Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400028617
CDS Infomation

pacid=37479320 polypeptide=PGSC0003DMP400019450 locus=PGSC0003DMG400011011 ID=PGSC0003DMT400028617.v4.03 annot-version=v4.03
Sequence

ATGGATCAATCGACGAGCAGAGGTGGGAAATTTGTGATTAGGGACTATGTGGTTGAGAAG
CAAATCGGGGCGGGGTCTTTCTCGACGGTGTGGCTAGCACGCCACCGTGTCAACGGCACA
GAAGTGGCGATCAAGGAGATTGTTACCGCTCGGCTCAACAGTAAACTCAAAGAGAGCCTC
AAATCTGAAATTGTTATTCTACAGAGAATCAGTCATCCTAATATTATTCACTTGCACGAC
ATGATCGAGGATCCGGGGAAAATATATATTGTTTTAGAGTACTGCAGAGGGGGTGATCTT
TCAATGTACATACAACGACGTCAAGGGAGAATCGCAGAAGCAACTGCCAAACATTTCATG
CAGCAGCTAGCATCTGGTCTAAAAGTCCTTCGCGAAAACAATCTAATCCACAGGGACCTA
AAGCCTCAGAATCTTCTATTGTCTGCAATTGATGACAACTCCACCTTGAAGATTGCTGAT
TTTGGGTTTGCAAGATCTTTGCAGCCTAGGGTGCTTGCAGAAACTCTATGCGGGTCGCCA
TTGTACATGGCTCCCGAAATAATGCAACTTCAAAAATATGATGCAAAGGCAGATCTCTGG
AGTGTTGGTGCCATTCTGTTCCAGCTAGTAACTGGCAAAACCCCATTTACTGGAAACAAT
CAAATACAGTTGCTCCAAAACATAATGAGGTCCACTAAATTGCAATTTCCTCTAGATGCC
AAGAATCTAAGTCCTCATTGCATAGATTTATGTCAAAAGTTATTGCGCCGTAATCCAGTG
GAGCGGTTGACATTTGAAGAGTTCTTTAACCACCCATTTCTTGCACAGAAGCAGCCTGAT
GAGTTGTCTAGGAATCAGAGACCTCAAAGGGTAATAGATGGGTTTTCTCTGACAGAACGC
AATCCTGTAAGGCGCACTGAGGAAACTTTTCAAGAAGATGGCTTACCATTTAGTTTAGAT
GATGATTCCAGCAATCCTGATGGTGGTCCTTCTTTTGCTGGGATATCACTGAGATCTTCC
TGTGGATTTTCTCATGATGCAAAAGATTATAGGAAAGAAGTTACAAGTGCTTCAAACAAA
ACCGGTCCTCCTTTGAATTGTAGCAACATCAACCATAAATCAAATGTTATTGGTTCTAGT
CCTGGCCAACACCGACATTCAGAAGGCAAGCTGAAGGAATCCAGTTCCATGGACCATAGA
CTATGTCCAAGAGTGGCGGATTCATTCGAATTGATTGAGCGGGAATATGTCCTTGTGTCT
GGGTCCCTCATGGACTCATCTTCTTCAGCAGGTGCTTCTAGGCTTAGCAATACACCATTT
AGATCAAGTTGTTCCCTGCAAGCCTCTGGGAACATGGACTCTAGATTAAGTGAGTCTGTG
GTTGTTGCTGGTCCTGCAACTAATAGCATAGTACTAAGGTTGGAAAGTCCCTCTTCTGCT
CCAGGAGCTTCACAAGGATCCACAGATATAGTAGACCCTCTGGAGAAGCCAACTGATGGC
ATAGCCAGAATTGAGTCGCTGCAACATTCTGCTTCTGCTATCACAGAGCTGGTCAATGAG
AAGATTGCCGCAGGCAAGCATCTGGAAGCATTTTCAATTGAGCTTGTCATGCTTGCAATA
TGGAAGCAAGCCTTGCATGTTTGTCATACACAAGCGGCATCAGCAATTGAAGGAAGTCCA
AACCAAAAAACTGCTGAATTGATGGAGATTTTAAGGGACAGTCGAGTTAGGCCTGACATT
AAAAAGGACACTTGTAACAATTTGGGGCCAGAGAATGTGTTATCTCATATTCAAAGAGCA
TTTCTGAGTGAAGTTGGGAAGGCAGAGGAACTTGCCAAACATATAGAGCCTGGAAATGCC
GAGGTACCAGATGCAATGGAGATGATATTTCAATCTGCACTAGACCTCGGCAGAAAGGGA
GCGGTTGACGAGTACATGGGTCGGACTGAAGATGCAGTGGTGTTTTATTCAAAAGCAGTA
CGCTTGTTAGCATTCCTTCAAGTAGAAGCACCATCACTCATTCTAAATCCTCCATTCTCA
CTGACAAACTCCGATCGCTATAGGCTTAGGAGTTACATTGATGTTCTCAATAACAGGCAA
AGTGTTTCAAGGTCTCAAATCATGACTGTGCTCAAGTGTGAGGATCAGCACTGA

