Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400028472
CDS Infomation

pacid=37469243 polypeptide=PGSC0003DMP400019373 locus=PGSC0003DMG400010959 ID=PGSC0003DMT400028472.v4.03 annot-version=v4.03
Sequence

ATGTCTCTTAGTAAAGACCTTATATTCTTGATATTGCAATTCTGCAATGAGGAGAACCTC
ACGAAAACTGCTCACATGTTAGGGCAGGAGACAGGGTTTTTCTTTGACATGGGACATCTT
GAAGCTCTAGTGCTCGGTGGCAAGTGGGATGAGATTGAGAACTACCTTTCAGGTTTCACT
GGTGTCACTGACAGCAGATATTCTAAAAAAATGTTTTTTGAGATTAGGAAACAAAAGTTC
CTTGAGGCACTCGACAGGCAAGATCGTAAAACTGCTCTTGAGATCCTTATGAAAGATCTT
CAAGTGTTTGCCGAGCCAAATAAAGTGCTTTATGCAGAGATGACTCAGCTTCTTACATTC
GATGACTTCAGAGAACATCCTTCACTTGCTTTATATGGAGACACATTAACTGCTAGGAAC
CGCATAATGAAGCTACTTAAGGTTGTCATTGAATCAAGCCCCCAGTTTCATGGAAGACTC
GACTTTCCAGAATTAACCAAGTCAAGATTGCGCCGTCTAATTAATCAAAGCTTGAACTGG
CAGCATATTCATTGTGCAAAGCCTCAGCAAGAACCGGAGATCAAAACACTCTTCGCTGAT
CATAAGTGTTCCATACCTGAAGATCAGTCGGTTACGCAAATGCCAAGGCCTAGCCAAACC
ATATCGGCTGCAACCCCAGATCAGTCTGTTATGCAAATGCCAAGGCCTAGCCAAACCATA
TCGGCTGCAACCCCAGATCAGTCGGTTACGCAAATGCCAAGGCCTAGTGAAACCACATCG
GCTGCAAACCAAGATCAGTCGGTTACGCAAATGCCAAGGCCTAGTGAAACCACATCGGCT
GCAAACCAAGATCAGTCATTTACGCAAATGCCAAGGCCTAGCAAAAGCATATCAGCTGCA
AACCCTGATCATCGACAAATATTTTCTAGTTCGTCCATTGTAACTGATGACATAGCTTCT
GCTTCTACTTCGAAGGCTGTTCAGGATTCTGGTAATTTATCTGATGTAAACACTACAAGG
GATATGAACGAGAAAGTGTTATCCACAACTGCTCCTTGTCAAGACCAGGATGCATCGGTT
AACCTCTCGGATGACTTTCCGAAGACCGTTGAACGTGTTTTAACCATTGGCGCCAATCCA
CCAACGACCAGTGATTATCCAACAATCAGTAGCAATTATCCGACGGTCAACTATTATCCA
ACCACAATGGATTTTCACCCTGTTCAACAGACACTTCTGATAGTTGGAGACGGTGGTGGA
GGCGTAGAGCTGTGGGATGTTAGTTCTGGAAAAATGTTGTTTAGAAGAACGTTAATGATG
TGGGAAGTAGAGGCTTTTTCAGCTGAATTTCTGAAAAGTATGGGTGAAGATCCGAGGATC
TCAGTCAATCGAGTCCTATGGAGTTCCGATGGCTCTCTCTTTGGGGTTGCATCCTCTAAG
AACATTGTTCAACTATATAGTTATCATAATAATGTCAATCATGCTGAAAACCATCTGGAG
ATTGAGGCTCATTATGGCAGTGTAAATGATCTTGCATTTTCTAAGCCAAATAACCAACTT
CTTGTCATAACGTGCGGTGAGGACAAGTTGGTCAAGGTCTGGAATACTAACAATGGTGCT
