Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400028645
CDS Infomation

pacid=37478839 polypeptide=PGSC0003DMP400019475 locus=PGSC0003DMG400011026 ID=PGSC0003DMT400028645.v4.03 annot-version=v4.03
Sequence

ATGGCTTCTTCCTTCAGATGCTTCTTAGTGTTGTACTTCTTGCTATTGTCCTTGTACTTC
ACCCAAATTTCAAGAGCAGAAGAAGATATTGTTGAAGAAGGGATTCTATACATTGATGGG
TTTTCTTCAATTGCAAAAATTGATGAAGATTTTATTTGTGCAACTTTAGATTGGTGGCCT
CCTAGTAAATGTGACTATGGAACTTGTAGCTGGGGAAATGCTTCTCTTCTTAATCTTGAT
CTAAGCAACAAGGTATTTTTCAATGCAATTAGAGCGTTTTCTCCGTTAACAATTAGACTT
GGAGGCACATTGCAAGATAGACTAATATACCAAACGAAGCATGATAAACAACCATGTACT
CCTTTTCTCCATGATGATACAGAGCTGTTAAAATTCACCCAAGGTTGCTTGCCTTTCTCT
CGTTGGGATGAACTCAACGAATTCTTCAAGAGAACGGGGGCAAAAGTAACTTTTGGGTTG
AATACTTTAAATGGAAAGAAAATAGCTTCTGATGGCCGCACTGCTTTGGGAGATTGGGAT
TCCAGCAATGCAGCGTCTTTAATCAGATATACAGTTAGCAGAGGTTATACTATCCACGGC
TGGGAGCTTGGAAATGAATTGAATGGAAACGGAATAGGTCCAGCTATTTCAGCCGATCAG
TACGCTTATGATGTTATAGCTCTTCACAAATTAGTGCAAGATATATATAAAGGGAAGGAT
GTTGTGCCATTAATCCTTGCACCAGGAGGAATATTTGATGCTATTTGGTTTCCAAAATTT
ATAAATAAAGCATCCAATTCTCTTCAAGTAGTTACACATCACATTTACAGTGTTGGTGGA
GGCAATGACCCCAACCTAGTTCAGAAAATACTTGAACCTTCTCATCTGGATGAAGAATCC
AAATACTTGCAAAATCTTCAAGGCGTTCTCCGAAATTCTGGAACTTCAGCTGTAGCATGG
GTTGGTGAAAGTGGAGGAGTTTATAACAGTGGTCGCAATCTTGTTTCAAATAGCTTCGTG
TCCAGCTTTTGGTACTTGGATCAGATTGGGATGTCAGCCACGTTCGATACTAAGAAATAT
TGTCGACAAACATTGGTTGGTGGCAACTACGGTCTCCTCAACACCACAACCTTTCATCCA
AATCCTGATTATTATGGTGCTCTTTTATGGCATCGTTTGATGGGAAGGAATGTTCTATCG
ACACAGTTCCAAGGAATGAAAAAACTGCGCTCATACGCTCACTGTTCAAAATCTTCTGAA
GGAATCACACTGATGTTGATCAACATGCATGGTAGTAAAACAGTTAATATTAATCTTTCA
GTCACACTTGCTAACACAAACGAGTCGTCAATGCTGCTACAAGTCACGAATGATCAGAAC
CCGAGACACGGAATTGAGAGGGAAGAATATCACCTTACAGCCAAAGATGGTGATTTACAT
AGCCAAACAGTGCTTTTGAATGGAAAGGAACTTAATGTGGATCATTTTGGAAGAATCCCT
CTCTTGAAACCTATAAGAGTGAACCCCTCTGATCCAATTTCCATTGCTCCTCTTTCAATT
GTATTTGTTCACATTCCCACTATTCAAGTGCCTGCTTGTAATATGTCTACTAGAGAGAAC
ATGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400019475
PEP Infomation

pacid=37478839 transcript=PGSC0003DMT400028645 locus=PGSC0003DMG400011026 ID=PGSC0003DMT400028645.v4.03 annot-version=v4.03
Sequence

