Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400028767
CDS Infomation

pacid=37477454 polypeptide=PGSC0003DMP400019561 locus=PGSC0003DMG400011072 ID=PGSC0003DMT400028767.v4.03 annot-version=v4.03
Sequence

ATGGCTAGCTCTGTGTCAACTGTTGCAGCTGCCAACAAAGTACTGTTGAGTTTGAACAAC
TCTGTTGCTGGAAATTCAGCTCCAAGCACTGTCTTCTTTGGCAAAACCTTGAAGAAGGTG
AACGCGAAAGGCACTTCTAGCCCCAAGGTTTCGAAAAGGAGCTTCAGGATTGTAGGAGCA
CAAGAAATAGACGAGAAGAAACAAACGGATCAAGACAGATGGAAGGGCCTTGTGACGGAC
ATGTCTGATGATCAACAGGACATCACCAGGGGAAAGGGTATGGTAGACCCTCTTTTCCAA
GCTCCTGTGGGTACTGGTACTCACCATCCTGTCTTGTCATCATACGAATACATCAGCCAG
GGTCTTCGTCAATACAACCTGGACAACACGCTGGATGGATTCTATATTGCTCCGGCTTTC
ATGGACAAGCTAGTTGTCCACATCACAAAGAACTTCTTGACATTGCCCAATATTAAGGTA
CCACTAATTTTAGGTATCTGGGGAGGGAAAGGTCAAGGGAAGTCATTCCAGTGTGAGCTT
GTCTTTCGAAAAATGGGAATCAACCCCATCATGATGAGTGCTGGAGAATTGGAAAGCGGA
AATGCAGGGGAGCCAGCAAAATTGATTAGGCAAAGATACCGCGAGGCAGCTGAAATCATC
AGGAAAGGAAACATGTGTGTCCTGTTCATCAACGATCTCGATGCAGGAGCTGGTAGAATG
GGTGGAACTACACAATACACAGTTAACAACCAGATGGTGAATGCTACCCTCATGAACATT
GCAGATAACCCGACAAATGTCCAGCTCCCCGGTATGTACAACAAGCAAGAGAATGCCAGG
GTCCCTATTATAGTCACTGGTAACGACTTCTCCACATTGTATGCCCCTCTTATCCGTGAT
GGTCGTATGGAAAAGTTCTACTGGGCACCAACCAGAGAAGACAGAATTGGTGTATGCAAA
GGAATTTTCAGAACTGACAGCGTACCTGATGAGCACGTTGTAAGGCTTGTCGATGCCTTC
CCTGGACAATCTATTGACTTCTTTGGTGCTCTGAGGGCAAGAGTATACGACGATGAAGTC
AGAAAGTGGATTGAAAAAACTGGAATCGAACAAGTTGGGGAAAAACTATTGAACTCTATC
GAAGGACCTCCAAAATTTGAGCAACCAAAGATGACAATTGACAAGCTCCTCGAGTACGGA
TACTTGCTTGTCCAAGAGCAAGAGAATGTGAAGAGAGTTCAATTGGCTGACAAGTACCTT
AAAGAGGCAGCACTTGGAGATGCAAATGCGGATGCCATCAACATGGGGAACTTCTAA

Peptide Sequence

PEP ID

PGSC0003DMP400019561
PEP Infomation

pacid=37477454 transcript=PGSC0003DMT400028767 locus=PGSC0003DMG400011072 ID=PGSC0003DMT400028767.v4.03 annot-version=v4.03
Sequence

MASSVSTVAAANKVLLSLNNSVAGNSAPSTVFFGKTLKKVNAKGTSSPKVSKRSFRIVGA
QEIDEKKQTDQDRWKGLVTDMSDDQQDITRGKGMVDPLFQAPVGTGTHHPVLSSYEYISQ
GLRQYNLDNTLDGFYIAPAFMDKLVVHITKNFLTLPNIKVPLILGIWGGKGQGKSFQCEL
VFRKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAEIIRKGNMCVLFINDLDAGAGRM
GGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKQENARVPIIVTGNDFSTLYAPLIRD
GRMEKFYWAPTREDRIGVCKGIFRTDSVPDEHVVRLVDAFPGQSIDFFGALRARVYDDEV
RKWIEKTGIEQVGEKLLNSIEGPPKFEQPKMTIDKLLEYGYLLVQEQENVKRVQLADKYL
KEAALGDANADAINMGNF*

Transcript Sequence

Transcript ID

PGSC0003DMT400028767
Transcript Infomation

pacid=37477454 locus=PGSC0003DMG400011072 ID=PGSC0003DMT400028767.v4.03 annot-version=v4.03
Sequence

ATGGCTAGCTCTGTGTCAACTGTTGCAGCTGCCAACAAAGTACTGTTGAGTTTGAACAAC
TCTGTTGCTGGAAATTCAGCTCCAAGCACTGTCTTCTTTGGCAAAACCTTGAAGAAGGTG
AACGCGAAAGGCACTTCTAGCCCCAAGGTTTCGAAAAGGAGCTTCAGGATTGTAGGAGCA
CAAGAAATAGACGAGAAGAAACAAACGGATCAAGACAGATGGAAGGGCCTTGTGACGGAC
ATGTCTGATGATCAACAGGACATCACCAGGGGAAAGGGTATGGTAGACCCTCTTTTCCAA
GCTCCTGTGGGTACTGGTACTCACCATCCTGTCTTGTCATCATACGAATACATCAGCCAG
GGTCTTCGTCAATACAACCTGGACAACACGCTGGATGGATTCTATATTGCTCCGGCTTTC
ATGGACAAGCTAGTTGTCCACATCACAAAGAACTTCTTGACATTGCCCAATATTAAGGTA
CCACTAATTTTAGGTATCTGGGGAGGGAAAGGTCAAGGGAAGTCATTCCAGTGTGAGCTT
GTCTTTCGAAAAATGGGAATCAACCCCATCATGATGAGTGCTGGAGAATTGGAAAGCGGA
AATGCAGGGGAGCCAGCAAAATTGATTAGGCAAAGATACCGCGAGGCAGCTGAAATCATC
AGGAAAGGAAACATGTGTGTCCTGTTCATCAACGATCTCGATGCAGGAGCTGGTAGAATG
GGTGGAACTACACAATACACAGTTAACAACCAGATGGTGAATGCTACCCTCATGAACATT
GCAGATAACCCGACAAATGTCCAGCTCCCCGGTATGTACAACAAGCAAGAGAATGCCAGG
GTCCCTATTATAGTCACTGGTAACGACTTCTCCACATTGTATGCCCCTCTTATCCGTGAT
GGTCGTATGGAAAAGTTCTACTGGGCACCAACCAGAGAAGACAGAATTGGTGTATGCAAA
GGAATTTTCAGAACTGACAGCGTACCTGATGAGCACGTTGTAAGGCTTGTCGATGCCTTC
CCTGGACAATCTATTGACTTCTTTGGTGCTCTGAGGGCAAGAGTATACGACGATGAAGTC
AGAAAGTGGATTGAAAAAACTGGAATCGAACAAGTTGGGGAAAAACTATTGAACTCTATC
GAAGGACCTCCAAAATTTGAGCAACCAAAGATGACAATTGACAAGCTCCTCGAGTACGGA
TACTTGCTTGTCCAAGAGCAAGAGAATGTGAAGAGAGTTCAATTGGCTGACAAGTACCTT
AAAGAGGCAGCACTTGGAGATGCAAATGCGGATGCCATCAACATGGGGAACTTCTAA