Peptide Sequence

PEP ID

PGSC0003DMP400019450
PEP Infomation

pacid=37479320 transcript=PGSC0003DMT400028617 locus=PGSC0003DMG400011011 ID=PGSC0003DMT400028617.v4.03 annot-version=v4.03
Sequence

MDQSTSRGGKFVIRDYVVEKQIGAGSFSTVWLARHRVNGTEVAIKEIVTARLNSKLKESL
KSEIVILQRISHPNIIHLHDMIEDPGKIYIVLEYCRGGDLSMYIQRRQGRIAEATAKHFM
QQLASGLKVLRENNLIHRDLKPQNLLLSAIDDNSTLKIADFGFARSLQPRVLAETLCGSP
LYMAPEIMQLQKYDAKADLWSVGAILFQLVTGKTPFTGNNQIQLLQNIMRSTKLQFPLDA
KNLSPHCIDLCQKLLRRNPVERLTFEEFFNHPFLAQKQPDELSRNQRPQRVIDGFSLTER
NPVRRTEETFQEDGLPFSLDDDSSNPDGGPSFAGISLRSSCGFSHDAKDYRKEVTSASNK
TGPPLNCSNINHKSNVIGSSPGQHRHSEGKLKESSSMDHRLCPRVADSFELIEREYVLVS
GSLMDSSSSAGASRLSNTPFRSSCSLQASGNMDSRLSESVVVAGPATNSIVLRLESPSSA
PGASQGSTDIVDPLEKPTDGIARIESLQHSASAITELVNEKIAAGKHLEAFSIELVMLAI
WKQALHVCHTQAASAIEGSPNQKTAELMEILRDSRVRPDIKKDTCNNLGPENVLSHIQRA
FLSEVGKAEELAKHIEPGNAEVPDAMEMIFQSALDLGRKGAVDEYMGRTEDAVVFYSKAV
RLLAFLQVEAPSLILNPPFSLTNSDRYRLRSYIDVLNNRQSVSRSQIMTVLKCEDQH*

Transcript Sequence

Transcript ID

PGSC0003DMT400028617
Transcript Infomation

pacid=37479320 locus=PGSC0003DMG400011011 ID=PGSC0003DMT400028617.v4.03 annot-version=v4.03
Sequence

