Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400028376
CDS Infomation

pacid=37438033 polypeptide=PGSC0003DMP400019317 locus=PGSC0003DMG400010935 ID=PGSC0003DMT400028376.v4.03 annot-version=v4.03
Sequence

ATGGCTTCGAGGTTCATCTCCCTCCTCGCCACTCCATTTCCCACCTTCCTCAATCACCTA
CGACGCCCCTCTTTCCTCCACCTTCGTCGTTTGGCATGCGGTTTTCGCCGCTTCACAGTC
TACAGTCACTCCCATATATCCCCTCTTTCACCCTCTCAACAACAATTCCATGCCCAGCCC
ATCAATAATAACACCCCACTCGACTCTTCTTCTTCTTTCACCTCCCACCCTTGGCCTGAA
TGGCGTAGCTTAATTACTCTTCTTACTGGCAATGACCAGCTACCTCCTGCAGTGGAGGAC
TCCTTCGTCGCATACGAGGACTTGTCCCAAGACTTCCTTCGTGCTGCTACCCTCTGCTTA
GATTTTGCACAGGAGCGCCCAAATTTCATAGGGTTGCTTTCAAGGAGGGATATTGAGGCC
GTTGTATCAAATGGGACACCATTTTTGTTCAAAGGTGCTCTGGAGACGGCAAGAAGAATG
AGGGCATTCTTGGGTATTGACGGGAGCACTGTGCTGGATCATGACAACGCTAACACAGTT
GATCTCATGAAATACATATTAAGTTACGCGAGTAAACCCACTGTTTCTTCAGAAAAAAAC
TCCCTCTATAGCAGGGAACTTATAGAATCATCTTGCCGGAATCTTTTGCGTGAGTTGGTT
GAAGTGAGCTGCGGAGCTCCAGCAGTGAACCTGCCTCCTGCAGAGCAATATGATTTTTCA
GGTAGATATGGACAAACATCAAGGCCTATTAGACAAAATATTGTAATGAAGAGAGGCGAC
TGGATATGCCAAAAGTGCAATTTCATGAACTTTGCAAGAAACAACAAATGCCTTGAATGT
GAGGAACCTAGACCAAGGAGACAGCTGACAGGCAGGGAGTGGGAATGCCCTCAATGTTAT
TTCTTCAATTATGGGAGAAATGTTGTCTGCCTGAGATGCGACTTCGGACGACCAGCTGGG
GCTTCACCTAGAACTACCCACTCCAGTGCAGAGGATGGGTACAATGGGAACTCTGCGTAT
CCAAATGGAATTGATCTTAAGTTGGCTGAGAATGAGGAGAAGGCACAGCGGTGGTTTTCT
AAGATTTCTCAGATGAACAATGCCTCTGATATGGATAGTGCAGCAGCTGACGAAGACTTT
CCTGAAATAATGCCGCCAAGGAAAGGAGAAAATAAGTTTGTTGTGAGCACAAGGAAAACA
CCCTTGGAAAGGAGGTTGGCCAACACTCGATACGAAAGAAACTTTGGTTACAATGGTATC
CCAGAAGGTAACACTTTGACTGGTGGTGCACATAGTATCCTTGACACATCAATGAAGCAG
AATATTGATCAAATGTCTGGAAAAAGTCATAAGGGCATTGCTGCAGACAAAAATAGTGAG
TCAGCCATTCACCATAGTGGAAGAGGTTCTAACTATGTTCCTTTTGTGCCATTACCAAAA
GGCATGTTTCAGAAAAATAATCCAACTTCAGTGATGGATGAGAAAGTAAAGGAAGAAGTT
GGTGTCTCTCACACTCCTGAGGTTAGTCACCAAACATGTTCAGCAAGTCTTGGAAATGAC
TTTGGGAAGTCCATGGAGAAGTTGCAGTCAAATGACCCACTCAGTGAGGATAAAGAGAGA
GAACAAGCTGAGAAGTCAGAAAGTTGGTTCAAGAAAATCGCGGAGCTGCATGATGTCAAA
GACTTACCAAGTTCCATCTCCGATGATGACTTCCCAGAGATTATGCCAATGCGTAAAGGA
GAAAATAGATTTGTAGTTAGCAAGAAGAAAGACCGGTCTTTGACTTCTCCAATGTACAAA
AGACAAGTGGCCATGGAGCAAGCAAACAACAGTAGCTTTGTCCCATTTGTTCCCTTCCCT
CCAGGCTACTTTGCGAAAATGGACACACAACAGGAACATATCACAGATTCGTCCTCTCTG
TCTAGGGTTGGAACTTCATCTACATTCAGCAACTCAGATCACAAGGGATCACCCATGAAT
CCTCTTTCCAAAACCTATTGTGAGAAGGAAGATGTAGAGAAGACACATCAACAGTCAGAT
GATCCTGGGTTTTTGTTCAGAGATACTATCACTGCACAGACTCCTGTTGATCAATTTACG
AATTCAAGGTTTGCAAGTCCAAATTTCTCCAGGGATGAGGGGGTCCCTTGTGTTGGAAAT
TCAGTTGAAGCCTCTCTTGCTTTAGATGCTTGCAACACTGATAGTAAAGACAGAAGAAAC
TCCGTGAATGAGGATGTATCCCCAGCCGAGACTTTGGGAGTAGGTTCAACCAAGCTGCCT
AGAAACCAGAACGTCAGAAATGGATGGACAGGAAAGAGTTTGGAGGGGTCTGCTGTGAAG
GAAACAGATCCGTTAGACATGTCTGAAGAAGCCAAAGCTGAGAGGTGGTTCCAGCGTGTT
GCTCAGATAAAAGACATATCTGAATTGAGTCAAATCCCAGATGAAGACTTCCCATCTATT
ATGCCAATGCGCAAGGGAGTTAACAGATTTGTGGTGAGTAAGCGGAAAACTCCTCTTGAG
AGAAGGTTGACATCTACTCAGTACCGGAGAAATCTTCCCGTTGTGACTTCTGATCCCATG
AAAAGAGAAAGGGACAATAGTGATAAATGA

