Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400028797
CDS Infomation

pacid=37477493 polypeptide=PGSC0003DMP400019579 locus=PGSC0003DMG400011085 ID=PGSC0003DMT400028797.v4.03 annot-version=v4.03
Sequence

ATGGATAAAATAAAGAGAAGAGAAGAATTAGTAGAAATTGATGAGCAAAAATGGGTTAAT
GATTCTTCTTTGGATCATAAAGGAAGAGTTCCTCTCAGGGGTTCAACTGGTGTATGGAAA
GCCTCTCTCTTCATTATTGTAATTGAATTCAGTGAGAGGCTTAGTTACTTTGGATTAGCC
ACAAGTTTGATTATTTACTTAACAAAAGTCATCCATCAAGACCTCAAAACAGCTGCAAAA
AGTGTCAATTACTGGTCTGGTGTCACCACTTTGATGCCATTGCTTGGAGGATTTCTTGCT
GATGCATTCTTGGGAAGATTCTCCACAGTTCTTGCCTCTTCCATTGTCTATTTGCTGGGC
TTGATTCTCTTGACAATGTCTAGAGTGATCCCGAGTTTGAAACCTTGCGACACTGACCTA
TGTCACAAACATGTCCACAAGATGATTTTCTTCCTCGCGATCTACTTAATCTCAATTGGT
ACCGGAGGTCACAAGCCTTCTCTTGAGAGCTTCGGAGCTGACCAATTTGATGATGACTAT
CCTGAAGAAAGAAAGAAGAAAATGTCCTTTTTCAACTGGTGGAATTTTGGACTCTGTTGT
GGACTACTACTTGGTGCTACTCTGATTGTTTATGTACAAGACCGAGTTAGCTGGGCTATG
GCGGATTTGATCCTTACACTAGTAATGGCTTCTAGTATAATCATTTTCGTTGCAGGTAGA
CCGTTCTATCGTTATAGAAAGGCAACTGGAAGTCCCTTAACACCAATGTTACAAGTGTTT
GTAGCTGCAATAAGAAAAAAAAATCTTCTTTTTCCTGCCAATCCTTCTCATTTATATGAA
ATTCCCAAATCCGACACTAGCCAAAGGAGGCTTTTATGTCACACCGAAAAGCTCAAGTTC
CTTGATAAAGCTGCAATTGTTGATGGCACACAAGATTCAGTAGTACAGCAACAGAATCCA
TGGAGACTTGCAACTGTAACCAAAGTGGAAGAATTGAAATTAGTTATCAACATGATTCCT
ATTTGGCTAACAACTATACCATTTGGTATTTGTGTGGCACAAACCACGACATTTTTCATC
AAACAAGGCGTGACTCTAGACAGGAAGATAGTTCACAATTTTGAAATTCCCCCTGCATCA
ATATTCGCGTTAGCTGCTATTGGCATGATAATATCCATCACTATCTATGACAAAATCCTC
GTGCCTGTCTTAAGACGGGCAACAGGAAACGAGAGAGGGATTAGTATCCTCCAAAGGATT
GGTTTTGGAATGATCTTCTCTGTTTCTACTATGATCGTTGCAGCTTTAGTCGAAAGGAAA
AGACTGAATCTTGTTCACAAGAATCCACTCAAAGGCTCGAGTACAATGAGTGTGTTTTGG
TTAGCACCACAATTCCTTATAATTGGAATAGGAGATGGATTTACCTTAGTTGGATTACAA
GAATACTTCTATGATCAAGTGCCTGATTCAATGAGAAGTTTAGGCATTGCATTTTACCTT
AGTGTAATTGGTGCTGCAAATTTTGTTAGCAGCCTATTGATAACAATTGTGGATCATATA
ACAGAAAAAAATGGCAAGAGTTGGTTTGGGAAGGATCTGAATAATAGTCGTCTCGACTAT
TTCTACTGGTTGTTAGCTATCATGACAGCAGTAAATTTGTGTGTCTATGTCATTGTTGCG
AGGAATTATTCGTACAAGAATGTTCACTGTAAGGCAACTATATCTGTGGCTGATTGCAAC
GATACAGATGATCGCGAAGCAATGGCTTAG

Peptide Sequence

PEP ID

PGSC0003DMP400019579
PEP Infomation

pacid=37477493 transcript=PGSC0003DMT400028797 locus=PGSC0003DMG400011085 ID=PGSC0003DMT400028797.v4.03 annot-version=v4.03
Sequence

