Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400028793
CDS Infomation

pacid=37479644 polypeptide=PGSC0003DMP400019576 locus=PGSC0003DMG400011083 ID=PGSC0003DMT400028793.v4.03 annot-version=v4.03
Sequence

ATGGATAAGATAAATGTGGAAATGGAGCAGATAACGAGAGCAGAATCAGTAGAAATGGAT
GATCAAAAACTGGTTTATGATTCTTCGGTTGATCATAAAGGACGAGTTCCTCTTAGGAGT
TCAACTGGTGTATGGAAGGCCTCACTCTTTATTATCGTGATTGAATTCAGTGAGAGGCTG
AGTTTCTTTGGAATAGCTACGAGTTTGATTATGTACTTAACAAAAGTCATCCATCAAGAC
CTCAAAACAGCAGCAAAAAGTGTCAATTACTGGACAGGAGTCACTACCTTGATGCCATTG
CTGGGAGGCTTTCTCGCTGATGCATACTTGGGACGATTCTCCACCGTTCTTCTCTCTTCC
ACGGTCTACTTCCTGGGCTTGCTTCTATTGACAATGTCTAGAGTGGTCCCGAGCTTAAAA
CCTTGTGAGAGTGACCTCTGTGATACACGGAGGAATGTCCATGAGCCAATCTTCTTCCTA
GCAATCTACTTAATCTCTGTTGGAACCGGAGGACACAAGCCTTCTCTTGAGAGCTTTGGA
GCTGATCAGTTTGATGATGAAAATCCTGAAGAAAGAAGGAAAAAAATGTCATTTTTCAAT
TGGTGGAACTTTGGGCTATGCTGTGGACTATTACTTGGTGTTACTCTTATCGTTTATGTA
CAAGAGCATGTTAGCTGGGCCATGGCAGATGTAATACTCACACTAGTTATGGCTTCTAGT
ATAGCCATCTTCTATGCAGGGAAGCCAGTGTATCGTTTTAGGAAGACGACTGGAAGTCCA
TTAACACCCATGCTAAACGTGCTCGTAGCTGCAATTCGGAAAAGAAGCCTTCAACTTCCT
TCAGATCCTTTTCATCTACATGAAGTTCCCAAGTCAGAAACTACCCAAAGGAGGCTCTTA
GGCCACACCAAAAGGCTAAAGTTCCTTGATAAAGCAGCAATCCTAGATCAAACTCAAGAT
TCGACAGAACAGCAACGGAATCCGTGGAAACTTGCAACTGTCACCAATGTGGAAGAACTG
AAGCTAATTATCAACATGATACCTATTTGGCTAACCACTTTACCGTTTGGTATATGCGTA
GCACAAGCTGCAACTTTTTTCTTAAAACAAGGCGTGACAATGAACCGGAGGATCATTCAC
AATTTCGAGATTCCCCCAGCCTCAATTTATGCCCTGACAGCTGTTGGCATGATAATATCT
GTTGCTTTCTATGACAAAATCCTTGTACCTTTCCTGAGAAGGACAACAGGAAATGAGAGG
GGCATAAATATTCTCCAAAGGATCGGTATTGGAATGATCTTCTCGATCTCTACTATGATC
GTTGCAGCTTTAGTCGAAAGAAAAAGACTGAATCTTGTTGACAAAAATCCACTCGAAGGT
TCGAGTTCAATGAGTGTGTTTTGGCTAGCCCCACAATTCCTTATCCTTGGAATAGCAGAT
GGATTTGCCTTAGTGGGATTGCAAGAATTCTTCTATGATCAAGTACCTGATTCCATGAGA
AGTTTGGGCATTGCACTTTACCTTAGTGTAATTGGAGCTGCAAATTTCATTAGCAGCCTG
TTGATAACCATTGTGGATCATATCACAGAGAAAAGTGGCAAGAGTTGGTTTGGAAAGGAT
CCAAACAGCAGCCGGCTCGACTACTTCTACTGGTTGTTAGCTATCATTACAGCTGTAAAT
TTGTGTGTTTATGTCATTGTTGCGAGGAATTATTCGTACAAGAATGTTCGCTGTAAGGCA
ACTATGTCTGTGGCTGATTGTGATGATAGGGATAATCGCGAAGCAATGGTTTAG

Peptide Sequence

PEP ID

PGSC0003DMP400019576
PEP Infomation

pacid=37479644 transcript=PGSC0003DMT400028793 locus=PGSC0003DMG400011083 ID=PGSC0003DMT400028793.v4.03 annot-version=v4.03
Sequence

