Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400028690
CDS Infomation

pacid=37476724 polypeptide=PGSC0003DMP400019507 locus=PGSC0003DMG400011044 ID=PGSC0003DMT400028690.v4.03 annot-version=v4.03
Sequence

ATGGCAACTATCAAGTCCGTCAAGGCTCGTCAGATCTTCGATAGCCGTGGTAATCCAACG
GTTGAGGTTGATGTTCATCTGTCAAATGGCGTCTGGGAGAGAGCTGCGGTTCCTAGTGGC
GCATCAACAGGAATATATGAAGCCCTTGAATTGAGAGATGGAGGGTCTGAGTACCTTGGG
AAGGGTGTTTCAAAGGCCGTAAACAATGTCAACTCAATCATTGGCCCTGCTCTTATTGGC
AAGGACCCGACTGATCAGACTGGTCTCGATAACTACATGGTTCATCAACTAGATGGAACT
CAAAATGAGTGGGGTTGGTGCAAGCAAAAGCTTGGTGCAAATGCCATCCTTGCTGTGTCA
CTTGCAGTCTGCAAAGCTGGTGCTGCTGTCAAGAACATTCCGCTTTATAAGCATATTGCC
AATTTGGCGGGTAACAAAAAGTTGGTTTTGCCTGTTCCTGCTTTCAACGTCATCAATGGT
GGGTCCCATGCTGGAAACAAACTTGCAATGCAGGAATTTATGATTCTTCCTGTTGGAGCT
TCTAGTTTTAAGGAGGCCATGAAGATGGGCTGTGAAGTGTATCACCATTTGAAGGCTGTG
ATTAAGAAGAAATATGGCCAGGATGCAACAAATGTTGGTGATGAGGGTGGTTTCGCTCCT
AATATCCAGGAGAACAAGGAGGGTCTTGAATTGCTCAAGACTGCCATCGAAAAAGCAGGC
TATACTGGAAAAGTTGTTATTGGAATGGATGTTGCAGCATCTGAATTCTATGGAAAGGAC
AAAACTTATGATTTGAACTTCAAAGAAGAGAACAACAATGGCTCCCAAAAGATCTCAGGT
GACCAGCTCAAAGATTTGTACAAGTCATTTGTGTCTGAGTACCCTATTGTTTCGATAGAA
GATCCATTTGACCAAGATGACTGGGAGACCTATGCTAAGCTCACTGCTGAAATTGGGGAG
AAAGTACAAATTGTAGGAGATGACCTTCTTGTCACCAATCCTAAGAGAGTTGCCAAGGCA
ATCAGTGAAAAGACTTGCAATGCACTTCTTCTTAAGGTTAACCAAATTGGCAGCGTGACT
GAGAGTATCGAAGCTGTGAAAATGTCTAAGCAAGCTGGTTGGGGTGTAATGACTAGCCAC
CGCAGTGGAGAGACGGAGGATACCTTCATTGCTGATCTTGCTGTTGGTTTGTCAACGGGA
CAAATCAAGACTGGAGCTCCCTGCAGATCAGAACGTCTTGCAAAGTACAACCAGCTCTTG
AGAATTGACGAGGAACTTGGTTCAGATGCTGTATATGCCGGAGCAAGCTTCCGCACCCCT
GTTGAACCGTACTAA

Peptide Sequence

PEP ID

PGSC0003DMP400019507
PEP Infomation

pacid=37476724 transcript=PGSC0003DMT400028690 locus=PGSC0003DMG400011044 ID=PGSC0003DMT400028690.v4.03 annot-version=v4.03
Sequence

