Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400028272
CDS Infomation

pacid=37449943 polypeptide=PGSC0003DMP400019255 locus=PGSC0003DMG401010896 ID=PGSC0003DMT400028272.v4.03 annot-version=v4.03
Sequence

ATGGGGCAACAACAATCAAAAAATGAGTTACTGTATCAACAAGTCATTGAAGGAGATGTT
GAATCTATCAAAGCTCTTCACAATGATGGTGCCAGTCTTGAGTGGATCGACAAAGATGGA
AAGACACCATTGATTGTAGCGTGCATGAAGCCGAATGGCTTGAATGTTGCAAAAACTTTG
CTTGAGCTCGGTGCTAATGTCAATGCTTACCGGCCAGGATATCATGCTGGGACTGCGCTA
CATCATGCAGCTAAGAGAGGTCTGGATGATACTGTGCAATTGCTTCTTTCCTATGGAGCA
AATCCATTGATCAAGAACGATGCTTGCCAAACTCCACTTGAAGTAGCTCGAGCAAAGGGT
TTTAGCGATGTCGTCCGTACTATTGAGAGACAAATCTGCATTTTCTCGGGCTGGATGAGG
GAGTTCTATGGTCCAGGGTTTCTTGAAGCTTTAGCTCCTCAATTATTATCTAGGAAGATT
TGGGTTGTAGTCATACCTTGTGGTATAGCTGATCCTATGAGGCCTCTTAAATTACAACTG
GCGATTTACTCATCGCTACAGGACGCCCAGCCTCGTAATGTTATCGTTTTATGGAGAGCT
ATTGTTGAAGAGATAAGGCAGCAACGATCAGATCCTGTGCTGACAATTTTTGACAAGACC
AGTAACACTCGATATAAATTTACATCAGTCAGCGATTCTGAGCAACAACAGCTTCAATTG
TTGCACAGAGCATGTATTGCTTCCATTGAGGTCCTGCCTTCCCGCTTACCACAAAATACC
CAAACTGCAGCTACACAATCTGAAACTGCTGCACAAGCAATGGAATTAGCAATTGGAATC
AACTCTTCCATTGATTCTGCTAAAGAAAATAAGATTTTACATCATCATGGACAAAGTTCC
GGAGTAAAAAATGAAAATGACTGGTGTAATAACACCGACGACTCTGCTCACAGTGGATGG
GGTTCACTTGTCAGATCCGAGCCTAGATCAGAAATTACTAACAATGATTGGACGGATGAC
CGAACTAAGGTCCAAGAAAATGGATGGGGAAATACCGCAGATGTATCCAGTCAACAACCA
CAACAATCACTTCCTAAATCCACACCCTCTGAACTAAGCTGCAGCGGATGGATCGATGAG
CCTGCTGTAGAAGAGTACAATGGATGGGGCGTGCCCGAGCCTCGGCAGAGACACAGAGAT
GCCTCAGCTGAAGTTCATTATCAAGGATGGGAAAACACTTCAAAGGACAAAACAGCATCG
TCAGATGTAAGTAGCTGGGAAGCAATGGACAAGACAGACAATGCACCTGAATTTAGGCCT
ATTGTCTATCCAAGTGAAAACGCTGAAACTCAAGAGGGTAACAATCCTGCTTTTGATTTT
GCGGTACCTTCAGCTCCACCTGTTCCAGAAGAAGTTGAAGACATTCATTATCCGGTCATA
GATCTTAGCCCATTGCACATGTCGAATCCTCCTGTGGAGCAAAAAACAGCTTCTGTTACG
ACTCAAAAGGAAAAAGAACATGAGCCTGCACTGTGTATAATATGTTGGGAAGCTTCAGTT
GAAGGAGCATGTGTACCTTGTGGTCACATGGTTGGCTGCATGCAGTGTTTGAACCAGATC
AAATCAAAGAAAGGGGAGTGCCCTGTTTGTCGAGTAAAAATCGACCAGGTTATAAAGCTC
TACTCTGTTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400019255
PEP Infomation

pacid=37449943 transcript=PGSC0003DMT400028272 locus=PGSC0003DMG401010896 ID=PGSC0003DMT400028272.v4.03 annot-version=v4.03
Sequence

