Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400028625
CDS Infomation

pacid=37479619 polypeptide=PGSC0003DMP400019458 locus=PGSC0003DMG400011017 ID=PGSC0003DMT400028625.v4.03 annot-version=v4.03
Sequence

ATGAAAGCTAGGGTTTTCCTACTCTGTTTTCTCCTATTATCTTCAAATTTCCGTTTTCTG
CAATCTGAAGACACCATAAAAAACAAATTTCGAGAACGAGAAGCCACTGATGATTCCCTC
GCTTACCCCAATTTGGATGAAGATGAATTGTTGAATACACAGTGCCCTCAGCATTTGGAG
CTGAGATGGCAGACAGAAGTTAGTTCTAGCGTATATGCATCCCCCTTGATTGCTGATATT
AACAGTGATGGAAAGCTTGAGGTGGTAGTTCCCTCTTTTGTTCATTACTTGGAAGTTCTG
GAAGGTTCTGATGGAGATAAAGCTCCAGGATGGCCAGCATTCCATCAATCAACTGTTCAT
TCCACTCCTTTCCTATATGACATTGACAAGGATGGGGTGAGGGAGATAGGTTTGGCCACC
TATGATGGTGAGGTGCTCTTTTTCAGGGTCTCAGGATACCTGATGTCTGATAAATTGGAG
ATTCCTCGGCTGAGAGTTAAAAAAGATTGGCATGTGGGTTTGAAACAGGACCCGGTGGAC
CGTTCTCATCCAGATGTACATGATGACCAACTTGTACAGGAGGCTGTCATGGACTCCATA
GCCAGTCACAATGCATCCACTCATGGAGGCAACCATTCAAAATCTACTGCATCTGAAGTT
AACACTGAAACCCATTCTATTCAAAAAGAAGTCAACCATGATGCATCGAATGCTTCAATA
TCTTTGCCGTCAGGAGTTTCACCTAACACATCAAATTCATCTAATTTAGAGGACCAAAAG
GGGAAAAATGATAGTCTAGCTGGTGGAGAAGTTAAAATGACTAACTTAAACAATATTACT
CTGAATTCTGATAATGAGAAAATCAGTGTCTCGGAGAATGGAACAAGTAAAGGGAGAAGG
CTTCTTGAAGATAATGTCTTGAGAAGTTCGGAGGAAAGTGATTCTGGATCCAAAGATGTT
AGAGCTGCAACTGTGGAAAATGAAGGGGGTCTGGAAGCGGAAGCTGATTCATCTTTTGAG
TTATTCCGGGATAATGAGGATATCCCTGATGATTATGATTATGACGATGATGATTACCTT
GATGATGATGAATTATGGAAAAATGAAGAATTTGAGGAACCAGAACATGAGAAATTGGAG
AATTATGTTCATATTGATGCTCATGTTTTATGTACTCCTGTCATTGCTGACATTGACAGT
GATGGGGTGTCGGAGATGATTGTTGCAGTATCCTACTTCTTTGACCATGAGTACTATAAC
AATCAGGAGCATATAAAGGAACTTGGAGACATTGAAATAGGAAAATATGTTGCTAGTGGT
ATTGTTGTTTTCAATCTAGATACCAAGCAAGTTAAATGGACTGCACAGTTGGACTTAAGT
ACTGACGACGGGAAATTCCGTGCCTATATATACTCTTCTCCTACGGTAGTTGATTTGGAT
GGTGATGGAAACATGGACATTCTAGTGGGGACCTCCTATGGCTTCTTTTATGTGTTGGAT
CACAACGGCAAAGTGAGGGAAAAGTTCCCTCTCGAAATGGCTGAAATCCAAGGAGCAGTA
GTTGCAGCTGATATCAATGATGATGGAAAGATTGAACTAGTTACAACAGATTCACATGGA
AATGTTGCTGCTTGGACCGCACAAGGCACAGAAATTTGGGAAACGCATCTCAAGAGCCTT
GTTCCTCAGGGACCGGTTATTGGCGATGTGGATGGAGATGGCCATACAGATGTCGTTGTC
CCAACACTTTCTGGGAATATTTATGTTCTGAATGGCAAGGACGGCTCATTTGTACGTCCA
TATCCTTATAGGACTCATGGTAGGGTGATGAATCGAGCACTTCTTGTCGACTTGAGCAAA
CGTGGGGAGAAGAAAAAAGGGCTTACAATTGTCACAATGTCATTTGATGGTTATTTGTAT
CTCATAGATGGACCAACATCATGTGCTGATGTTGTAGATATTGGTGAAACTTCATACAGC
ATGGTCTTGGCTGATAATGTTGATGGTGGCGATGATCTTGATCTTATTGTAACAACCATG
AATGGTAATGTCTTCTGTTTCTCCACGCCTGCCCCACATCATCCCCACAAGACTTGGAGA
TCTCCTAATCAAGGGAGAAACAATGCTGCTTACCGTAATGATCGTCAGGGGATCTATGCA
ACTCCATCTTCAAGAGCTTTCCGTGATGAAGAGGGCAAGAGCTTCTGGGTTGAAATAGAG
ATTGTTGATAAATACAGATACCCATCTGGGTCTCAAGCTCCTTATAATGTCACGGTGAGC
TTGTTAGTTCCTGGTAATTACCAAGGGGAACGAACTATTAAGCAAAATAAGATATTCGAT
CGTCCTGGTAAACATCGGATTATGCTCCCAACTGTTAGTGTAAGGACTGCTGGGACTGTT
TTGTTGGAGATGGTTGACAAGAACGGGCTATATTTCTCAGATGATTTTTCTCTAACATTC
CATATGCATTATTATAAGCTATTGAAATGGATTCTCGTACTCCCTATGCTGGGAATGTTT
GGTGTGCTTGTCATCCTTCGTCCACAAGAGGCCATGCCACTACCATCATTTTCACGGAAC
ACTGATTTGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400019458
PEP Infomation

