Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400028417
CDS Infomation

pacid=37478765 polypeptide=PGSC0003DMP400019338 locus=PGSC0003DMG400010944 ID=PGSC0003DMT400028417.v4.03 annot-version=v4.03
Sequence

ATGAGAAAGGATGCTGTTCTGTGCACCATTCCCATAGTCGGTATGGGGGGTTTAGGGAAA
ACTACTCTGGCTAAGAGGATTTTCAATGACCAACACATCGAGAAACACTTTGAAAAGAGA
ATTTGGTTGTGTCTACCTGAAATGTCTGAAATTAAGAGCTTTCTTGAACTGATCCTCGAA
TCATTGACAGAGAGGAAAGTTGAGGTCCAGAGCAGAGATATAATAGTCAAGAAGCTCCGA
GATGCATTGGGAGAAAAACAGTATTTGCTTGTCCTGGATGATTTGTGGCGTGTTGACTCT
ACTTCGTGGCACGAGTTCTTGGACACCTTGAGGGGAATAAATACATCCAGAGGAAACTGC
ATTCTCGTGACTACTCGTTCGAAGCAAGTGGCATCCATAGTAGCAGCAGATCTTCATAAG
TTGGGGAAATTAACAGATGATCATTGTTGGTCCATTTTCAAACAACGAGCATTTGTTGAT
GGGGAAGTTCCCGAGGAAATACTGAGTGTGGAGAACAAGATTGTTGAAATGTGTCAAGGT
CTACCTTTGGCTGCTAGTGTGTTGGGAGGCCTCTTTTGTAACAAGGAAAAACATGAATGG
CAGGCAATACTTGATGGCAGCTCCCTTGTTGCATCTGAAGATAGCATTAAGAATATCCTA
AAACTCAGTTATGATTATCTACCATCTCCACATCTGAAGAAATGTTTTTCTTACTTTGCA
ATATTTCCAAAAGATTTTCAGTTTGAAAAGGACCAACTAATCCAACTCTGGATGGCAGAA
GGGTTTCTTCGTCCATGTCAAGAGACCCCTGTGATGGAAGACGTTGGGAACAAGTTTTTC
CAACTCTTGTTACAATATTCCTTGCTGCAGGATGTTAATCTAGATAAGTACAACAATACA
ACACACTGTAAGATGCATGATCTTGTGCATGATTTGGCTGGAGATATCTTAAAATCTAGA
CTATTTGATCCGAAGGGAGACAATGGAGAAAAACTTTCTCAAGTTCGATACTTTGGATGG
GAATCACCAAGTGATCAAATAGATAAGATATATGAGCCAGGACGTCAGGCATCAAGGAGT
TGTCAGCCTCAATCGTCAAGCTAA

Peptide Sequence

PEP ID

PGSC0003DMP400019338
PEP Infomation

pacid=37478765 transcript=PGSC0003DMT400028417 locus=PGSC0003DMG400010944 ID=PGSC0003DMT400028417.v4.03 annot-version=v4.03
Sequence

MRKDAVLCTIPIVGMGGLGKTTLAKRIFNDQHIEKHFEKRIWLCLPEMSEIKSFLELILE
SLTERKVEVQSRDIIVKKLRDALGEKQYLLVLDDLWRVDSTSWHEFLDTLRGINTSRGNC
ILVTTRSKQVASIVAADLHKLGKLTDDHCWSIFKQRAFVDGEVPEEILSVENKIVEMCQG
LPLAASVLGGLFCNKEKHEWQAILDGSSLVASEDSIKNILKLSYDYLPSPHLKKCFSYFA
IFPKDFQFEKDQLIQLWMAEGFLRPCQETPVMEDVGNKFFQLLLQYSLLQDVNLDKYNNT
THCKMHDLVHDLAGDILKSRLFDPKGDNGEKLSQVRYFGWESPSDQIDKIYEPGRQASRS
CQPQSSS*

Transcript Sequence

Transcript ID

PGSC0003DMT400028417
Transcript Infomation

pacid=37478765 locus=PGSC0003DMG400010944 ID=PGSC0003DMT400028417.v4.03 annot-version=v4.03
Sequence

ATGAGAAAGGATGCTGTTCTGTGCACCATTCCCATAGTCGGTATGGGGGGTTTAGGGAAA
ACTACTCTGGCTAAGAGGATTTTCAATGACCAACACATCGAGAAACACTTTGAAAAGAGA
ATTTGGTTGTGTCTACCTGAAATGTCTGAAATTAAGAGCTTTCTTGAACTGATCCTCGAA
TCATTGACAGAGAGGAAAGTTGAGGTCCAGAGCAGAGATATAATAGTCAAGAAGCTCCGA
GATGCATTGGGAGAAAAACAGTATTTGCTTGTCCTGGATGATTTGTGGCGTGTTGACTCT
ACTTCGTGGCACGAGTTCTTGGACACCTTGAGGGGAATAAATACATCCAGAGGAAACTGC
ATTCTCGTGACTACTCGTTCGAAGCAAGTGGCATCCATAGTAGCAGCAGATCTTCATAAG
TTGGGGAAATTAACAGATGATCATTGTTGGTCCATTTTCAAACAACGAGCATTTGTTGAT
GGGGAAGTTCCCGAGGAAATACTGAGTGTGGAGAACAAGATTGTTGAAATGTGTCAAGGT
CTACCTTTGGCTGCTAGTGTGTTGGGAGGCCTCTTTTGTAACAAGGAAAAACATGAATGG
CAGGCAATACTTGATGGCAGCTCCCTTGTTGCATCTGAAGATAGCATTAAGAATATCCTA
AAACTCAGTTATGATTATCTACCATCTCCACATCTGAAGAAATGTTTTTCTTACTTTGCA
ATATTTCCAAAAGATTTTCAGTTTGAAAAGGACCAACTAATCCAACTCTGGATGGCAGAA
GGGTTTCTTCGTCCATGTCAAGAGACCCCTGTGATGGAAGACGTTGGGAACAAGTTTTTC
CAACTCTTGTTACAATATTCCTTGCTGCAGGATGTTAATCTAGATAAGTACAACAATACA
ACACACTGTAAGATGCATGATCTTGTGCATGATTTGGCTGGAGATATCTTAAAATCTAGA
CTATTTGATCCGAAGGGAGACAATGGAGAAAAACTTTCTCAAGTTCGATACTTTGGATGG
GAATCACCAAGTGATCAAATAGATAAGATATATGAGCCAGGACGTCAGGCATCAAGGAGT
TGTCAGCCTCAATCGTCAAGCTAA