Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400028781
CDS Infomation

pacid=37478465 polypeptide=PGSC0003DMP400019569 locus=PGSC0003DMG400011079 ID=PGSC0003DMT400028781.v4.03 annot-version=v4.03
Sequence

ATGGGGATAACAACATCTCCTACTATTGAGAAATGCACTTTGGAAGGTCGAGCAAGAGAT
ACAATAGTTGCTAACTTGGATGGAACTTTACTACGAAGTAAAGCTACTTTTGCTTATTTC
GCGTTGGTAGCATTCGATGTTGGTGGGGTCTTAAGGTTACTATTTCTTCTCTTAGTTTCA
CCTTTTTTCAGTATTCTTTACTATTTCATCTCGGAGTCTGTTGGACTCCAAGTTATTATC
TTTGTAACTTTTGTAGGGATGAAGGTCTCCGATATAGAATCAGCAGCACGTGCTGTGCTT
CCAAAGTTCTACTCTGAAGACCTTCATCCCGAGTCTTGGAGAGTATTCTCATCATGTGGG
AAACGTTGTGTTTTGACTTCCACCCCTAGGATTATGGTGGAACCATTTTTGAAAGACTAC
TTGGGGGTAGAAATTGTTTTAGGGACCGAGATTGAAACATATAAAGGTAGAGCAACTGGC
ATTGTTAGATCGCCCGGAGTTCTTGTTGGGAAGAACAAGGCTAATGCTCTTAGAACGACT
TTTGGAGATACTCAACCTGATATTGGCTTGGGTGATCGCGATACTGATATTCCTTTTGTG
ACATTGTGTAAGGAAGGCTACATTGTTCCATCAAACCCAAAAGTAAAGGCGGTAAGTACA
AACAAACTTCCCAAGCCTATTATATTCCATGATGGTCGTCTTATCAAAAAGCCAACACCG
CTAATACCTCTTCTCATCATTCTTTGGATCCCCTTCGGCTTCTTCCTATCTTGTTTGCGA
GCTTGTGCAGGATTACTCCTCCCTACACCTCTTCAATACTACGCCTCATGGGCCATGGGT
GTCCGTCTCATAATCAGAGGCAACCCACCACCCCGTATCAAGAAATCTAAAGATCAATCA
GGCGTACTCTTTGTTTGTAGTCACAAGACTCTTTGTGACGCTGTTTTACTCTCTACAGTG
TTAGGTCGCCCTATCCCAGCAGTTGCATACTCTCTTTCGCGATTTTCTGAAATCATAGCA
CCAATTAAAACAATTAGACTCACTAGAGAACGAGGTTCTGATGCATCCATTATAAAACAA
CTATTAAAAGAAGGTGATCTCACAATTTTCCCAGAAGGGACTACTTGTCGCGAACCATTT
CTTCTTAGGTTTTCATCATTATTTGCTGAGTTAACCAATGAGATCGTCCCCGTGGCAATG
GTGAATAAGATGAGCATGTTTCATGGTACAACGGCTAGAGGATGGAAATGGATGGACATG
TTTTTCAGCTTTCTCATGAATCCACGTCCGACTTATGAAATTACATTCTTGAATAAGTTG
TCGTATGAGTTCACTTGCAAGTCAGGTAAATCAAGCCATGAAGTGGCTAACTATGTACAA
AAGGTTATCGCGGAAACTCTTTCTTACGAGTGTACTATTTTCACTAGGAAGGATAAGTAC
ATAGCTCTTGCAGGAAACGATGGCACAGTTATGAAGAATAGTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400019569
PEP Infomation

pacid=37478465 transcript=PGSC0003DMT400028781 locus=PGSC0003DMG400011079 ID=PGSC0003DMT400028781.v4.03 annot-version=v4.03
Sequence

