCTCAAGAGGAGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400019582
PEP Infomation

pacid=37479149 transcript=PGSC0003DMT400028800 locus=PGSC0003DMG400011088 ID=PGSC0003DMT400028800.v4.03 annot-version=v4.03
Sequence

MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYAGDADLQLERINVYYNEATCGRFV
PRAVLMDLEPGTMDSIRSGTYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV
RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV
EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL
RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMM
CAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSTVCDIPPTG
LKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
EYQQYQDATADEEEGEYYEDEDDAQEE*

Transcript Sequence

Transcript ID

PGSC0003DMT400028800
Transcript Infomation

pacid=37479149 locus=PGSC0003DMG400011088 ID=PGSC0003DMT400028800.v4.03 annot-version=v4.03
Sequence

ATGCGTGAGATTCTTCATATTCAAGGTGGACAATGCGGCAACCAAATCGGTGCCAAGTTT
TGGGAAGTTGTTTGTGCTGAACACGGCATTGATTCCACCGGAAGATATGCCGGAGATGCT
GATCTTCAGCTTGAGAGAATCAATGTCTATTATAATGAAGCTACTTGTGGAAGGTTTGTT
CCGAGGGCGGTTCTTATGGATCTGGAGCCGGGTACCATGGATAGTATTAGATCTGGTACT
TATGGCCAGATCTTTCGTCCTGATAACTTTGTGTTTGGACAATCTGGTGCTGGTAATAAT
TGGGCGAAAGGGCATTACACTGAAGGCGCTGAATTGATTGATTCTGTTCTTGATGTGGTT
CGTAAGGAAGCTGAAAACTGTGATTGCCTTCAAGGGTTTCAAGTTTGTCATTCATTGGGT
GGAGGAACAGGTTCTGGTATGGGTACCCTTTTGATTTCTAAGATCAGAGAGGAATACCCA
GACCGAATGATGCTTACGTTTTCGGTTTTCCCTTCCCCTAAGGTATCCGACACCGTCGTT
GAACCTTACAATGCTACTCTGTCTGTTCATCAATTGGTTGAAAATGCTGATGAATGTATG
GTTCTTGACAATGAGGCTCTATATGATATTTGCTTCAGAACCTTGAAGCTTACCACCCCC
AGCTTTGGAGATTTGAATCATTTGATATCAGCAACAATGTCTGGTGTTACCTGTTGTTTG
CGTTTCCCCGGGCAGTTGAACTCTGATCTCCGTAAGCTGGCTGTCAATTTGATTCCATTC
CCAAGGCTCCATTTCTTTATGGTTGGGTTTGCGCCTTTGACTTCCCGTGGTTCACAGCAA
TACAGAGCTTTGACTGTCCCCGAGCTTACACAGCAAATGTGGGATGCCAAGAACATGATG
TGCGCAGCTGACCCTCGCCACGGGAGGTACTTGACTGCCTCAGCTATGTTCAGGGGCAAA
ATGAGCACGAAAGAGGTCGATGAGCAAATGCTCAATGTGCAGAACAAGAACTCATCCTAC
TTTGTTGAGTGGATCCCTAACAATGTGAAATCAACTGTTTGTGATATCCCACCTACTGGA
CTTAAGATGGCCTCCACCTTCATTGGTAACTCAACATCAATTCAGGAGATGTTTAGGCGT
GTAAGTGAACAGTTCACTGCTATGTTCAGGAGAAAGGCTTTCTTGCATTGGTACACTGGT
GAAGGAATGGACGAGATGGAGTTTACCGAAGCTGAAAGTAACATGAACGATCTCGTGTCG
GAGTATCAGCAGTACCAAGATGCCACTGCTGATGAAGAGGAGGGAGAGTATTATGAGGAT
GAAGATGATGCTCAAGAGGAGTAA