Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400028628
CDS Infomation

pacid=37476702 polypeptide=PGSC0003DMP400019461 locus=PGSC0003DMG400011018 ID=PGSC0003DMT400028628.v4.03 annot-version=v4.03
Sequence

ATGAATCCCACCACTGCGGACCCAACACAGCCACCGCCACTTCCACCGCCGCAGCCACCT
CGTTCTTCTTTCAGTTGTGACAGACACCCAGATGAAGATTTCACAGGATTCTGCCCAGAA
TGCCTCTGTGAACGCCTCACCACCTTAGATCAGACTGCAGCTAATAATAACAATCCTTCT
TCTTCTTCACGTCGACCTTCTACTTCATCTGCTTCTGCTATTAAAGCCCTTTTCTCTAAA
ACTTCTACATTTTCTACTTTTAACCAGAAGCATCCTCCTCTTCCTCCTAAACCCTCTAAA
CCCACTTCATTTTCCCCCGAACTTCGCCGGACTAAGTCGTTTTCAGCTTCTAAAAACGAA
GCGTTGAGCTATTTGGGTGGTTCTGGTTTTGAACCCCAACGTAAGTCTTGTGACGTTCGA
GTTCGTAATACACTTTGGTCCTTATTTTCCCTCGACGGAGAGGCTAAAAACCCTCATTCT
GAGGATACTGGTGATGCATCTGTGAATAGGCCTGTTATTGAGTTAAAAGAAGAAGAGGAA
GAGGAACCAGAAAACGATCAAATCAGCCATATAGGTAACGGAAATGTGGTAAATGAAATA
ACTGAAGAGTCCCCTGTGGAGAACAGTTTTTGCAGAGAGGTCGATTCAGAAATTGTGGAA
GAAGAGCTGGTGAATGGGGATATATTGAAGCCGATGAAAGATCACATAGATCTCGATTCG
CAGGTGAAAAAGCCTTCAGGTGGAAGGGACTTGAAGGAAATTGCAGGAAGCTTCTTGTCT
GCTGCATCAGTTTTCAGCAAGAAATGGCACAATTGGAGGCGAAAACAGAAGGTGAAAAAA
CGAAACAATTGTGAGAACTCATCTACACTGTCATTGGAGAAGCCCATTTCGAGAAAATTC
AGGGATACTCAGTCTGAGATTGCTGATTATGGATTTGGGAGGAGGTCCTGTGACACTGAA
CCTCGATTTTCTCTCGATATTGGGAGGATTAGTATTGATGATCCAAGGTACTCCTTTGAT
GAGCCTCGAGCTTCTTGTGATGTCCACTTCATGGGAAGGAGCATTCCCAGGGTTCCGCCT
ATGGTTTCAGTGATAGAAGATGCACCAGTGGTGCATGTTCAAAGGGCTGACGACCAAATT
CCGGTTGAAGAGTCGCCTGTTTCAGCGAATTGTATTGGTGAGGAAACTGATTTGCCTGGA
GGGTCTGCTCAAACAAGGGACTATTACTTGGATTCGTCTTCGAGGCGAAGGAAGAGTCTT
GATAGATCTAACTCAATTAGGAAAACAGCAGCTGCTGTAGTGGCAGAGATTGATGAAATG
AAGGCAGTGTCCAATGCTAAAGTTCAGCCTGAGAGGGATTTGAATTCGATTTCCAATTCC
AATTCTTTAAGGGATGATTTCTCGGAGACTTTTGAATTGACAGGGTTTAAGGATACTGCT
TCTGGGATTGGAAATGGGGAACGAAAGGGATCGAAAAAGTCGAAGAAGTGGGCCTGGAAT
ATATGGGGTTTTATACATAGGAAAGGTAATGGAAACAAAGATGAGGAAGATGACAGGTAT
AGTAGATCAAATGGAGTGGAGAGGTCATTTTCAGGATCTTGGCAAGACATGAGGAGGGAG
ACAAATGGTGATTTAAAAGGGAGTCTTAATAGGAATATGTTTAGGAGTAATAGCAGTGTT
AGTTGGAGAAACTCAACTAATATTGGTGGATCTTTTGGAACTGTGAGGAATCTTGGCATT
GACACTAATGTCAATGGTAAAAAGAAAGACGATTTCGTGTTGGAGAGGAACCGGAGTGCA
AGGTATTCACCTAATCATATCGATAATGGGTTCTTGCGGTTCCATTTTGCTCCCATGAGA
GGCAGCCGGAGAAGTTTACCAGCACAAAGTAGGCCAAATGGGAGGAGCGTACTTCGCCTA
TACTGA

Peptide Sequence

PEP ID

PGSC0003DMP400019461
PEP Infomation

pacid=37476702 transcript=PGSC0003DMT400028628 locus=PGSC0003DMG400011018 ID=PGSC0003DMT400028628.v4.03 annot-version=v4.03
Sequence