MGITTSPTIEKCTLEGRARDTIVANLDGTLLRSKATFAYFALVAFDVGGVLRLLFLLLVS
PFFSILYYFISESVGLQVIIFVTFVGMKVSDIESAARAVLPKFYSEDLHPESWRVFSSCG
KRCVLTSTPRIMVEPFLKDYLGVEIVLGTEIETYKGRATGIVRSPGVLVGKNKANALRTT
FGDTQPDIGLGDRDTDIPFVTLCKEGYIVPSNPKVKAVSTNKLPKPIIFHDGRLIKKPTP
LIPLLIILWIPFGFFLSCLRACAGLLLPTPLQYYASWAMGVRLIIRGNPPPRIKKSKDQS
GVLFVCSHKTLCDAVLLSTVLGRPIPAVAYSLSRFSEIIAPIKTIRLTRERGSDASIIKQ
LLKEGDLTIFPEGTTCREPFLLRFSSLFAELTNEIVPVAMVNKMSMFHGTTARGWKWMDM
FFSFLMNPRPTYEITFLNKLSYEFTCKSGKSSHEVANYVQKVIAETLSYECTIFTRKDKY
IALAGNDGTVMKNS*

Transcript Sequence

Transcript ID

PGSC0003DMT400028781
Transcript Infomation

pacid=37478465 locus=PGSC0003DMG400011079 ID=PGSC0003DMT400028781.v4.03 annot-version=v4.03
Sequence

ATGGGGATAACAACATCTCCTACTATTGAGAAATGCACTTTGGAAGGTCGAGCAAGAGAT
ACAATAGTTGCTAACTTGGATGGAACTTTACTACGAAGTAAAGCTACTTTTGCTTATTTC
GCGTTGGTAGCATTCGATGTTGGTGGGGTCTTAAGGTTACTATTTCTTCTCTTAGTTTCA
CCTTTTTTCAGTATTCTTTACTATTTCATCTCGGAGTCTGTTGGACTCCAAGTTATTATC
TTTGTAACTTTTGTAGGGATGAAGGTCTCCGATATAGAATCAGCAGCACGTGCTGTGCTT
CCAAAGTTCTACTCTGAAGACCTTCATCCCGAGTCTTGGAGAGTATTCTCATCATGTGGG
AAACGTTGTGTTTTGACTTCCACCCCTAGGATTATGGTGGAACCATTTTTGAAAGACTAC
TTGGGGGTAGAAATTGTTTTAGGGACCGAGATTGAAACATATAAAGGTAGAGCAACTGGC
ATTGTTAGATCGCCCGGAGTTCTTGTTGGGAAGAACAAGGCTAATGCTCTTAGAACGACT
TTTGGAGATACTCAACCTGATATTGGCTTGGGTGATCGCGATACTGATATTCCTTTTGTG
ACATTGTGTAAGGAAGGCTACATTGTTCCATCAAACCCAAAAGTAAAGGCGGTAAGTACA
AACAAACTTCCCAAGCCTATTATATTCCATGATGGTCGTCTTATCAAAAAGCCAACACCG
CTAATACCTCTTCTCATCATTCTTTGGATCCCCTTCGGCTTCTTCCTATCTTGTTTGCGA
GCTTGTGCAGGATTACTCCTCCCTACACCTCTTCAATACTACGCCTCATGGGCCATGGGT
GTCCGTCTCATAATCAGAGGCAACCCACCACCCCGTATCAAGAAATCTAAAGATCAATCA
GGCGTACTCTTTGTTTGTAGTCACAAGACTCTTTGTGACGCTGTTTTACTCTCTACAGTG
TTAGGTCGCCCTATCCCAGCAGTTGCATACTCTCTTTCGCGATTTTCTGAAATCATAGCA
CCAATTAAAACAATTAGACTCACTAGAGAACGAGGTTCTGATGCATCCATTATAAAACAA
CTATTAAAAGAAGGTGATCTCACAATTTTCCCAGAAGGGACTACTTGTCGCGAACCATTT
CTTCTTAGGTTTTCATCATTATTTGCTGAGTTAACCAATGAGATCGTCCCCGTGGCAATG
GTGAATAAGATGAGCATGTTTCATGGTACAACGGCTAGAGGATGGAAATGGATGGACATG
TTTTTCAGCTTTCTCATGAATCCACGTCCGACTTATGAAATTACATTCTTGAATAAGTTG
TCGTATGAGTTCACTTGCAAGTCAGGTAAATCAAGCCATGAAGTGGCTAACTATGTACAA
AAGGTTATCGCGGAAACTCTTTCTTACGAGTGTACTATTTTCACTAGGAAGGATAAGTAC
ATAGCTCTTGCAGGAAACGATGGCACAGTTATGAAGAATAGTTGA