AGACAATATACTTTTGAAGGTCATGGAGCGCCCGTTTACTCTCTTTGCGCTCACGTGAAG
GAAGATGTTCATTTTATATTTTCAACATCAACTAATGGTGAAATAAAAGCATGGGTGTAT
GAAAACTCGGGACCAAGTGTTTCTTATGAGGCTCCTAGTAAATGTTGCATGAGAATGCTT
TACAGTGCCAATGGTAAAAGGCTTTTTTCATGTGGGACTAATAAAGATGGAGACTCGTAC
TTGGTGGAATGGAATGAAAATGATGGTTTCATAGAAAGGACCTACCTCGGACTTGGCAAA
TGTTCTTCGGGTGTTGTGGAATTTGATATCAGCAGGAATAACTATGTGGCTGCTGGAGAT
TCCCATGTAATCAAAGTTTGGAATGTAAATGATGCTCAACTCTTGACAGTTGTCAATGCT
GGTGGAGACCTTCCTGCAAGTCCATATGTTCGATTCAACAAGAATGGCACTTTATTGGCT
GTCTCTGTGGATCAGAACAGTATCAAAATCTTAGCAAATGATGGTGGCCGCATTTTTCTT
CAAACTTCATTGGATGCCTCTACATATCTATCTACAAGAGAGATTGCAGGCAATTCCCTA
AGTGGTCCTGCTAATAGTAGCCCGATTGATGGCATTGTCCCTCCGGAAAAGACAGCAGAA
AACCTGGCAAGTATGGAGCATCACAAGATATTAGGGAATCCGAGCACCTCTAAGGTCGTC
CAAATTTCACGATGTCAATCTTTGAGGCTCCCCTCGGAAGTGAAGACAAATAAGGTGTGT
AGGTTAGCATATACTCAGGCAGGAAATATGCTTGTGGCCTTAGTCGCAGATGGTATTCAT
CTACTCTGGAAATGGTCGGAGAGTGATTCTAATTTGACTGGCCAGACAACACCAAAATGC
ACTCCTCAACTATGGCAACCACGGAGTGGGCAGAGTGGGGTGGTTTTGAAGAACAGTCTG
CCCAGTGGTGATGCAGGAGCAGTTTCACCTTGCATAGCTTTAACCAATAATGGTTTTTAT
GCACTTTCGGCATCCGGAGGAGCAGTTTCTATATTTAACTTAAACCTCTACAAGAAAATG
AAAAGTATCACGCCTCCTACACCTGCAGCAACATGTATTGCTTGCCACCCGACTAATAAC
AATGTGATTGCTGTTGGGATGGATGATTCGACAATCATTGTCTACAGTGTCCGTTCGGAG
GAGTTCATAAGCAGGCTTCAGGGACACTCAAAAAGGATTACTGGACTTGCATTCTCTAAC
ACACTGAATGTGCTTGTTTCTTCAGGAGCAGACTCTCAGATAGTGGTGTGGAATTCAACT
AACTGGGAGAGGGAGGGAAGTACAATGTTGCAGATGTCTGCAGACTGGTTACCAACAGAA
GTATCAGAGACATCTGTCGAATATCAGCGAGATGAGAAATGCTTCCTTGTCGTACATGAG
ACTCAAATTGCAATCTATGAAACAACAAAGCTAGAATGTGTGAAGCAGTGGATGATCAAA
AACTTCTGTGCACGAATTTCACATGCAACATTTTCATGTGATAGTGAGTGGATATATACT
ATTATGAAAGACGGGATCGTTTTGATACTGTCTGCTTCAGATCTCTCCCCCAAATATGAG
ATTGATCCTTCTACTTTCCTCACTTCTGATTTGAGTTCTCATGTGTTCCCTGTGGTGGTT
GCTGCTCATCCTCAAAATCCAAACCAGTTAGCTTTGGGTTTAAACGACGGTGGAGTAGTC
GTTATTGAACCTTCAGAGTCTGATGGTAGATGGTGTGAGCCACCCAAGGCGACGACTCAA
CCAATATAG