pacid=37479619 transcript=PGSC0003DMT400028625 locus=PGSC0003DMG400011017 ID=PGSC0003DMT400028625.v4.03 annot-version=v4.03
Sequence

MKARVFLLCFLLLSSNFRFLQSEDTIKNKFREREATDDSLAYPNLDEDELLNTQCPQHLE
LRWQTEVSSSVYASPLIADINSDGKLEVVVPSFVHYLEVLEGSDGDKAPGWPAFHQSTVH
STPFLYDIDKDGVREIGLATYDGEVLFFRVSGYLMSDKLEIPRLRVKKDWHVGLKQDPVD
RSHPDVHDDQLVQEAVMDSIASHNASTHGGNHSKSTASEVNTETHSIQKEVNHDASNASI
SLPSGVSPNTSNSSNLEDQKGKNDSLAGGEVKMTNLNNITLNSDNEKISVSENGTSKGRR
LLEDNVLRSSEESDSGSKDVRAATVENEGGLEAEADSSFELFRDNEDIPDDYDYDDDDYL
DDDELWKNEEFEEPEHEKLENYVHIDAHVLCTPVIADIDSDGVSEMIVAVSYFFDHEYYN
NQEHIKELGDIEIGKYVASGIVVFNLDTKQVKWTAQLDLSTDDGKFRAYIYSSPTVVDLD
GDGNMDILVGTSYGFFYVLDHNGKVREKFPLEMAEIQGAVVAADINDDGKIELVTTDSHG
NVAAWTAQGTEIWETHLKSLVPQGPVIGDVDGDGHTDVVVPTLSGNIYVLNGKDGSFVRP
YPYRTHGRVMNRALLVDLSKRGEKKKGLTIVTMSFDGYLYLIDGPTSCADVVDIGETSYS
MVLADNVDGGDDLDLIVTTMNGNVFCFSTPAPHHPHKTWRSPNQGRNNAAYRNDRQGIYA
TPSSRAFRDEEGKSFWVEIEIVDKYRYPSGSQAPYNVTVSLLVPGNYQGERTIKQNKIFD
RPGKHRIMLPTVSVRTAGTVLLEMVDKNGLYFSDDFSLTFHMHYYKLLKWILVLPMLGMF
GVLVILRPQEAMPLPSFSRNTDL*

Transcript Sequence

Transcript ID

PGSC0003DMT400028625
Transcript Infomation

pacid=37479619 locus=PGSC0003DMG400011017 ID=PGSC0003DMT400028625.v4.03 annot-version=v4.03
Sequence

