Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400028683
CDS Infomation

pacid=37477888 polypeptide=PGSC0003DMP400019503 locus=PGSC0003DMG400011042 ID=PGSC0003DMT400028683.v4.03 annot-version=v4.03
Sequence

ATGTTCGAGCTCGGCAATGAGCCACACAAAACACTAACGGATCTAAAACAGAAGTACGGT
CCAGTAGTTTGGCTAAAGCTCGGTTCTATTAACACTATGGTGATTCTCTCCGCGAAAGCC
GCATCAGAGTTCTTCAGGAACCACGACGTGGCTTTCGCGGAGAGATCAGTAACCGAGGTG
ATGAAATCACACGGTTATAATAAAGGATCACTAGCTTTAGCTCCTTACGGTACTTACTGG
CGGATCATGAAACGAATCATGACCGTTCAAATGTTAGTTAACAAACGGATCACTGAAACA
GTGGAAGTTCGTCGGAAATGTATCGATGATTTAATCGAATGGATAGAAAACAGAGAACTT
AACTCCTCAGAGGCAATTCACGTGGCGAAATTCGTGTTTCTAGCCTCGTTTAACATGCTG
GGGAAATTGTTGTTATCGCGCGAATTAGTTGACCCAAAATCCGAGAAGGGGACTGAATTT
TTCGCGGCGATGGTGGAGTTAATGGAATGTTCTGGACATCAGAACATAGTGGATGTGTTT
CCATGGTTGAGATGGCTTGATCCTCAAGGTTTGAGGAGGAAGATGGATCGCGGACTTGGA
AAGACGATTGAAATTGTATCGGGTTTTTTGAAGGAGAGGTTCGAAGAAAAGGAAAGGACC
GGAGAGAAGAAGAAGGATTTTTTGGAAGTTCTACTGGAATATGAAGGCAAAGGGAAAGAT
GAACCAGAGAAGATATCAGATCAAGAACTCATCTTGATAATTTTGGAAATATTCTTAGCT
GGTTCGGAGACTACGAGCAGTAGCATAGAATGGGCGATGACAGAGCTACTATGTAATCCA
GAGGCAATGGACAAGGTTAAAACCGAGCTCTCCGAGGTTCTTGGAGATACCAAGAAATTC
GAAGAAGCTGACATCGATAATCTCAAGTATTTGCAAGCTGTTGTAAAAGAAACGTTACGA
TTACATCCTCCAATTCCATTTCTAGTCCCAAGAAAGGCAATTCAAGATACCGAATTCATG
GGGTATCATATCCCTAAAGGCACACAAGTTTTCGTGAACACTTGGGCAATTGGAAGAGAT
CCCGAATGTTGGAAGGACCCTTTGGATTTCAAGCCAGAAAGGTTCTTGGATTCGAATATT
GAATATAGGGGTCAGAATTTTGAGTTTATTCCGTTTGGTGCTGGGAGAAGGATTTGTGCT
GGAATTCCATTGGCTCACCGGATGTTGCATTTGGTACTCGGATCGTTGTTGCGTGAATTC
GATTGGGAGATTGATGTTTCTGTTCTTGATGAGGCTTTGGATACACAAGATAGAATGGGA
GTAACTGTTAGAAAATTAATGCCATTGAAAGCAATTCCAAAGAGAAAAAACAAAACTCTA
TAA

Peptide Sequence

PEP ID

PGSC0003DMP400019503
PEP Infomation

pacid=37477888 transcript=PGSC0003DMT400028683 locus=PGSC0003DMG400011042 ID=PGSC0003DMT400028683.v4.03 annot-version=v4.03
Sequence

