Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400028308
CDS Infomation

pacid=37440601 polypeptide=PGSC0003DMP400019275 locus=PGSC0003DMG400010913 ID=PGSC0003DMT400028308.v4.03 annot-version=v4.03
Sequence

ATGGCGATTGAAAACAGCAACAATGTCAAGAGGCCTAAGACCAAGATTGTATGCACTTTA
GGCCCAGCATCTCGCTCAGTTCCCATGGTCGAGAAGCTTCTCCGGGCTGGCATGAATGTT
GCCAGATTCAACTTTTCTCATGGATCTCATGACTATCATCAGGAGACTATTGATAATCTC
CGACAGGCTATGGAGAATACTGGTATTCTCTGTGCTGTTATGCTTGATACCAAGGGTCCT
GAAATTCGAACAGGGTTTTTAAAAGATGGTAAGCCTGTTCAACTTAAACAGGGTCAGGAG
ATCACAGTCTCAACTGATTACAGCATTAAAGGTGATGAGAGTACGATATGCATGAGCTAC
AAAAAGTTAGCAGAGGATGTAAAGCCACAAAGTGTGATCCTCTGTGCAGATGGCACAATC
ACCTTCACCGTTTTGTCTTGTGACAAAGAGAAAGGTTTGGTACGATGCCGCTGTGAGAAC
ACTGCTGTTCTTGGTGAAAGAAAGAATGTCAATCTCCCTGGAGTAATTGTGGATCTGCCA
ACACTAACAGATAAAGACAAGGATGACATCTTAAACTGGGGAGTTCCAAATCATATCGAC
ATGATTGCGTTATCTTTTGTTCGTAAGGGTTCAGATCTTGTGGGGGTTCGGAAGCTGCTA
GGTGAACATGCAAAGAACATCCTTCTAATGTCTAAGGTTGAAAACCAGGAAGGTGTAGCA
AATTTTGATGACATTCTTGCCAACTCTGATGCATTTATGGTAGCCAGAGGTGACCTGGGA
ATGGAAATTCCAATTGAAAAGATCTTTTTGGCTCAAAAGGTAATGATTTACAAGTGCAAC
ATCCAAGGGAAACCTGTTGTGACAGCAACACAAATGTTGGAGTCCATGATCAAATCTCCA
AGACCAACTCGCGCAGAAGCAACAGATGTTGCCAATGCTGTCCTTGATGGCACAGACTGT
GTCATGCTTAGTGGTGAAACTGCTGCTGGAGCTTATCCTGATCTTGCAGTGGGAACCATG
GCCAGAATTTGTATTGAAGCAGAGAGCACAATTGATTATCCAGATGTGTTTAAAAGAATC
ATGGCAAATGCACCAGTTCCCATGAGCCCTTTGGAGAGCCTTGCGTCTTCTGCTGTTCGT
ACCGCTAACTCTGCAAAAGCTGCTCTAATTCTTGTGTTAACCAGGGGAGGAAGTACGGCA
AAATTGGTGGCCAAGTACAGGCCTGGAATGCCTATATTGTCTGTGGTTGTCCCTGAGATC
AAGACTGATTCTTTTGATTGGACTTGCAGTGATGAGTCTCCAGCAAGGCACAGCCTTATC
TTCAGGGGATTGGTTCCAGTTCTGCATGCAGGGTCAGCTAGGGCGTCCCATGAAGAGTCT
ACAGAAGAAGCACTGTATTTTGCTCTTCAACATGCCAAAACAAAAGGATTATGCAAGGAA
GGAGATTCCGTTGTAGCCCTTCACCGTGTTGGAACTGCTTCTGTGATCAAGATTGTTACA
GTCAAGTAG

Peptide Sequence

PEP ID

PGSC0003DMP400019275
PEP Infomation

pacid=37440601 transcript=PGSC0003DMT400028308 locus=PGSC0003DMG400010913 ID=PGSC0003DMT400028308.v4.03 annot-version=v4.03
Sequence