MGQQQSKNELLYQQVIEGDVESIKALHNDGASLEWIDKDGKTPLIVACMKPNGLNVAKTL
LELGANVNAYRPGYHAGTALHHAAKRGLDDTVQLLLSYGANPLIKNDACQTPLEVARAKG
FSDVVRTIERQICIFSGWMREFYGPGFLEALAPQLLSRKIWVVVIPCGIADPMRPLKLQL
AIYSSLQDAQPRNVIVLWRAIVEEIRQQRSDPVLTIFDKTSNTRYKFTSVSDSEQQQLQL
LHRACIASIEVLPSRLPQNTQTAATQSETAAQAMELAIGINSSIDSAKENKILHHHGQSS
GVKNENDWCNNTDDSAHSGWGSLVRSEPRSEITNNDWTDDRTKVQENGWGNTADVSSQQP
QQSLPKSTPSELSCSGWIDEPAVEEYNGWGVPEPRQRHRDASAEVHYQGWENTSKDKTAS
SDVSSWEAMDKTDNAPEFRPIVYPSENAETQEGNNPAFDFAVPSAPPVPEEVEDIHYPVI
DLSPLHMSNPPVEQKTASVTTQKEKEHEPALCIICWEASVEGACVPCGHMVGCMQCLNQI
KSKKGECPVCRVKIDQVIKLYSV*

Transcript Sequence

Transcript ID

PGSC0003DMT400028272
Transcript Infomation

pacid=37449943 locus=PGSC0003DMG401010896 ID=PGSC0003DMT400028272.v4.03 annot-version=v4.03
Sequence

ATGGGGCAACAACAATCAAAAAATGAGTTACTGTATCAACAAGTCATTGAAGGAGATGTT
GAATCTATCAAAGCTCTTCACAATGATGGTGCCAGTCTTGAGTGGATCGACAAAGATGGA
AAGACACCATTGATTGTAGCGTGCATGAAGCCGAATGGCTTGAATGTTGCAAAAACTTTG
CTTGAGCTCGGTGCTAATGTCAATGCTTACCGGCCAGGATATCATGCTGGGACTGCGCTA
CATCATGCAGCTAAGAGAGGTCTGGATGATACTGTGCAATTGCTTCTTTCCTATGGAGCA
AATCCATTGATCAAGAACGATGCTTGCCAAACTCCACTTGAAGTAGCTCGAGCAAAGGGT
TTTAGCGATGTCGTCCGTACTATTGAGAGACAAATCTGCATTTTCTCGGGCTGGATGAGG
GAGTTCTATGGTCCAGGGTTTCTTGAAGCTTTAGCTCCTCAATTATTATCTAGGAAGATT
TGGGTTGTAGTCATACCTTGTGGTATAGCTGATCCTATGAGGCCTCTTAAATTACAACTG
GCGATTTACTCATCGCTACAGGACGCCCAGCCTCGTAATGTTATCGTTTTATGGAGAGCT
ATTGTTGAAGAGATAAGGCAGCAACGATCAGATCCTGTGCTGACAATTTTTGACAAGACC
AGTAACACTCGATATAAATTTACATCAGTCAGCGATTCTGAGCAACAACAGCTTCAATTG
TTGCACAGAGCATGTATTGCTTCCATTGAGGTCCTGCCTTCCCGCTTACCACAAAATACC
CAAACTGCAGCTACACAATCTGAAACTGCTGCACAAGCAATGGAATTAGCAATTGGAATC
AACTCTTCCATTGATTCTGCTAAAGAAAATAAGATTTTACATCATCATGGACAAAGTTCC
GGAGTAAAAAATGAAAATGACTGGTGTAATAACACCGACGACTCTGCTCACAGTGGATGG
GGTTCACTTGTCAGATCCGAGCCTAGATCAGAAATTACTAACAATGATTGGACGGATGAC
CGAACTAAGGTCCAAGAAAATGGATGGGGAAATACCGCAGATGTATCCAGTCAACAACCA
CAACAATCACTTCCTAAATCCACACCCTCTGAACTAAGCTGCAGCGGATGGATCGATGAG
CCTGCTGTAGAAGAGTACAATGGATGGGGCGTGCCCGAGCCTCGGCAGAGACACAGAGAT
GCCTCAGCTGAAGTTCATTATCAAGGATGGGAAAACACTTCAAAGGACAAAACAGCATCG
TCAGATGTAAGTAGCTGGGAAGCAATGGACAAGACAGACAATGCACCTGAATTTAGGCCT
ATTGTCTATCCAAGTGAAAACGCTGAAACTCAAGAGGGTAACAATCCTGCTTTTGATTTT
GCGGTACCTTCAGCTCCACCTGTTCCAGAAGAAGTTGAAGACATTCATTATCCGGTCATA
GATCTTAGCCCATTGCACATGTCGAATCCTCCTGTGGAGCAAAAAACAGCTTCTGTTACG
ACTCAAAAGGAAAAAGAACATGAGCCTGCACTGTGTATAATATGTTGGGAAGCTTCAGTT
GAAGGAGCATGTGTACCTTGTGGTCACATGGTTGGCTGCATGCAGTGTTTGAACCAGATC
AAATCAAAGAAAGGGGAGTGCCCTGTTTGTCGAGTAAAAATCGACCAGGTTATAAAGCTC
TACTCTGTTTGA