Peptide Sequence

PEP ID

PGSC0003DMP400019317
PEP Infomation

pacid=37438033 transcript=PGSC0003DMT400028376 locus=PGSC0003DMG400010935 ID=PGSC0003DMT400028376.v4.03 annot-version=v4.03
Sequence

MASRFISLLATPFPTFLNHLRRPSFLHLRRLACGFRRFTVYSHSHISPLSPSQQQFHAQP
INNNTPLDSSSSFTSHPWPEWRSLITLLTGNDQLPPAVEDSFVAYEDLSQDFLRAATLCL
DFAQERPNFIGLLSRRDIEAVVSNGTPFLFKGALETARRMRAFLGIDGSTVLDHDNANTV
DLMKYILSYASKPTVSSEKNSLYSRELIESSCRNLLRELVEVSCGAPAVNLPPAEQYDFS
GRYGQTSRPIRQNIVMKRGDWICQKCNFMNFARNNKCLECEEPRPRRQLTGREWECPQCY
FFNYGRNVVCLRCDFGRPAGASPRTTHSSAEDGYNGNSAYPNGIDLKLAENEEKAQRWFS
KISQMNNASDMDSAAADEDFPEIMPPRKGENKFVVSTRKTPLERRLANTRYERNFGYNGI
PEGNTLTGGAHSILDTSMKQNIDQMSGKSHKGIAADKNSESAIHHSGRGSNYVPFVPLPK
GMFQKNNPTSVMDEKVKEEVGVSHTPEVSHQTCSASLGNDFGKSMEKLQSNDPLSEDKER
EQAEKSESWFKKIAELHDVKDLPSSISDDDFPEIMPMRKGENRFVVSKKKDRSLTSPMYK
RQVAMEQANNSSFVPFVPFPPGYFAKMDTQQEHITDSSSLSRVGTSSTFSNSDHKGSPMN
PLSKTYCEKEDVEKTHQQSDDPGFLFRDTITAQTPVDQFTNSRFASPNFSRDEGVPCVGN
SVEASLALDACNTDSKDRRNSVNEDVSPAETLGVGSTKLPRNQNVRNGWTGKSLEGSAVK
ETDPLDMSEEAKAERWFQRVAQIKDISELSQIPDEDFPSIMPMRKGVNRFVVSKRKTPLE
RRLTSTQYRRNLPVVTSDPMKRERDNSDK*

Transcript Sequence

Transcript ID

PGSC0003DMT400028376
Transcript Infomation

pacid=37438033 locus=PGSC0003DMG400010935 ID=PGSC0003DMT400028376.v4.03 annot-version=v4.03
Sequence

