Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400028546
CDS Infomation

pacid=37478486 polypeptide=PGSC0003DMP400019416 locus=PGSC0003DMG402010991 ID=PGSC0003DMT400028546.v4.03 annot-version=v4.03
Sequence

ATGGAGTTCCAATTTCCATTCAATTTCATTTTCTTATTTCTTTTCCTATCATTCCTCTAT
CTACTACTTGTGCAAAGGAAAAAATCAAGAAACTTGAACAAAAAACTTCCTCCAGGACCA
TGGAAATTGCCTTTCTTAGGAAGTATCCATCACTTGGTACTAGAAGGTGGACTTCCTCAT
CATGCACTCACAAACTTGAGCAAAAAATATGGGCCTCTCATGCACCTACAACTAGGGGAA
ATTTCTACGGTCATAGTTTCATCTACGGATATGGCCCGGGAGGTACTGAAAACTCATGAC
CTTGCTTTTGCATCGAGGCCTAAATTAGCATCCGTCGACACAATATGTTACAAGAGCACG
GACATCGCATTTACTCCTTATGGTGAATACTGGAGACAAATGCGTAAAGTATGTGTCATG
GAACTCCTCACCGCCAAGAACGTACGATCCTTTAGTTCCATCAGGAAGGACGAGGCTTCA
GGCCTCGTGCAATTCATCCAGTCATCGACATGTGGCGAGCCAATAAATGTTACGGAACGG
ATTTTATGGTACCAGAGCTCAATCACATGTAAAGCAGCATTTGGGGAATTGTTGAAAGAC
CAAGAGAAATTCATTCAAATGGTGAAGGAAGTGATGGAATTGGCAGGTGGATTTAATTTG
GCTGACATTTTCCCTTCAATCAAGATCCTTCAAGTGTTAAGTGGAGTGAGGAGTAGAATC
TTGAAAGTTCACAAAAATGTTGATGCTATTGTTGAGGATGTTATCAATGAGCACAAGAAG
AATATTGCAAGTGGTAAAAAGGGAAATGGTGCATTTGGAGGTGAAGATTTAGTTGATGTT
CTACTAAGATTAATGGAGAGTGGAGAACTCAAAATCCCAATCACCAATGACAACATCAAA
GCAATTATGATTGACTTGTTCTCTGCGGGAACAGAAACTTCATCAACAACAGCAACATGG
GCTATGACAGAAATGATGAGGAACCCAAGTGTGTTAAAAAAGGCACAAGCAGAAGTAAGA
GAAGCATTCAAAGGGAAAGAAACTTTCGATGAGGATGTTATTGAGGAATTGAAATACCTA
AAACAAGTTGTTAAAGAAACCTTCAGACTTCATCCTCCACTCCCTCTCTTAGTCCCCAGA
GAATGCAGGGAAGAAACAAACATCAACGGATACACTATCCCATTAAAAACAAGAGTCATG
GTTAATGTTTGGTCGATGGGAAGGGACCCAAAGTATTGGGAAGATGCGGAAAGCTTTATA
CCTGAGAGATTCGAGCAGAGCTCTGTGGATTTCATGGGGAATAACTTTGAGTTTCTTCCT
TTCGGTGCCGGAAGGAGAATGTGTCCTGGAATTACATTTGGTTTGATCAATGTTCATCTT
CCACTAGCCAAATTGCTCTATCATTTTGATTGGAAATTGCCTGATGGTCAGAAGTCAGAG
GATATGGACATGACTGAGGTTTCTGGAATAACTGCAGCAAGAAAGAGTGAGCTTTACTTG
ATTGCCACTCCTTATTATCCATCTCCATAA

Peptide Sequence

PEP ID

PGSC0003DMP400019416
PEP Infomation

pacid=37478486 transcript=PGSC0003DMT400028546 locus=PGSC0003DMG402010991 ID=PGSC0003DMT400028546.v4.03 annot-version=v4.03
Sequence

