Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400028782
CDS Infomation

pacid=37479949 polypeptide=PGSC0003DMP400019570 locus=PGSC0003DMG400011080 ID=PGSC0003DMT400028782.v4.03 annot-version=v4.03
Sequence

ATGAGCATAACATTTTTTCCCAGTGTTGAGAAATGCACATCCGAAGGACGAGAAAAAGAT
ACACTAGTTACTGACTTGGATGGAACCTTACTACGAGGTAGAAGCTCTTTCGCTTATTTC
GCGTTGGTAGCTTTCGATGTTGGTGGGGTCTTAAGGTTACTATTTCTTCTCTTAGCTTCA
CCTCTCGCGGGGATTCTTTATTATTTCATCTCCGAGTCTGTTGGAATTCAAGTTCTTATA
TTTGTAACGTTTGTAGGGATGAAGGTTTCCGATATAGAATCAGCAGCACGTGCTGTGTTG
CCAAAATTCTATTCTGAAGACCTTCATCCTGAGTCTTGGAGAGTGTTCTCATCATGTGGG
AAACGTTGTGTTTTGACTGCCACACCTAAGATTATGGTGGAACCTTTTTTGAAAGACTAC
TTGGGGGTAGATATTGTTTTAGGGACGGAGATTGAAACATATAAAGGTAGAGCAACTGGC
TTTGTTAGATCGCCCGGAGTTCTTGTTGGGAAGAACAAGGCTAATGCTCTTAGAAGGACT
TTCGGAGATACTCAACCTGAGATTGGCTTGGGTGATCGCGATACTGATATTCCTTTTGTG
ACATTGTGTAAGGAAGGCTACTTTGTTCCATCAAACCCAAAAGTAAAGGCGGTAAGTACA
AACAAACTTCCCAAGCCTATTATATTCCATGATGGCCGTCTTATCAAAAAGCCAACACCA
CTAATGTCTCTTCTCATCATTCTTTGGATCCCCTTCGGCTTCTTCCTATCTTGTTTGCGA
GCTTGTGCAGGATTACTCCTCCCTACACCTCTTCAATACTACGCCTCATGGGCCATGGGT
GTCCGTCTCATAATCAGAGGCAACCCACCACCCCGTATCAAGAAATCTAAAGATCAATCA
GGCGTACTCTTTGTTTGTAGTCACAAGACTCTTTGTGACGCTGTTTTACTCTCTACAGTG
TTAGGTCGCCCTATCCCAGCAGTTGCATACTCTCTTTCGCGATTTTCTGAAATCATAGCA
CCAATTAAAACAATTAGACTCACTAGAGAACGAGGTTCTGATGCATCCATTATAAAACAA
CTATTAAAAGAAGGTGATCTCACAATTTTCCCAGAAGGGACTACTTGTCGCGAACCATTT
CTTCTTAGATTTTCATCATTATTTGCTGAGCTAACCAATGAGATCGTCCCCGTGGCAATG
GTGAATAAGATGAGCATGTTTCATGGTACTACGGCTAGAGGATGGAAATGGATGGACATG
TTTTTCTTTCTGATGAATCCACGTCCCACTTATGAAATTACATTCTTGAATAAGTTGTCG
TATGAGTACACTTGCAAGTCTGGGAAATCAAGCCATGAAGTAGCTAACTACGTACAAAAG
GTTATCGCGGAAACTCTCTCTTACGAGTGTACTATTTTTACCAGGAAGGATAAGTACATA
GCTCTTGCAGGAAACGATGGCACAGTTATGAAGAAAAGTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400019570
PEP Infomation

pacid=37479949 transcript=PGSC0003DMT400028782 locus=PGSC0003DMG400011080 ID=PGSC0003DMT400028782.v4.03 annot-version=v4.03
Sequence