ATGGCTTCGAGGTTCATCTCCCTCCTCGCCACTCCATTTCCCACCTTCCTCAATCACCTA
CGACGCCCCTCTTTCCTCCACCTTCGTCGTTTGGCATGCGGTTTTCGCCGCTTCACAGTC
TACAGTCACTCCCATATATCCCCTCTTTCACCCTCTCAACAACAATTCCATGCCCAGCCC
ATCAATAATAACACCCCACTCGACTCTTCTTCTTCTTTCACCTCCCACCCTTGGCCTGAA
TGGCGTAGCTTAATTACTCTTCTTACTGGCAATGACCAGCTACCTCCTGCAGTGGAGGAC
TCCTTCGTCGCATACGAGGACTTGTCCCAAGACTTCCTTCGTGCTGCTACCCTCTGCTTA
GATTTTGCACAGGAGCGCCCAAATTTCATAGGGTTGCTTTCAAGGAGGGATATTGAGGCC
GTTGTATCAAATGGGACACCATTTTTGTTCAAAGGTGCTCTGGAGACGGCAAGAAGAATG
AGGGCATTCTTGGGTATTGACGGGAGCACTGTGCTGGATCATGACAACGCTAACACAGTT
GATCTCATGAAATACATATTAAGTTACGCGAGTAAACCCACTGTTTCTTCAGAAAAAAAC
TCCCTCTATAGCAGGGAACTTATAGAATCATCTTGCCGGAATCTTTTGCGTGAGTTGGTT
GAAGTGAGCTGCGGAGCTCCAGCAGTGAACCTGCCTCCTGCAGAGCAATATGATTTTTCA
GGTAGATATGGACAAACATCAAGGCCTATTAGACAAAATATTGTAATGAAGAGAGGCGAC
TGGATATGCCAAAAGTGCAATTTCATGAACTTTGCAAGAAACAACAAATGCCTTGAATGT
GAGGAACCTAGACCAAGGAGACAGCTGACAGGCAGGGAGTGGGAATGCCCTCAATGTTAT
TTCTTCAATTATGGGAGAAATGTTGTCTGCCTGAGATGCGACTTCGGACGACCAGCTGGG
GCTTCACCTAGAACTACCCACTCCAGTGCAGAGGATGGGTACAATGGGAACTCTGCGTAT
CCAAATGGAATTGATCTTAAGTTGGCTGAGAATGAGGAGAAGGCACAGCGGTGGTTTTCT
AAGATTTCTCAGATGAACAATGCCTCTGATATGGATAGTGCAGCAGCTGACGAAGACTTT
CCTGAAATAATGCCGCCAAGGAAAGGAGAAAATAAGTTTGTTGTGAGCACAAGGAAAACA
CCCTTGGAAAGGAGGTTGGCCAACACTCGATACGAAAGAAACTTTGGTTACAATGGTATC
CCAGAAGGTAACACTTTGACTGGTGGTGCACATAGTATCCTTGACACATCAATGAAGCAG
AATATTGATCAAATGTCTGGAAAAAGTCATAAGGGCATTGCTGCAGACAAAAATAGTGAG
TCAGCCATTCACCATAGTGGAAGAGGTTCTAACTATGTTCCTTTTGTGCCATTACCAAAA
GGCATGTTTCAGAAAAATAATCCAACTTCAGTGATGGATGAGAAAGTAAAGGAAGAAGTT
GGTGTCTCTCACACTCCTGAGGTTAGTCACCAAACATGTTCAGCAAGTCTTGGAAATGAC
TTTGGGAAGTCCATGGAGAAGTTGCAGTCAAATGACCCACTCAGTGAGGATAAAGAGAGA
GAACAAGCTGAGAAGTCAGAAAGTTGGTTCAAGAAAATCGCGGAGCTGCATGATGTCAAA
GACTTACCAAGTTCCATCTCCGATGATGACTTCCCAGAGATTATGCCAATGCGTAAAGGA
GAAAATAGATTTGTAGTTAGCAAGAAGAAAGACCGGTCTTTGACTTCTCCAATGTACAAA
AGACAAGTGGCCATGGAGCAAGCAAACAACAGTAGCTTTGTCCCATTTGTTCCCTTCCCT
CCAGGCTACTTTGCGAAAATGGACACACAACAGGAACATATCACAGATTCGTCCTCTCTG
TCTAGGGTTGGAACTTCATCTACATTCAGCAACTCAGATCACAAGGGATCACCCATGAAT
CCTCTTTCCAAAACCTATTGTGAGAAGGAAGATGTAGAGAAGACACATCAACAGTCAGAT
GATCCTGGGTTTTTGTTCAGAGATACTATCACTGCACAGACTCCTGTTGATCAATTTACG
AATTCAAGGTTTGCAAGTCCAAATTTCTCCAGGGATGAGGGGGTCCCTTGTGTTGGAAAT
TCAGTTGAAGCCTCTCTTGCTTTAGATGCTTGCAACACTGATAGTAAAGACAGAAGAAAC
TCCGTGAATGAGGATGTATCCCCAGCCGAGACTTTGGGAGTAGGTTCAACCAAGCTGCCT
AGAAACCAGAACGTCAGAAATGGATGGACAGGAAAGAGTTTGGAGGGGTCTGCTGTGAAG
GAAACAGATCCGTTAGACATGTCTGAAGAAGCCAAAGCTGAGAGGTGGTTCCAGCGTGTT
GCTCAGATAAAAGACATATCTGAATTGAGTCAAATCCCAGATGAAGACTTCCCATCTATT
ATGCCAATGCGCAAGGGAGTTAACAGATTTGTGGTGAGTAAGCGGAAAACTCCTCTTGAG
AGAAGGTTGACATCTACTCAGTACCGGAGAAATCTTCCCGTTGTGACTTCTGATCCCATG
AAAAGAGAAAGGGACAATAGTGATAAATGA