MASSFRCFLVLYFLLLSLYFTQISRAEEDIVEEGILYIDGFSSIAKIDEDFICATLDWWP
PSKCDYGTCSWGNASLLNLDLSNKVFFNAIRAFSPLTIRLGGTLQDRLIYQTKHDKQPCT
PFLHDDTELLKFTQGCLPFSRWDELNEFFKRTGAKVTFGLNTLNGKKIASDGRTALGDWD
SSNAASLIRYTVSRGYTIHGWELGNELNGNGIGPAISADQYAYDVIALHKLVQDIYKGKD
VVPLILAPGGIFDAIWFPKFINKASNSLQVVTHHIYSVGGGNDPNLVQKILEPSHLDEES
KYLQNLQGVLRNSGTSAVAWVGESGGVYNSGRNLVSNSFVSSFWYLDQIGMSATFDTKKY
CRQTLVGGNYGLLNTTTFHPNPDYYGALLWHRLMGRNVLSTQFQGMKKLRSYAHCSKSSE
GITLMLINMHGSKTVNINLSVTLANTNESSMLLQVTNDQNPRHGIEREEYHLTAKDGDLH
SQTVLLNGKELNVDHFGRIPLLKPIRVNPSDPISIAPLSIVFVHIPTIQVPACNMSTREN
M*

Transcript Sequence

Transcript ID

PGSC0003DMT400028645
Transcript Infomation

pacid=37478839 locus=PGSC0003DMG400011026 ID=PGSC0003DMT400028645.v4.03 annot-version=v4.03
Sequence

ATGGCTTCTTCCTTCAGATGCTTCTTAGTGTTGTACTTCTTGCTATTGTCCTTGTACTTC
ACCCAAATTTCAAGAGCAGAAGAAGATATTGTTGAAGAAGGGATTCTATACATTGATGGG
TTTTCTTCAATTGCAAAAATTGATGAAGATTTTATTTGTGCAACTTTAGATTGGTGGCCT
CCTAGTAAATGTGACTATGGAACTTGTAGCTGGGGAAATGCTTCTCTTCTTAATCTTGAT
CTAAGCAACAAGGTATTTTTCAATGCAATTAGAGCGTTTTCTCCGTTAACAATTAGACTT
GGAGGCACATTGCAAGATAGACTAATATACCAAACGAAGCATGATAAACAACCATGTACT
CCTTTTCTCCATGATGATACAGAGCTGTTAAAATTCACCCAAGGTTGCTTGCCTTTCTCT
CGTTGGGATGAACTCAACGAATTCTTCAAGAGAACGGGGGCAAAAGTAACTTTTGGGTTG
AATACTTTAAATGGAAAGAAAATAGCTTCTGATGGCCGCACTGCTTTGGGAGATTGGGAT
TCCAGCAATGCAGCGTCTTTAATCAGATATACAGTTAGCAGAGGTTATACTATCCACGGC
TGGGAGCTTGGAAATGAATTGAATGGAAACGGAATAGGTCCAGCTATTTCAGCCGATCAG
TACGCTTATGATGTTATAGCTCTTCACAAATTAGTGCAAGATATATATAAAGGGAAGGAT
GTTGTGCCATTAATCCTTGCACCAGGAGGAATATTTGATGCTATTTGGTTTCCAAAATTT
ATAAATAAAGCATCCAATTCTCTTCAAGTAGTTACACATCACATTTACAGTGTTGGTGGA
GGCAATGACCCCAACCTAGTTCAGAAAATACTTGAACCTTCTCATCTGGATGAAGAATCC
AAATACTTGCAAAATCTTCAAGGCGTTCTCCGAAATTCTGGAACTTCAGCTGTAGCATGG
GTTGGTGAAAGTGGAGGAGTTTATAACAGTGGTCGCAATCTTGTTTCAAATAGCTTCGTG
TCCAGCTTTTGGTACTTGGATCAGATTGGGATGTCAGCCACGTTCGATACTAAGAAATAT
TGTCGACAAACATTGGTTGGTGGCAACTACGGTCTCCTCAACACCACAACCTTTCATCCA
AATCCTGATTATTATGGTGCTCTTTTATGGCATCGTTTGATGGGAAGGAATGTTCTATCG
ACACAGTTCCAAGGAATGAAAAAACTGCGCTCATACGCTCACTGTTCAAAATCTTCTGAA
GGAATCACACTGATGTTGATCAACATGCATGGTAGTAAAACAGTTAATATTAATCTTTCA
GTCACACTTGCTAACACAAACGAGTCGTCAATGCTGCTACAAGTCACGAATGATCAGAAC
CCGAGACACGGAATTGAGAGGGAAGAATATCACCTTACAGCCAAAGATGGTGATTTACAT
AGCCAAACAGTGCTTTTGAATGGAAAGGAACTTAATGTGGATCATTTTGGAAGAATCCCT
CTCTTGAAACCTATAAGAGTGAACCCCTCTGATCCAATTTCCATTGCTCCTCTTTCAATT
GTATTTGTTCACATTCCCACTATTCAAGTGCCTGCTTGTAATATGTCTACTAGAGAGAAC
ATGTAA