Peptide Sequence

PEP ID

PGSC0003DMP400019373
PEP Infomation

pacid=37469243 transcript=PGSC0003DMT400028472 locus=PGSC0003DMG400010959 ID=PGSC0003DMT400028472.v4.03 annot-version=v4.03
Sequence

MSLSKDLIFLILQFCNEENLTKTAHMLGQETGFFFDMGHLEALVLGGKWDEIENYLSGFT
GVTDSRYSKKMFFEIRKQKFLEALDRQDRKTALEILMKDLQVFAEPNKVLYAEMTQLLTF
DDFREHPSLALYGDTLTARNRIMKLLKVVIESSPQFHGRLDFPELTKSRLRRLINQSLNW
QHIHCAKPQQEPEIKTLFADHKCSIPEDQSVTQMPRPSQTISAATPDQSVMQMPRPSQTI
SAATPDQSVTQMPRPSETTSAANQDQSVTQMPRPSETTSAANQDQSFTQMPRPSKSISAA
NPDHRQIFSSSSIVTDDIASASTSKAVQDSGNLSDVNTTRDMNEKVLSTTAPCQDQDASV
NLSDDFPKTVERVLTIGANPPTTSDYPTISSNYPTVNYYPTTMDFHPVQQTLLIVGDGGG
GVELWDVSSGKMLFRRTLMMWEVEAFSAEFLKSMGEDPRISVNRVLWSSDGSLFGVASSK
NIVQLYSYHNNVNHAENHLEIEAHYGSVNDLAFSKPNNQLLVITCGEDKLVKVWNTNNGA
RQYTFEGHGAPVYSLCAHVKEDVHFIFSTSTNGEIKAWVYENSGPSVSYEAPSKCCMRML
YSANGKRLFSCGTNKDGDSYLVEWNENDGFIERTYLGLGKCSSGVVEFDISRNNYVAAGD
SHVIKVWNVNDAQLLTVVNAGGDLPASPYVRFNKNGTLLAVSVDQNSIKILANDGGRIFL
QTSLDASTYLSTREIAGNSLSGPANSSPIDGIVPPEKTAENLASMEHHKILGNPSTSKVV
QISRCQSLRLPSEVKTNKVCRLAYTQAGNMLVALVADGIHLLWKWSESDSNLTGQTTPKC
TPQLWQPRSGQSGVVLKNSLPSGDAGAVSPCIALTNNGFYALSASGGAVSIFNLNLYKKM
KSITPPTPAATCIACHPTNNNVIAVGMDDSTIIVYSVRSEEFISRLQGHSKRITGLAFSN
TLNVLVSSGADSQIVVWNSTNWEREGSTMLQMSADWLPTEVSETSVEYQRDEKCFLVVHE
TQIAIYETTKLECVKQWMIKNFCARISHATFSCDSEWIYTIMKDGIVLILSASDLSPKYE
IDPSTFLTSDLSSHVFPVVVAAHPQNPNQLALGLNDGGVVVIEPSESDGRWCEPPKATTQ
PI*

Transcript Sequence

Transcript ID

PGSC0003DMT400028472
Transcript Infomation

pacid=37469243 locus=PGSC0003DMG400010959 ID=PGSC0003DMT400028472.v4.03 annot-version=v4.03
Sequence