MSITFFPSVEKCTSEGREKDTLVTDLDGTLLRGRSSFAYFALVAFDVGGVLRLLFLLLAS
PLAGILYYFISESVGIQVLIFVTFVGMKVSDIESAARAVLPKFYSEDLHPESWRVFSSCG
KRCVLTATPKIMVEPFLKDYLGVDIVLGTEIETYKGRATGFVRSPGVLVGKNKANALRRT
FGDTQPEIGLGDRDTDIPFVTLCKEGYFVPSNPKVKAVSTNKLPKPIIFHDGRLIKKPTP
LMSLLIILWIPFGFFLSCLRACAGLLLPTPLQYYASWAMGVRLIIRGNPPPRIKKSKDQS
GVLFVCSHKTLCDAVLLSTVLGRPIPAVAYSLSRFSEIIAPIKTIRLTRERGSDASIIKQ
LLKEGDLTIFPEGTTCREPFLLRFSSLFAELTNEIVPVAMVNKMSMFHGTTARGWKWMDM
FFFLMNPRPTYEITFLNKLSYEYTCKSGKSSHEVANYVQKVIAETLSYECTIFTRKDKYI
ALAGNDGTVMKKS*

Transcript Sequence

Transcript ID

PGSC0003DMT400028782
Transcript Infomation

pacid=37479949 locus=PGSC0003DMG400011080 ID=PGSC0003DMT400028782.v4.03 annot-version=v4.03
Sequence

ATGAGCATAACATTTTTTCCCAGTGTTGAGAAATGCACATCCGAAGGACGAGAAAAAGAT
ACACTAGTTACTGACTTGGATGGAACCTTACTACGAGGTAGAAGCTCTTTCGCTTATTTC
GCGTTGGTAGCTTTCGATGTTGGTGGGGTCTTAAGGTTACTATTTCTTCTCTTAGCTTCA
CCTCTCGCGGGGATTCTTTATTATTTCATCTCCGAGTCTGTTGGAATTCAAGTTCTTATA
TTTGTAACGTTTGTAGGGATGAAGGTTTCCGATATAGAATCAGCAGCACGTGCTGTGTTG
CCAAAATTCTATTCTGAAGACCTTCATCCTGAGTCTTGGAGAGTGTTCTCATCATGTGGG
AAACGTTGTGTTTTGACTGCCACACCTAAGATTATGGTGGAACCTTTTTTGAAAGACTAC
TTGGGGGTAGATATTGTTTTAGGGACGGAGATTGAAACATATAAAGGTAGAGCAACTGGC
TTTGTTAGATCGCCCGGAGTTCTTGTTGGGAAGAACAAGGCTAATGCTCTTAGAAGGACT
TTCGGAGATACTCAACCTGAGATTGGCTTGGGTGATCGCGATACTGATATTCCTTTTGTG
ACATTGTGTAAGGAAGGCTACTTTGTTCCATCAAACCCAAAAGTAAAGGCGGTAAGTACA
AACAAACTTCCCAAGCCTATTATATTCCATGATGGCCGTCTTATCAAAAAGCCAACACCA
CTAATGTCTCTTCTCATCATTCTTTGGATCCCCTTCGGCTTCTTCCTATCTTGTTTGCGA
GCTTGTGCAGGATTACTCCTCCCTACACCTCTTCAATACTACGCCTCATGGGCCATGGGT
GTCCGTCTCATAATCAGAGGCAACCCACCACCCCGTATCAAGAAATCTAAAGATCAATCA
GGCGTACTCTTTGTTTGTAGTCACAAGACTCTTTGTGACGCTGTTTTACTCTCTACAGTG
TTAGGTCGCCCTATCCCAGCAGTTGCATACTCTCTTTCGCGATTTTCTGAAATCATAGCA
CCAATTAAAACAATTAGACTCACTAGAGAACGAGGTTCTGATGCATCCATTATAAAACAA
CTATTAAAAGAAGGTGATCTCACAATTTTCCCAGAAGGGACTACTTGTCGCGAACCATTT
CTTCTTAGATTTTCATCATTATTTGCTGAGCTAACCAATGAGATCGTCCCCGTGGCAATG
GTGAATAAGATGAGCATGTTTCATGGTACTACGGCTAGAGGATGGAAATGGATGGACATG
TTTTTCTTTCTGATGAATCCACGTCCCACTTATGAAATTACATTCTTGAATAAGTTGTCG
TATGAGTACACTTGCAAGTCTGGGAAATCAAGCCATGAAGTAGCTAACTACGTACAAAAG
GTTATCGCGGAAACTCTCTCTTACGAGTGTACTATTTTTACCAGGAAGGATAAGTACATA
GCTCTTGCAGGAAACGATGGCACAGTTATGAAGAAAAGTTGA