Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400028644
CDS Infomation

pacid=37480283 polypeptide=PGSC0003DMP400019474 locus=PGSC0003DMG400011025 ID=PGSC0003DMT400028644.v4.03 annot-version=v4.03
Sequence

ATGGCGGAAGAGAATTCAAGGAGCAAGAAAACGATTCCACCGTATATGAAGGCCATTTCC
GGCTCATTAGGTGGAATCGTTGAAGCTAGTTGTTTGCAACCGATCGACGTTATCAAAACC
CGGCTTCAACTGGACCGGGCCGGTGCTTACAAGGGGATTGTCCACTGCGGTTCTACCATT
GTTAATAACGAAGGTGTAAGGGCTTTGTGGAAAGGATTGACGCCATTCGCTACTCATTTG
ACTCTCAAGTATGCGTTGCGTATGGGTTCAAATGCGGTTTTTCAGACAGCTTTTAAGGAC
TCGGAAACGGGTAAGCTTAGCCCGCAGGGTCGGTTGATGGCTGGTTTTGGTGCTGGCGTG
CTTGAAGCTCTTGTTATTGTCACGCCCTTTGAGGTGGTGAAGATTAGACTACAGCAGCAG
AGAGGATTAAGTCCTGAGCTATTGCGATACAAGGGACCTGTACACTGTGCTCGTATGATT
GTTCGTGAAGAAGGCATTCTCGGTCTCTGGGCAGGTGCGTCGCCAACAGTTATGCGTAAT
GGTACGAATCAGGCTGCCATGTTTACTGCCAAGAATGCATTTGACACAATATTGTGGAAG
AAACATGAAGGTGATGGGAAAGTTCTTCATCCATGGCAGTCTATGATATCAGGATTCCTG
GCAGGGACAGCTGGTCCTATATGCACCGGTCCATTTGACGTTGTGAAAACAAGGCTCATG
GCTCAGAGTAAAACTGTGGGCGAGTTGAAGTACAGAGGAATGTTTCATGCCATCGCAACA
ATACATGCAGAAGAAGGATTACGTGCCTTATGGAAAGGACTAATTCCCCGGCTCATGAGG
ATCCCACCTGGACAGGCAATTATGTGGGCTGTGGCTGACCAAATAACTGGCTTTTACGAG
AGGACATACTTGACAAATGCACCCTTATAG

Peptide Sequence

PEP ID

PGSC0003DMP400019474
PEP Infomation

pacid=37480283 transcript=PGSC0003DMT400028644 locus=PGSC0003DMG400011025 ID=PGSC0003DMT400028644.v4.03 annot-version=v4.03
Sequence

MAEENSRSKKTIPPYMKAISGSLGGIVEASCLQPIDVIKTRLQLDRAGAYKGIVHCGSTI
VNNEGVRALWKGLTPFATHLTLKYALRMGSNAVFQTAFKDSETGKLSPQGRLMAGFGAGV
LEALVIVTPFEVVKIRLQQQRGLSPELLRYKGPVHCARMIVREEGILGLWAGASPTVMRN
GTNQAAMFTAKNAFDTILWKKHEGDGKVLHPWQSMISGFLAGTAGPICTGPFDVVKTRLM
AQSKTVGELKYRGMFHAIATIHAEEGLRALWKGLIPRLMRIPPGQAIMWAVADQITGFYE
RTYLTNAPL*

Transcript Sequence

Transcript ID

PGSC0003DMT400028644
Transcript Infomation

pacid=37480283 locus=PGSC0003DMG400011025 ID=PGSC0003DMT400028644.v4.03 annot-version=v4.03
Sequence

ATGGCGGAAGAGAATTCAAGGAGCAAGAAAACGATTCCACCGTATATGAAGGCCATTTCC
GGCTCATTAGGTGGAATCGTTGAAGCTAGTTGTTTGCAACCGATCGACGTTATCAAAACC
CGGCTTCAACTGGACCGGGCCGGTGCTTACAAGGGGATTGTCCACTGCGGTTCTACCATT
GTTAATAACGAAGGTGTAAGGGCTTTGTGGAAAGGATTGACGCCATTCGCTACTCATTTG
ACTCTCAAGTATGCGTTGCGTATGGGTTCAAATGCGGTTTTTCAGACAGCTTTTAAGGAC
TCGGAAACGGGTAAGCTTAGCCCGCAGGGTCGGTTGATGGCTGGTTTTGGTGCTGGCGTG
CTTGAAGCTCTTGTTATTGTCACGCCCTTTGAGGTGGTGAAGATTAGACTACAGCAGCAG
AGAGGATTAAGTCCTGAGCTATTGCGATACAAGGGACCTGTACACTGTGCTCGTATGATT
GTTCGTGAAGAAGGCATTCTCGGTCTCTGGGCAGGTGCGTCGCCAACAGTTATGCGTAAT
GGTACGAATCAGGCTGCCATGTTTACTGCCAAGAATGCATTTGACACAATATTGTGGAAG
AAACATGAAGGTGATGGGAAAGTTCTTCATCCATGGCAGTCTATGATATCAGGATTCCTG
GCAGGGACAGCTGGTCCTATATGCACCGGTCCATTTGACGTTGTGAAAACAAGGCTCATG
GCTCAGAGTAAAACTGTGGGCGAGTTGAAGTACAGAGGAATGTTTCATGCCATCGCAACA
ATACATGCAGAAGAAGGATTACGTGCCTTATGGAAAGGACTAATTCCCCGGCTCATGAGG
ATCCCACCTGGACAGGCAATTATGTGGGCTGTGGCTGACCAAATAACTGGCTTTTACGAG
AGGACATACTTGACAAATGCACCCTTATAG