ATGGATCAATCGACGAGCAGAGGTGGGAAATTTGTGATTAGGGACTATGTGGTTGAGAAG
CAAATCGGGGCGGGGTCTTTCTCGACGGTGTGGCTAGCACGCCACCGTGTCAACGGCACA
GAAGTGGCGATCAAGGAGATTGTTACCGCTCGGCTCAACAGTAAACTCAAAGAGAGCCTC
AAATCTGAAATTGTTATTCTACAGAGAATCAGTCATCCTAATATTATTCACTTGCACGAC
ATGATCGAGGATCCGGGGAAAATATATATTGTTTTAGAGTACTGCAGAGGGGGTGATCTT
TCAATGTACATACAACGACGTCAAGGGAGAATCGCAGAAGCAACTGCCAAACATTTCATG
CAGCAGCTAGCATCTGGTCTAAAAGTCCTTCGCGAAAACAATCTAATCCACAGGGACCTA
AAGCCTCAGAATCTTCTATTGTCTGCAATTGATGACAACTCCACCTTGAAGATTGCTGAT
TTTGGGTTTGCAAGATCTTTGCAGCCTAGGGTGCTTGCAGAAACTCTATGCGGGTCGCCA
TTGTACATGGCTCCCGAAATAATGCAACTTCAAAAATATGATGCAAAGGCAGATCTCTGG
AGTGTTGGTGCCATTCTGTTCCAGCTAGTAACTGGCAAAACCCCATTTACTGGAAACAAT
CAAATACAGTTGCTCCAAAACATAATGAGGTCCACTAAATTGCAATTTCCTCTAGATGCC
AAGAATCTAAGTCCTCATTGCATAGATTTATGTCAAAAGTTATTGCGCCGTAATCCAGTG
GAGCGGTTGACATTTGAAGAGTTCTTTAACCACCCATTTCTTGCACAGAAGCAGCCTGAT
GAGTTGTCTAGGAATCAGAGACCTCAAAGGGTAATAGATGGGTTTTCTCTGACAGAACGC
AATCCTGTAAGGCGCACTGAGGAAACTTTTCAAGAAGATGGCTTACCATTTAGTTTAGAT
GATGATTCCAGCAATCCTGATGGTGGTCCTTCTTTTGCTGGGATATCACTGAGATCTTCC
TGTGGATTTTCTCATGATGCAAAAGATTATAGGAAAGAAGTTACAAGTGCTTCAAACAAA
ACCGGTCCTCCTTTGAATTGTAGCAACATCAACCATAAATCAAATGTTATTGGTTCTAGT
CCTGGCCAACACCGACATTCAGAAGGCAAGCTGAAGGAATCCAGTTCCATGGACCATAGA
CTATGTCCAAGAGTGGCGGATTCATTCGAATTGATTGAGCGGGAATATGTCCTTGTGTCT
GGGTCCCTCATGGACTCATCTTCTTCAGCAGGTGCTTCTAGGCTTAGCAATACACCATTT
AGATCAAGTTGTTCCCTGCAAGCCTCTGGGAACATGGACTCTAGATTAAGTGAGTCTGTG
GTTGTTGCTGGTCCTGCAACTAATAGCATAGTACTAAGGTTGGAAAGTCCCTCTTCTGCT
CCAGGAGCTTCACAAGGATCCACAGATATAGTAGACCCTCTGGAGAAGCCAACTGATGGC
ATAGCCAGAATTGAGTCGCTGCAACATTCTGCTTCTGCTATCACAGAGCTGGTCAATGAG
AAGATTGCCGCAGGCAAGCATCTGGAAGCATTTTCAATTGAGCTTGTCATGCTTGCAATA
TGGAAGCAAGCCTTGCATGTTTGTCATACACAAGCGGCATCAGCAATTGAAGGAAGTCCA
AACCAAAAAACTGCTGAATTGATGGAGATTTTAAGGGACAGTCGAGTTAGGCCTGACATT
AAAAAGGACACTTGTAACAATTTGGGGCCAGAGAATGTGTTATCTCATATTCAAAGAGCA
TTTCTGAGTGAAGTTGGGAAGGCAGAGGAACTTGCCAAACATATAGAGCCTGGAAATGCC
GAGGTACCAGATGCAATGGAGATGATATTTCAATCTGCACTAGACCTCGGCAGAAAGGGA
GCGGTTGACGAGTACATGGGTCGGACTGAAGATGCAGTGGTGTTTTATTCAAAAGCAGTA
CGCTTGTTAGCATTCCTTCAAGTAGAAGCACCATCACTCATTCTAAATCCTCCATTCTCA
CTGACAAACTCCGATCGCTATAGGCTTAGGAGTTACATTGATGTTCTCAATAACAGGCAA
AGTGTTTCAAGGTCTCAAATCATGACTGTGCTCAAGTGTGAGGATCAGCACTGA