MFELGNEPHKTLTDLKQKYGPVVWLKLGSINTMVILSAKAASEFFRNHDVAFAERSVTEV
MKSHGYNKGSLALAPYGTYWRIMKRIMTVQMLVNKRITETVEVRRKCIDDLIEWIENREL
NSSEAIHVAKFVFLASFNMLGKLLLSRELVDPKSEKGTEFFAAMVELMECSGHQNIVDVF
PWLRWLDPQGLRRKMDRGLGKTIEIVSGFLKERFEEKERTGEKKKDFLEVLLEYEGKGKD
EPEKISDQELILIILEIFLAGSETTSSSIEWAMTELLCNPEAMDKVKTELSEVLGDTKKF
EEADIDNLKYLQAVVKETLRLHPPIPFLVPRKAIQDTEFMGYHIPKGTQVFVNTWAIGRD
PECWKDPLDFKPERFLDSNIEYRGQNFEFIPFGAGRRICAGIPLAHRMLHLVLGSLLREF
DWEIDVSVLDEALDTQDRMGVTVRKLMPLKAIPKRKNKTL*

Transcript Sequence

Transcript ID

PGSC0003DMT400028683
Transcript Infomation

pacid=37477888 locus=PGSC0003DMG400011042 ID=PGSC0003DMT400028683.v4.03 annot-version=v4.03
Sequence

ATGTTCGAGCTCGGCAATGAGCCACACAAAACACTAACGGATCTAAAACAGAAGTACGGT
CCAGTAGTTTGGCTAAAGCTCGGTTCTATTAACACTATGGTGATTCTCTCCGCGAAAGCC
GCATCAGAGTTCTTCAGGAACCACGACGTGGCTTTCGCGGAGAGATCAGTAACCGAGGTG
ATGAAATCACACGGTTATAATAAAGGATCACTAGCTTTAGCTCCTTACGGTACTTACTGG
CGGATCATGAAACGAATCATGACCGTTCAAATGTTAGTTAACAAACGGATCACTGAAACA
GTGGAAGTTCGTCGGAAATGTATCGATGATTTAATCGAATGGATAGAAAACAGAGAACTT
AACTCCTCAGAGGCAATTCACGTGGCGAAATTCGTGTTTCTAGCCTCGTTTAACATGCTG
GGGAAATTGTTGTTATCGCGCGAATTAGTTGACCCAAAATCCGAGAAGGGGACTGAATTT
TTCGCGGCGATGGTGGAGTTAATGGAATGTTCTGGACATCAGAACATAGTGGATGTGTTT
CCATGGTTGAGATGGCTTGATCCTCAAGGTTTGAGGAGGAAGATGGATCGCGGACTTGGA
AAGACGATTGAAATTGTATCGGGTTTTTTGAAGGAGAGGTTCGAAGAAAAGGAAAGGACC
GGAGAGAAGAAGAAGGATTTTTTGGAAGTTCTACTGGAATATGAAGGCAAAGGGAAAGAT
GAACCAGAGAAGATATCAGATCAAGAACTCATCTTGATAATTTTGGAAATATTCTTAGCT
GGTTCGGAGACTACGAGCAGTAGCATAGAATGGGCGATGACAGAGCTACTATGTAATCCA
GAGGCAATGGACAAGGTTAAAACCGAGCTCTCCGAGGTTCTTGGAGATACCAAGAAATTC
GAAGAAGCTGACATCGATAATCTCAAGTATTTGCAAGCTGTTGTAAAAGAAACGTTACGA
TTACATCCTCCAATTCCATTTCTAGTCCCAAGAAAGGCAATTCAAGATACCGAATTCATG
GGGTATCATATCCCTAAAGGCACACAAGTTTTCGTGAACACTTGGGCAATTGGAAGAGAT
CCCGAATGTTGGAAGGACCCTTTGGATTTCAAGCCAGAAAGGTTCTTGGATTCGAATATT
GAATATAGGGGTCAGAATTTTGAGTTTATTCCGTTTGGTGCTGGGAGAAGGATTTGTGCT
GGAATTCCATTGGCTCACCGGATGTTGCATTTGGTACTCGGATCGTTGTTGCGTGAATTC
GATTGGGAGATTGATGTTTCTGTTCTTGATGAGGCTTTGGATACACAAGATAGAATGGGA
GTAACTGTTAGAAAATTAATGCCATTGAAAGCAATTCCAAAGAGAAAAAACAAAACTCTA
TAA