ATGTCTCTTAGTAAAGACCTTATATTCTTGATATTGCAATTCTGCAATGAGGAGAACCTC
ACGAAAACTGCTCACATGTTAGGGCAGGAGACAGGGTTTTTCTTTGACATGGGACATCTT
GAAGCTCTAGTGCTCGGTGGCAAGTGGGATGAGATTGAGAACTACCTTTCAGGTTTCACT
GGTGTCACTGACAGCAGATATTCTAAAAAAATGTTTTTTGAGATTAGGAAACAAAAGTTC
CTTGAGGCACTCGACAGGCAAGATCGTAAAACTGCTCTTGAGATCCTTATGAAAGATCTT
CAAGTGTTTGCCGAGCCAAATAAAGTGCTTTATGCAGAGATGACTCAGCTTCTTACATTC
GATGACTTCAGAGAACATCCTTCACTTGCTTTATATGGAGACACATTAACTGCTAGGAAC
CGCATAATGAAGCTACTTAAGGTTGTCATTGAATCAAGCCCCCAGTTTCATGGAAGACTC
GACTTTCCAGAATTAACCAAGTCAAGATTGCGCCGTCTAATTAATCAAAGCTTGAACTGG
CAGCATATTCATTGTGCAAAGCCTCAGCAAGAACCGGAGATCAAAACACTCTTCGCTGAT
CATAAGTGTTCCATACCTGAAGATCAGTCGGTTACGCAAATGCCAAGGCCTAGCCAAACC
ATATCGGCTGCAACCCCAGATCAGTCTGTTATGCAAATGCCAAGGCCTAGCCAAACCATA
TCGGCTGCAACCCCAGATCAGTCGGTTACGCAAATGCCAAGGCCTAGTGAAACCACATCG
GCTGCAAACCAAGATCAGTCGGTTACGCAAATGCCAAGGCCTAGTGAAACCACATCGGCT
GCAAACCAAGATCAGTCATTTACGCAAATGCCAAGGCCTAGCAAAAGCATATCAGCTGCA
AACCCTGATCATCGACAAATATTTTCTAGTTCGTCCATTGTAACTGATGACATAGCTTCT
GCTTCTACTTCGAAGGCTGTTCAGGATTCTGGTAATTTATCTGATGTAAACACTACAAGG
GATATGAACGAGAAAGTGTTATCCACAACTGCTCCTTGTCAAGACCAGGATGCATCGGTT
AACCTCTCGGATGACTTTCCGAAGACCGTTGAACGTGTTTTAACCATTGGCGCCAATCCA
CCAACGACCAGTGATTATCCAACAATCAGTAGCAATTATCCGACGGTCAACTATTATCCA
ACCACAATGGATTTTCACCCTGTTCAACAGACACTTCTGATAGTTGGAGACGGTGGTGGA
GGCGTAGAGCTGTGGGATGTTAGTTCTGGAAAAATGTTGTTTAGAAGAACGTTAATGATG
TGGGAAGTAGAGGCTTTTTCAGCTGAATTTCTGAAAAGTATGGGTGAAGATCCGAGGATC
TCAGTCAATCGAGTCCTATGGAGTTCCGATGGCTCTCTCTTTGGGGTTGCATCCTCTAAG
AACATTGTTCAACTATATAGTTATCATAATAATGTCAATCATGCTGAAAACCATCTGGAG
ATTGAGGCTCATTATGGCAGTGTAAATGATCTTGCATTTTCTAAGCCAAATAACCAACTT
CTTGTCATAACGTGCGGTGAGGACAAGTTGGTCAAGGTCTGGAATACTAACAATGGTGCT
AGACAATATACTTTTGAAGGTCATGGAGCGCCCGTTTACTCTCTTTGCGCTCACGTGAAG
GAAGATGTTCATTTTATATTTTCAACATCAACTAATGGTGAAATAAAAGCATGGGTGTAT
GAAAACTCGGGACCAAGTGTTTCTTATGAGGCTCCTAGTAAATGTTGCATGAGAATGCTT
TACAGTGCCAATGGTAAAAGGCTTTTTTCATGTGGGACTAATAAAGATGGAGACTCGTAC
TTGGTGGAATGGAATGAAAATGATGGTTTCATAGAAAGGACCTACCTCGGACTTGGCAAA
TGTTCTTCGGGTGTTGTGGAATTTGATATCAGCAGGAATAACTATGTGGCTGCTGGAGAT
TCCCATGTAATCAAAGTTTGGAATGTAAATGATGCTCAACTCTTGACAGTTGTCAATGCT
GGTGGAGACCTTCCTGCAAGTCCATATGTTCGATTCAACAAGAATGGCACTTTATTGGCT
GTCTCTGTGGATCAGAACAGTATCAAAATCTTAGCAAATGATGGTGGCCGCATTTTTCTT
CAAACTTCATTGGATGCCTCTACATATCTATCTACAAGAGAGATTGCAGGCAATTCCCTA
AGTGGTCCTGCTAATAGTAGCCCGATTGATGGCATTGTCCCTCCGGAAAAGACAGCAGAA
AACCTGGCAAGTATGGAGCATCACAAGATATTAGGGAATCCGAGCACCTCTAAGGTCGTC
CAAATTTCACGATGTCAATCTTTGAGGCTCCCCTCGGAAGTGAAGACAAATAAGGTGTGT
AGGTTAGCATATACTCAGGCAGGAAATATGCTTGTGGCCTTAGTCGCAGATGGTATTCAT
CTACTCTGGAAATGGTCGGAGAGTGATTCTAATTTGACTGGCCAGACAACACCAAAATGC
ACTCCTCAACTATGGCAACCACGGAGTGGGCAGAGTGGGGTGGTTTTGAAGAACAGTCTG
CCCAGTGGTGATGCAGGAGCAGTTTCACCTTGCATAGCTTTAACCAATAATGGTTTTTAT
GCACTTTCGGCATCCGGAGGAGCAGTTTCTATATTTAACTTAAACCTCTACAAGAAAATG
AAAAGTATCACGCCTCCTACACCTGCAGCAACATGTATTGCTTGCCACCCGACTAATAAC
AATGTGATTGCTGTTGGGATGGATGATTCGACAATCATTGTCTACAGTGTCCGTTCGGAG
GAGTTCATAAGCAGGCTTCAGGGACACTCAAAAAGGATTACTGGACTTGCATTCTCTAAC
ACACTGAATGTGCTTGTTTCTTCAGGAGCAGACTCTCAGATAGTGGTGTGGAATTCAACT
AACTGGGAGAGGGAGGGAAGTACAATGTTGCAGATGTCTGCAGACTGGTTACCAACAGAA
GTATCAGAGACATCTGTCGAATATCAGCGAGATGAGAAATGCTTCCTTGTCGTACATGAG
ACTCAAATTGCAATCTATGAAACAACAAAGCTAGAATGTGTGAAGCAGTGGATGATCAAA
AACTTCTGTGCACGAATTTCACATGCAACATTTTCATGTGATAGTGAGTGGATATATACT
ATTATGAAAGACGGGATCGTTTTGATACTGTCTGCTTCAGATCTCTCCCCCAAATATGAG
ATTGATCCTTCTACTTTCCTCACTTCTGATTTGAGTTCTCATGTGTTCCCTGTGGTGGTT
GCTGCTCATCCTCAAAATCCAAACCAGTTAGCTTTGGGTTTAAACGACGGTGGAGTAGTC
GTTATTGAACCTTCAGAGTCTGATGGTAGATGGTGTGAGCCACCCAAGGCGACGACTCAA
CCAATATAG