ATGAAAGCTAGGGTTTTCCTACTCTGTTTTCTCCTATTATCTTCAAATTTCCGTTTTCTG
CAATCTGAAGACACCATAAAAAACAAATTTCGAGAACGAGAAGCCACTGATGATTCCCTC
GCTTACCCCAATTTGGATGAAGATGAATTGTTGAATACACAGTGCCCTCAGCATTTGGAG
CTGAGATGGCAGACAGAAGTTAGTTCTAGCGTATATGCATCCCCCTTGATTGCTGATATT
AACAGTGATGGAAAGCTTGAGGTGGTAGTTCCCTCTTTTGTTCATTACTTGGAAGTTCTG
GAAGGTTCTGATGGAGATAAAGCTCCAGGATGGCCAGCATTCCATCAATCAACTGTTCAT
TCCACTCCTTTCCTATATGACATTGACAAGGATGGGGTGAGGGAGATAGGTTTGGCCACC
TATGATGGTGAGGTGCTCTTTTTCAGGGTCTCAGGATACCTGATGTCTGATAAATTGGAG
ATTCCTCGGCTGAGAGTTAAAAAAGATTGGCATGTGGGTTTGAAACAGGACCCGGTGGAC
CGTTCTCATCCAGATGTACATGATGACCAACTTGTACAGGAGGCTGTCATGGACTCCATA
GCCAGTCACAATGCATCCACTCATGGAGGCAACCATTCAAAATCTACTGCATCTGAAGTT
AACACTGAAACCCATTCTATTCAAAAAGAAGTCAACCATGATGCATCGAATGCTTCAATA
TCTTTGCCGTCAGGAGTTTCACCTAACACATCAAATTCATCTAATTTAGAGGACCAAAAG
GGGAAAAATGATAGTCTAGCTGGTGGAGAAGTTAAAATGACTAACTTAAACAATATTACT
CTGAATTCTGATAATGAGAAAATCAGTGTCTCGGAGAATGGAACAAGTAAAGGGAGAAGG
CTTCTTGAAGATAATGTCTTGAGAAGTTCGGAGGAAAGTGATTCTGGATCCAAAGATGTT
AGAGCTGCAACTGTGGAAAATGAAGGGGGTCTGGAAGCGGAAGCTGATTCATCTTTTGAG
TTATTCCGGGATAATGAGGATATCCCTGATGATTATGATTATGACGATGATGATTACCTT
GATGATGATGAATTATGGAAAAATGAAGAATTTGAGGAACCAGAACATGAGAAATTGGAG
AATTATGTTCATATTGATGCTCATGTTTTATGTACTCCTGTCATTGCTGACATTGACAGT
GATGGGGTGTCGGAGATGATTGTTGCAGTATCCTACTTCTTTGACCATGAGTACTATAAC
AATCAGGAGCATATAAAGGAACTTGGAGACATTGAAATAGGAAAATATGTTGCTAGTGGT
ATTGTTGTTTTCAATCTAGATACCAAGCAAGTTAAATGGACTGCACAGTTGGACTTAAGT
ACTGACGACGGGAAATTCCGTGCCTATATATACTCTTCTCCTACGGTAGTTGATTTGGAT
GGTGATGGAAACATGGACATTCTAGTGGGGACCTCCTATGGCTTCTTTTATGTGTTGGAT
CACAACGGCAAAGTGAGGGAAAAGTTCCCTCTCGAAATGGCTGAAATCCAAGGAGCAGTA
GTTGCAGCTGATATCAATGATGATGGAAAGATTGAACTAGTTACAACAGATTCACATGGA
AATGTTGCTGCTTGGACCGCACAAGGCACAGAAATTTGGGAAACGCATCTCAAGAGCCTT
GTTCCTCAGGGACCGGTTATTGGCGATGTGGATGGAGATGGCCATACAGATGTCGTTGTC
CCAACACTTTCTGGGAATATTTATGTTCTGAATGGCAAGGACGGCTCATTTGTACGTCCA
TATCCTTATAGGACTCATGGTAGGGTGATGAATCGAGCACTTCTTGTCGACTTGAGCAAA
CGTGGGGAGAAGAAAAAAGGGCTTACAATTGTCACAATGTCATTTGATGGTTATTTGTAT
CTCATAGATGGACCAACATCATGTGCTGATGTTGTAGATATTGGTGAAACTTCATACAGC
ATGGTCTTGGCTGATAATGTTGATGGTGGCGATGATCTTGATCTTATTGTAACAACCATG
AATGGTAATGTCTTCTGTTTCTCCACGCCTGCCCCACATCATCCCCACAAGACTTGGAGA
TCTCCTAATCAAGGGAGAAACAATGCTGCTTACCGTAATGATCGTCAGGGGATCTATGCA
ACTCCATCTTCAAGAGCTTTCCGTGATGAAGAGGGCAAGAGCTTCTGGGTTGAAATAGAG
ATTGTTGATAAATACAGATACCCATCTGGGTCTCAAGCTCCTTATAATGTCACGGTGAGC
TTGTTAGTTCCTGGTAATTACCAAGGGGAACGAACTATTAAGCAAAATAAGATATTCGAT
CGTCCTGGTAAACATCGGATTATGCTCCCAACTGTTAGTGTAAGGACTGCTGGGACTGTT
TTGTTGGAGATGGTTGACAAGAACGGGCTATATTTCTCAGATGATTTTTCTCTAACATTC
CATATGCATTATTATAAGCTATTGAAATGGATTCTCGTACTCCCTATGCTGGGAATGTTT
GGTGTGCTTGTCATCCTTCGTCCACAAGAGGCCATGCCACTACCATCATTTTCACGGAAC
ACTGATTTGTGA