MDKINVEMEQITRAESVEMDDQKLVYDSSVDHKGRVPLRSSTGVWKASLFIIVIEFSERL
SFFGIATSLIMYLTKVIHQDLKTAAKSVNYWTGVTTLMPLLGGFLADAYLGRFSTVLLSS
TVYFLGLLLLTMSRVVPSLKPCESDLCDTRRNVHEPIFFLAIYLISVGTGGHKPSLESFG
ADQFDDENPEERRKKMSFFNWWNFGLCCGLLLGVTLIVYVQEHVSWAMADVILTLVMASS
IAIFYAGKPVYRFRKTTGSPLTPMLNVLVAAIRKRSLQLPSDPFHLHEVPKSETTQRRLL
GHTKRLKFLDKAAILDQTQDSTEQQRNPWKLATVTNVEELKLIINMIPIWLTTLPFGICV
AQAATFFLKQGVTMNRRIIHNFEIPPASIYALTAVGMIISVAFYDKILVPFLRRTTGNER
GINILQRIGIGMIFSISTMIVAALVERKRLNLVDKNPLEGSSSMSVFWLAPQFLILGIAD
GFALVGLQEFFYDQVPDSMRSLGIALYLSVIGAANFISSLLITIVDHITEKSGKSWFGKD
PNSSRLDYFYWLLAIITAVNLCVYVIVARNYSYKNVRCKATMSVADCDDRDNREAMV*

Transcript Sequence

Transcript ID

PGSC0003DMT400028793
Transcript Infomation

pacid=37479644 locus=PGSC0003DMG400011083 ID=PGSC0003DMT400028793.v4.03 annot-version=v4.03
Sequence

ATGGATAAGATAAATGTGGAAATGGAGCAGATAACGAGAGCAGAATCAGTAGAAATGGAT
GATCAAAAACTGGTTTATGATTCTTCGGTTGATCATAAAGGACGAGTTCCTCTTAGGAGT
TCAACTGGTGTATGGAAGGCCTCACTCTTTATTATCGTGATTGAATTCAGTGAGAGGCTG
AGTTTCTTTGGAATAGCTACGAGTTTGATTATGTACTTAACAAAAGTCATCCATCAAGAC
CTCAAAACAGCAGCAAAAAGTGTCAATTACTGGACAGGAGTCACTACCTTGATGCCATTG
CTGGGAGGCTTTCTCGCTGATGCATACTTGGGACGATTCTCCACCGTTCTTCTCTCTTCC
ACGGTCTACTTCCTGGGCTTGCTTCTATTGACAATGTCTAGAGTGGTCCCGAGCTTAAAA
CCTTGTGAGAGTGACCTCTGTGATACACGGAGGAATGTCCATGAGCCAATCTTCTTCCTA
GCAATCTACTTAATCTCTGTTGGAACCGGAGGACACAAGCCTTCTCTTGAGAGCTTTGGA
GCTGATCAGTTTGATGATGAAAATCCTGAAGAAAGAAGGAAAAAAATGTCATTTTTCAAT
TGGTGGAACTTTGGGCTATGCTGTGGACTATTACTTGGTGTTACTCTTATCGTTTATGTA
CAAGAGCATGTTAGCTGGGCCATGGCAGATGTAATACTCACACTAGTTATGGCTTCTAGT
ATAGCCATCTTCTATGCAGGGAAGCCAGTGTATCGTTTTAGGAAGACGACTGGAAGTCCA
TTAACACCCATGCTAAACGTGCTCGTAGCTGCAATTCGGAAAAGAAGCCTTCAACTTCCT
TCAGATCCTTTTCATCTACATGAAGTTCCCAAGTCAGAAACTACCCAAAGGAGGCTCTTA
GGCCACACCAAAAGGCTAAAGTTCCTTGATAAAGCAGCAATCCTAGATCAAACTCAAGAT
TCGACAGAACAGCAACGGAATCCGTGGAAACTTGCAACTGTCACCAATGTGGAAGAACTG
AAGCTAATTATCAACATGATACCTATTTGGCTAACCACTTTACCGTTTGGTATATGCGTA
GCACAAGCTGCAACTTTTTTCTTAAAACAAGGCGTGACAATGAACCGGAGGATCATTCAC
AATTTCGAGATTCCCCCAGCCTCAATTTATGCCCTGACAGCTGTTGGCATGATAATATCT
GTTGCTTTCTATGACAAAATCCTTGTACCTTTCCTGAGAAGGACAACAGGAAATGAGAGG
GGCATAAATATTCTCCAAAGGATCGGTATTGGAATGATCTTCTCGATCTCTACTATGATC
GTTGCAGCTTTAGTCGAAAGAAAAAGACTGAATCTTGTTGACAAAAATCCACTCGAAGGT
TCGAGTTCAATGAGTGTGTTTTGGCTAGCCCCACAATTCCTTATCCTTGGAATAGCAGAT
GGATTTGCCTTAGTGGGATTGCAAGAATTCTTCTATGATCAAGTACCTGATTCCATGAGA
AGTTTGGGCATTGCACTTTACCTTAGTGTAATTGGAGCTGCAAATTTCATTAGCAGCCTG
TTGATAACCATTGTGGATCATATCACAGAGAAAAGTGGCAAGAGTTGGTTTGGAAAGGAT
CCAAACAGCAGCCGGCTCGACTACTTCTACTGGTTGTTAGCTATCATTACAGCTGTAAAT
TTGTGTGTTTATGTCATTGTTGCGAGGAATTATTCGTACAAGAATGTTCGCTGTAAGGCA
ACTATGTCTGTGGCTGATTGTGATGATAGGGATAATCGCGAAGCAATGGTTTAG