MDKIKRREELVEIDEQKWVNDSSLDHKGRVPLRGSTGVWKASLFIIVIEFSERLSYFGLA
TSLIIYLTKVIHQDLKTAAKSVNYWSGVTTLMPLLGGFLADAFLGRFSTVLASSIVYLLG
LILLTMSRVIPSLKPCDTDLCHKHVHKMIFFLAIYLISIGTGGHKPSLESFGADQFDDDY
PEERKKKMSFFNWWNFGLCCGLLLGATLIVYVQDRVSWAMADLILTLVMASSIIIFVAGR
PFYRYRKATGSPLTPMLQVFVAAIRKKNLLFPANPSHLYEIPKSDTSQRRLLCHTEKLKF
LDKAAIVDGTQDSVVQQQNPWRLATVTKVEELKLVINMIPIWLTTIPFGICVAQTTTFFI
KQGVTLDRKIVHNFEIPPASIFALAAIGMIISITIYDKILVPVLRRATGNERGISILQRI
GFGMIFSVSTMIVAALVERKRLNLVHKNPLKGSSTMSVFWLAPQFLIIGIGDGFTLVGLQ
EYFYDQVPDSMRSLGIAFYLSVIGAANFVSSLLITIVDHITEKNGKSWFGKDLNNSRLDY
FYWLLAIMTAVNLCVYVIVARNYSYKNVHCKATISVADCNDTDDREAMA*

Transcript Sequence

Transcript ID

PGSC0003DMT400028797
Transcript Infomation

pacid=37477493 locus=PGSC0003DMG400011085 ID=PGSC0003DMT400028797.v4.03 annot-version=v4.03
Sequence

ATGGATAAAATAAAGAGAAGAGAAGAATTAGTAGAAATTGATGAGCAAAAATGGGTTAAT
GATTCTTCTTTGGATCATAAAGGAAGAGTTCCTCTCAGGGGTTCAACTGGTGTATGGAAA
GCCTCTCTCTTCATTATTGTAATTGAATTCAGTGAGAGGCTTAGTTACTTTGGATTAGCC
ACAAGTTTGATTATTTACTTAACAAAAGTCATCCATCAAGACCTCAAAACAGCTGCAAAA
AGTGTCAATTACTGGTCTGGTGTCACCACTTTGATGCCATTGCTTGGAGGATTTCTTGCT
GATGCATTCTTGGGAAGATTCTCCACAGTTCTTGCCTCTTCCATTGTCTATTTGCTGGGC
TTGATTCTCTTGACAATGTCTAGAGTGATCCCGAGTTTGAAACCTTGCGACACTGACCTA
TGTCACAAACATGTCCACAAGATGATTTTCTTCCTCGCGATCTACTTAATCTCAATTGGT
ACCGGAGGTCACAAGCCTTCTCTTGAGAGCTTCGGAGCTGACCAATTTGATGATGACTAT
CCTGAAGAAAGAAAGAAGAAAATGTCCTTTTTCAACTGGTGGAATTTTGGACTCTGTTGT
GGACTACTACTTGGTGCTACTCTGATTGTTTATGTACAAGACCGAGTTAGCTGGGCTATG
GCGGATTTGATCCTTACACTAGTAATGGCTTCTAGTATAATCATTTTCGTTGCAGGTAGA
CCGTTCTATCGTTATAGAAAGGCAACTGGAAGTCCCTTAACACCAATGTTACAAGTGTTT
GTAGCTGCAATAAGAAAAAAAAATCTTCTTTTTCCTGCCAATCCTTCTCATTTATATGAA
ATTCCCAAATCCGACACTAGCCAAAGGAGGCTTTTATGTCACACCGAAAAGCTCAAGTTC
CTTGATAAAGCTGCAATTGTTGATGGCACACAAGATTCAGTAGTACAGCAACAGAATCCA
TGGAGACTTGCAACTGTAACCAAAGTGGAAGAATTGAAATTAGTTATCAACATGATTCCT
ATTTGGCTAACAACTATACCATTTGGTATTTGTGTGGCACAAACCACGACATTTTTCATC
AAACAAGGCGTGACTCTAGACAGGAAGATAGTTCACAATTTTGAAATTCCCCCTGCATCA
ATATTCGCGTTAGCTGCTATTGGCATGATAATATCCATCACTATCTATGACAAAATCCTC
GTGCCTGTCTTAAGACGGGCAACAGGAAACGAGAGAGGGATTAGTATCCTCCAAAGGATT
GGTTTTGGAATGATCTTCTCTGTTTCTACTATGATCGTTGCAGCTTTAGTCGAAAGGAAA
AGACTGAATCTTGTTCACAAGAATCCACTCAAAGGCTCGAGTACAATGAGTGTGTTTTGG
TTAGCACCACAATTCCTTATAATTGGAATAGGAGATGGATTTACCTTAGTTGGATTACAA
GAATACTTCTATGATCAAGTGCCTGATTCAATGAGAAGTTTAGGCATTGCATTTTACCTT
AGTGTAATTGGTGCTGCAAATTTTGTTAGCAGCCTATTGATAACAATTGTGGATCATATA
ACAGAAAAAAATGGCAAGAGTTGGTTTGGGAAGGATCTGAATAATAGTCGTCTCGACTAT
TTCTACTGGTTGTTAGCTATCATGACAGCAGTAAATTTGTGTGTCTATGTCATTGTTGCG
AGGAATTATTCGTACAAGAATGTTCACTGTAAGGCAACTATATCTGTGGCTGATTGCAAC
GATACAGATGATCGCGAAGCAATGGCTTAG