MEFQFPFNFIFLFLFLSFLYLLLVQRKKSRNLNKKLPPGPWKLPFLGSIHHLVLEGGLPH
HALTNLSKKYGPLMHLQLGEISTVIVSSTDMAREVLKTHDLAFASRPKLASVDTICYKST
DIAFTPYGEYWRQMRKVCVMELLTAKNVRSFSSIRKDEASGLVQFIQSSTCGEPINVTER
ILWYQSSITCKAAFGELLKDQEKFIQMVKEVMELAGGFNLADIFPSIKILQVLSGVRSRI
LKVHKNVDAIVEDVINEHKKNIASGKKGNGAFGGEDLVDVLLRLMESGELKIPITNDNIK
AIMIDLFSAGTETSSTTATWAMTEMMRNPSVLKKAQAEVREAFKGKETFDEDVIEELKYL
KQVVKETFRLHPPLPLLVPRECREETNINGYTIPLKTRVMVNVWSMGRDPKYWEDAESFI
PERFEQSSVDFMGNNFEFLPFGAGRRMCPGITFGLINVHLPLAKLLYHFDWKLPDGQKSE
DMDMTEVSGITAARKSELYLIATPYYPSP*

Transcript Sequence

Transcript ID

PGSC0003DMT400028546
Transcript Infomation

pacid=37478486 locus=PGSC0003DMG402010991 ID=PGSC0003DMT400028546.v4.03 annot-version=v4.03
Sequence

ATGGAGTTCCAATTTCCATTCAATTTCATTTTCTTATTTCTTTTCCTATCATTCCTCTAT
CTACTACTTGTGCAAAGGAAAAAATCAAGAAACTTGAACAAAAAACTTCCTCCAGGACCA
TGGAAATTGCCTTTCTTAGGAAGTATCCATCACTTGGTACTAGAAGGTGGACTTCCTCAT
CATGCACTCACAAACTTGAGCAAAAAATATGGGCCTCTCATGCACCTACAACTAGGGGAA
ATTTCTACGGTCATAGTTTCATCTACGGATATGGCCCGGGAGGTACTGAAAACTCATGAC
CTTGCTTTTGCATCGAGGCCTAAATTAGCATCCGTCGACACAATATGTTACAAGAGCACG
GACATCGCATTTACTCCTTATGGTGAATACTGGAGACAAATGCGTAAAGTATGTGTCATG
GAACTCCTCACCGCCAAGAACGTACGATCCTTTAGTTCCATCAGGAAGGACGAGGCTTCA
GGCCTCGTGCAATTCATCCAGTCATCGACATGTGGCGAGCCAATAAATGTTACGGAACGG
ATTTTATGGTACCAGAGCTCAATCACATGTAAAGCAGCATTTGGGGAATTGTTGAAAGAC
CAAGAGAAATTCATTCAAATGGTGAAGGAAGTGATGGAATTGGCAGGTGGATTTAATTTG
GCTGACATTTTCCCTTCAATCAAGATCCTTCAAGTGTTAAGTGGAGTGAGGAGTAGAATC
TTGAAAGTTCACAAAAATGTTGATGCTATTGTTGAGGATGTTATCAATGAGCACAAGAAG
AATATTGCAAGTGGTAAAAAGGGAAATGGTGCATTTGGAGGTGAAGATTTAGTTGATGTT
CTACTAAGATTAATGGAGAGTGGAGAACTCAAAATCCCAATCACCAATGACAACATCAAA
GCAATTATGATTGACTTGTTCTCTGCGGGAACAGAAACTTCATCAACAACAGCAACATGG
GCTATGACAGAAATGATGAGGAACCCAAGTGTGTTAAAAAAGGCACAAGCAGAAGTAAGA
GAAGCATTCAAAGGGAAAGAAACTTTCGATGAGGATGTTATTGAGGAATTGAAATACCTA
AAACAAGTTGTTAAAGAAACCTTCAGACTTCATCCTCCACTCCCTCTCTTAGTCCCCAGA
GAATGCAGGGAAGAAACAAACATCAACGGATACACTATCCCATTAAAAACAAGAGTCATG
GTTAATGTTTGGTCGATGGGAAGGGACCCAAAGTATTGGGAAGATGCGGAAAGCTTTATA
CCTGAGAGATTCGAGCAGAGCTCTGTGGATTTCATGGGGAATAACTTTGAGTTTCTTCCT
TTCGGTGCCGGAAGGAGAATGTGTCCTGGAATTACATTTGGTTTGATCAATGTTCATCTT
CCACTAGCCAAATTGCTCTATCATTTTGATTGGAAATTGCCTGATGGTCAGAAGTCAGAG
GATATGGACATGACTGAGGTTTCTGGAATAACTGCAGCAAGAAAGAGTGAGCTTTACTTG
ATTGCCACTCCTTATTATCCATCTCCATAA