MNPTTADPTQPPPLPPPQPPRSSFSCDRHPDEDFTGFCPECLCERLTTLDQTAANNNNPS
SSSRRPSTSSASAIKALFSKTSTFSTFNQKHPPLPPKPSKPTSFSPELRRTKSFSASKNE
ALSYLGGSGFEPQRKSCDVRVRNTLWSLFSLDGEAKNPHSEDTGDASVNRPVIELKEEEE
EEPENDQISHIGNGNVVNEITEESPVENSFCREVDSEIVEEELVNGDILKPMKDHIDLDS
QVKKPSGGRDLKEIAGSFLSAASVFSKKWHNWRRKQKVKKRNNCENSSTLSLEKPISRKF
RDTQSEIADYGFGRRSCDTEPRFSLDIGRISIDDPRYSFDEPRASCDVHFMGRSIPRVPP
MVSVIEDAPVVHVQRADDQIPVEESPVSANCIGEETDLPGGSAQTRDYYLDSSSRRRKSL
DRSNSIRKTAAAVVAEIDEMKAVSNAKVQPERDLNSISNSNSLRDDFSETFELTGFKDTA
SGIGNGERKGSKKSKKWAWNIWGFIHRKGNGNKDEEDDRYSRSNGVERSFSGSWQDMRRE
TNGDLKGSLNRNMFRSNSSVSWRNSTNIGGSFGTVRNLGIDTNVNGKKKDDFVLERNRSA
RYSPNHIDNGFLRFHFAPMRGSRRSLPAQSRPNGRSVLRLY*

Transcript Sequence

Transcript ID

PGSC0003DMT400028628
Transcript Infomation

pacid=37476702 locus=PGSC0003DMG400011018 ID=PGSC0003DMT400028628.v4.03 annot-version=v4.03
Sequence

ATGAATCCCACCACTGCGGACCCAACACAGCCACCGCCACTTCCACCGCCGCAGCCACCT
CGTTCTTCTTTCAGTTGTGACAGACACCCAGATGAAGATTTCACAGGATTCTGCCCAGAA
TGCCTCTGTGAACGCCTCACCACCTTAGATCAGACTGCAGCTAATAATAACAATCCTTCT
TCTTCTTCACGTCGACCTTCTACTTCATCTGCTTCTGCTATTAAAGCCCTTTTCTCTAAA
ACTTCTACATTTTCTACTTTTAACCAGAAGCATCCTCCTCTTCCTCCTAAACCCTCTAAA
CCCACTTCATTTTCCCCCGAACTTCGCCGGACTAAGTCGTTTTCAGCTTCTAAAAACGAA
GCGTTGAGCTATTTGGGTGGTTCTGGTTTTGAACCCCAACGTAAGTCTTGTGACGTTCGA
GTTCGTAATACACTTTGGTCCTTATTTTCCCTCGACGGAGAGGCTAAAAACCCTCATTCT
GAGGATACTGGTGATGCATCTGTGAATAGGCCTGTTATTGAGTTAAAAGAAGAAGAGGAA
GAGGAACCAGAAAACGATCAAATCAGCCATATAGGTAACGGAAATGTGGTAAATGAAATA
ACTGAAGAGTCCCCTGTGGAGAACAGTTTTTGCAGAGAGGTCGATTCAGAAATTGTGGAA
GAAGAGCTGGTGAATGGGGATATATTGAAGCCGATGAAAGATCACATAGATCTCGATTCG
CAGGTGAAAAAGCCTTCAGGTGGAAGGGACTTGAAGGAAATTGCAGGAAGCTTCTTGTCT
GCTGCATCAGTTTTCAGCAAGAAATGGCACAATTGGAGGCGAAAACAGAAGGTGAAAAAA
CGAAACAATTGTGAGAACTCATCTACACTGTCATTGGAGAAGCCCATTTCGAGAAAATTC
AGGGATACTCAGTCTGAGATTGCTGATTATGGATTTGGGAGGAGGTCCTGTGACACTGAA
CCTCGATTTTCTCTCGATATTGGGAGGATTAGTATTGATGATCCAAGGTACTCCTTTGAT
GAGCCTCGAGCTTCTTGTGATGTCCACTTCATGGGAAGGAGCATTCCCAGGGTTCCGCCT
ATGGTTTCAGTGATAGAAGATGCACCAGTGGTGCATGTTCAAAGGGCTGACGACCAAATT
CCGGTTGAAGAGTCGCCTGTTTCAGCGAATTGTATTGGTGAGGAAACTGATTTGCCTGGA
GGGTCTGCTCAAACAAGGGACTATTACTTGGATTCGTCTTCGAGGCGAAGGAAGAGTCTT
GATAGATCTAACTCAATTAGGAAAACAGCAGCTGCTGTAGTGGCAGAGATTGATGAAATG
AAGGCAGTGTCCAATGCTAAAGTTCAGCCTGAGAGGGATTTGAATTCGATTTCCAATTCC
AATTCTTTAAGGGATGATTTCTCGGAGACTTTTGAATTGACAGGGTTTAAGGATACTGCT
TCTGGGATTGGAAATGGGGAACGAAAGGGATCGAAAAAGTCGAAGAAGTGGGCCTGGAAT
ATATGGGGTTTTATACATAGGAAAGGTAATGGAAACAAAGATGAGGAAGATGACAGGTAT
AGTAGATCAAATGGAGTGGAGAGGTCATTTTCAGGATCTTGGCAAGACATGAGGAGGGAG
ACAAATGGTGATTTAAAAGGGAGTCTTAATAGGAATATGTTTAGGAGTAATAGCAGTGTT
AGTTGGAGAAACTCAACTAATATTGGTGGATCTTTTGGAACTGTGAGGAATCTTGGCATT
GACACTAATGTCAATGGTAAAAAGAAAGACGATTTCGTGTTGGAGAGGAACCGGAGTGCA
AGGTATTCACCTAATCATATCGATAATGGGTTCTTGCGGTTCCATTTTGCTCCCATGAGA
GGCAGCCGGAGAAGTTTACCAGCACAAAGTAGGCCAAATGGGAGGAGCGTACTTCGCCTA
TACTGA