Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400028574
CDS Infomation

pacid=37479559 polypeptide=PGSC0003DMP400019429 locus=PGSC0003DMG402011001 ID=PGSC0003DMT400028574.v4.03 annot-version=v4.03
Sequence

ATGAAGATTGTCCGAGGTATCTTAAGGACTGCCAATGCTTGCCTATCTCGTTATTCTTCT
CATCATCGGACTTTTTCTGCACTTCCGAATTTTGCCCCTGATGATAGGCAAAGAACCAAC
TCATTCGAGTCTGCTGAAGACTTTGAAAGACGAATTTTTGGTGATAGTGCGGGTAACAGG
CCAAGTCCAAACTCCTTTTTCAGAAAGCTTGATGACGCTGAAAAGTCTTATGATAGATCT
AGTATGGGCTCCACATTCAGTTCTGGAAACAGATCTAGTATCCTTGATGGTCTAGATGAG
AGTTTTAATACATTATCAGATGGGATGGATGGTAAGCTGAAGGAAGCAGCCAGCTATTTT
CAGGTTGATCCTGATGAAGTAGACAAAGAAGATTATGCTTACAGAGCAGATATGACCTTT
TGGCCCGGGAACACTTATGAACTCAAGGATCTTGATCTTAGAAAACCAGGAGTTCGCAAG
CCTAAAAAAAGGGATGAATTTGAAACTACGACAGAGGAAGTTTTGCGCAAAGCTGATTTC
AGGAATGTGAGATTCCTAGCTAACTTCATCACGGAGGCTGGAATTCTCCACAAGAGGAGC
AAGACTGGAATTAGTGCCAAGGCCCAAAGAAAGATTGCCAGGGAGATAAAAACTGCCAGA
GCTTTTGGTCTGATGCCTTTTACAACCATGGGAACAAAACAGTTTGTATTTGGCAGAACA
ATGGAGGACCTTGATGCAGATTATGAATATGAGATGTACGACCCCAATTTTGTCGATTCA
GAAGCTGGTCGGGAACCTTTTTAA

Peptide Sequence

PEP ID

PGSC0003DMP400019429
PEP Infomation

pacid=37479559 transcript=PGSC0003DMT400028574 locus=PGSC0003DMG402011001 ID=PGSC0003DMT400028574.v4.03 annot-version=v4.03
Sequence

MKIVRGILRTANACLSRYSSHHRTFSALPNFAPDDRQRTNSFESAEDFERRIFGDSAGNR
PSPNSFFRKLDDAEKSYDRSSMGSTFSSGNRSSILDGLDESFNTLSDGMDGKLKEAASYF
QVDPDEVDKEDYAYRADMTFWPGNTYELKDLDLRKPGVRKPKKRDEFETTTEEVLRKADF
RNVRFLANFITEAGILHKRSKTGISAKAQRKIAREIKTARAFGLMPFTTMGTKQFVFGRT
MEDLDADYEYEMYDPNFVDSEAGREPF*

Transcript Sequence

Transcript ID

PGSC0003DMT400028574
Transcript Infomation

pacid=37479559 locus=PGSC0003DMG402011001 ID=PGSC0003DMT400028574.v4.03 annot-version=v4.03
Sequence

ATGAAGATTGTCCGAGGTATCTTAAGGACTGCCAATGCTTGCCTATCTCGTTATTCTTCT
CATCATCGGACTTTTTCTGCACTTCCGAATTTTGCCCCTGATGATAGGCAAAGAACCAAC
TCATTCGAGTCTGCTGAAGACTTTGAAAGACGAATTTTTGGTGATAGTGCGGGTAACAGG
CCAAGTCCAAACTCCTTTTTCAGAAAGCTTGATGACGCTGAAAAGTCTTATGATAGATCT
AGTATGGGCTCCACATTCAGTTCTGGAAACAGATCTAGTATCCTTGATGGTCTAGATGAG
AGTTTTAATACATTATCAGATGGGATGGATGGTAAGCTGAAGGAAGCAGCCAGCTATTTT
CAGGTTGATCCTGATGAAGTAGACAAAGAAGATTATGCTTACAGAGCAGATATGACCTTT
TGGCCCGGGAACACTTATGAACTCAAGGATCTTGATCTTAGAAAACCAGGAGTTCGCAAG
CCTAAAAAAAGGGATGAATTTGAAACTACGACAGAGGAAGTTTTGCGCAAAGCTGATTTC
AGGAATGTGAGATTCCTAGCTAACTTCATCACGGAGGCTGGAATTCTCCACAAGAGGAGC
AAGACTGGAATTAGTGCCAAGGCCCAAAGAAAGATTGCCAGGGAGATAAAAACTGCCAGA
GCTTTTGGTCTGATGCCTTTTACAACCATGGGAACAAAACAGTTTGTATTTGGCAGAACA
ATGGAGGACCTTGATGCAGATTATGAATATGAGATGTACGACCCCAATTTTGTCGATTCA
GAAGCTGGTCGGGAACCTTTTTAA