MATIKSVKARQIFDSRGNPTVEVDVHLSNGVWERAAVPSGASTGIYEALELRDGGSEYLG
KGVSKAVNNVNSIIGPALIGKDPTDQTGLDNYMVHQLDGTQNEWGWCKQKLGANAILAVS
LAVCKAGAAVKNIPLYKHIANLAGNKKLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGA
SSFKEAMKMGCEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQENKEGLELLKTAIEKAG
YTGKVVIGMDVAASEFYGKDKTYDLNFKEENNNGSQKISGDQLKDLYKSFVSEYPIVSIE
DPFDQDDWETYAKLTAEIGEKVQIVGDDLLVTNPKRVAKAISEKTCNALLLKVNQIGSVT
ESIEAVKMSKQAGWGVMTSHRSGETEDTFIADLAVGLSTGQIKTGAPCRSERLAKYNQLL
RIDEELGSDAVYAGASFRTPVEPY*

Transcript Sequence

Transcript ID

PGSC0003DMT400028690
Transcript Infomation

pacid=37476724 locus=PGSC0003DMG400011044 ID=PGSC0003DMT400028690.v4.03 annot-version=v4.03
Sequence

ATGGCAACTATCAAGTCCGTCAAGGCTCGTCAGATCTTCGATAGCCGTGGTAATCCAACG
GTTGAGGTTGATGTTCATCTGTCAAATGGCGTCTGGGAGAGAGCTGCGGTTCCTAGTGGC
GCATCAACAGGAATATATGAAGCCCTTGAATTGAGAGATGGAGGGTCTGAGTACCTTGGG
AAGGGTGTTTCAAAGGCCGTAAACAATGTCAACTCAATCATTGGCCCTGCTCTTATTGGC
AAGGACCCGACTGATCAGACTGGTCTCGATAACTACATGGTTCATCAACTAGATGGAACT
CAAAATGAGTGGGGTTGGTGCAAGCAAAAGCTTGGTGCAAATGCCATCCTTGCTGTGTCA
CTTGCAGTCTGCAAAGCTGGTGCTGCTGTCAAGAACATTCCGCTTTATAAGCATATTGCC
AATTTGGCGGGTAACAAAAAGTTGGTTTTGCCTGTTCCTGCTTTCAACGTCATCAATGGT
GGGTCCCATGCTGGAAACAAACTTGCAATGCAGGAATTTATGATTCTTCCTGTTGGAGCT
TCTAGTTTTAAGGAGGCCATGAAGATGGGCTGTGAAGTGTATCACCATTTGAAGGCTGTG
ATTAAGAAGAAATATGGCCAGGATGCAACAAATGTTGGTGATGAGGGTGGTTTCGCTCCT
AATATCCAGGAGAACAAGGAGGGTCTTGAATTGCTCAAGACTGCCATCGAAAAAGCAGGC
TATACTGGAAAAGTTGTTATTGGAATGGATGTTGCAGCATCTGAATTCTATGGAAAGGAC
AAAACTTATGATTTGAACTTCAAAGAAGAGAACAACAATGGCTCCCAAAAGATCTCAGGT
GACCAGCTCAAAGATTTGTACAAGTCATTTGTGTCTGAGTACCCTATTGTTTCGATAGAA
GATCCATTTGACCAAGATGACTGGGAGACCTATGCTAAGCTCACTGCTGAAATTGGGGAG
AAAGTACAAATTGTAGGAGATGACCTTCTTGTCACCAATCCTAAGAGAGTTGCCAAGGCA
ATCAGTGAAAAGACTTGCAATGCACTTCTTCTTAAGGTTAACCAAATTGGCAGCGTGACT
GAGAGTATCGAAGCTGTGAAAATGTCTAAGCAAGCTGGTTGGGGTGTAATGACTAGCCAC
CGCAGTGGAGAGACGGAGGATACCTTCATTGCTGATCTTGCTGTTGGTTTGTCAACGGGA
CAAATCAAGACTGGAGCTCCCTGCAGATCAGAACGTCTTGCAAAGTACAACCAGCTCTTG
AGAATTGACGAGGAACTTGGTTCAGATGCTGTATATGCCGGAGCAAGCTTCCGCACCCCT
GTTGAACCGTACTAA