MAIENSNNVKRPKTKIVCTLGPASRSVPMVEKLLRAGMNVARFNFSHGSHDYHQETIDNL
RQAMENTGILCAVMLDTKGPEIRTGFLKDGKPVQLKQGQEITVSTDYSIKGDESTICMSY
KKLAEDVKPQSVILCADGTITFTVLSCDKEKGLVRCRCENTAVLGERKNVNLPGVIVDLP
TLTDKDKDDILNWGVPNHIDMIALSFVRKGSDLVGVRKLLGEHAKNILLMSKVENQEGVA
NFDDILANSDAFMVARGDLGMEIPIEKIFLAQKVMIYKCNIQGKPVVTATQMLESMIKSP
RPTRAEATDVANAVLDGTDCVMLSGETAAGAYPDLAVGTMARICIEAESTIDYPDVFKRI
MANAPVPMSPLESLASSAVRTANSAKAALILVLTRGGSTAKLVAKYRPGMPILSVVVPEI
KTDSFDWTCSDESPARHSLIFRGLVPVLHAGSARASHEESTEEALYFALQHAKTKGLCKE
GDSVVALHRVGTASVIKIVTVK*

Transcript Sequence

Transcript ID

PGSC0003DMT400028308
Transcript Infomation

pacid=37440601 locus=PGSC0003DMG400010913 ID=PGSC0003DMT400028308.v4.03 annot-version=v4.03
Sequence

ATGGCGATTGAAAACAGCAACAATGTCAAGAGGCCTAAGACCAAGATTGTATGCACTTTA
GGCCCAGCATCTCGCTCAGTTCCCATGGTCGAGAAGCTTCTCCGGGCTGGCATGAATGTT
GCCAGATTCAACTTTTCTCATGGATCTCATGACTATCATCAGGAGACTATTGATAATCTC
CGACAGGCTATGGAGAATACTGGTATTCTCTGTGCTGTTATGCTTGATACCAAGGGTCCT
GAAATTCGAACAGGGTTTTTAAAAGATGGTAAGCCTGTTCAACTTAAACAGGGTCAGGAG
ATCACAGTCTCAACTGATTACAGCATTAAAGGTGATGAGAGTACGATATGCATGAGCTAC
AAAAAGTTAGCAGAGGATGTAAAGCCACAAAGTGTGATCCTCTGTGCAGATGGCACAATC
ACCTTCACCGTTTTGTCTTGTGACAAAGAGAAAGGTTTGGTACGATGCCGCTGTGAGAAC
ACTGCTGTTCTTGGTGAAAGAAAGAATGTCAATCTCCCTGGAGTAATTGTGGATCTGCCA
ACACTAACAGATAAAGACAAGGATGACATCTTAAACTGGGGAGTTCCAAATCATATCGAC
ATGATTGCGTTATCTTTTGTTCGTAAGGGTTCAGATCTTGTGGGGGTTCGGAAGCTGCTA
GGTGAACATGCAAAGAACATCCTTCTAATGTCTAAGGTTGAAAACCAGGAAGGTGTAGCA
AATTTTGATGACATTCTTGCCAACTCTGATGCATTTATGGTAGCCAGAGGTGACCTGGGA
ATGGAAATTCCAATTGAAAAGATCTTTTTGGCTCAAAAGGTAATGATTTACAAGTGCAAC
ATCCAAGGGAAACCTGTTGTGACAGCAACACAAATGTTGGAGTCCATGATCAAATCTCCA
AGACCAACTCGCGCAGAAGCAACAGATGTTGCCAATGCTGTCCTTGATGGCACAGACTGT
GTCATGCTTAGTGGTGAAACTGCTGCTGGAGCTTATCCTGATCTTGCAGTGGGAACCATG
GCCAGAATTTGTATTGAAGCAGAGAGCACAATTGATTATCCAGATGTGTTTAAAAGAATC
ATGGCAAATGCACCAGTTCCCATGAGCCCTTTGGAGAGCCTTGCGTCTTCTGCTGTTCGT
ACCGCTAACTCTGCAAAAGCTGCTCTAATTCTTGTGTTAACCAGGGGAGGAAGTACGGCA
AAATTGGTGGCCAAGTACAGGCCTGGAATGCCTATATTGTCTGTGGTTGTCCCTGAGATC
AAGACTGATTCTTTTGATTGGACTTGCAGTGATGAGTCTCCAGCAAGGCACAGCCTTATC
TTCAGGGGATTGGTTCCAGTTCTGCATGCAGGGTCAGCTAGGGCGTCCCATGAAGAGTCT
ACAGAAGAAGCACTGTATTTTGCTCTTCAACATGCCAAAACAAAAGGATTATGCAAGGAA
GGAGATTCCGTTGTAGCCCTTCACCGTGTTGGAACTGCTTCTGTGATCAAGATTGTTACA
GTCAAGTAG