Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400028257
CDS Infomation

pacid=37451226 polypeptide=PGSC0003DMP400019244 locus=PGSC0003DMG400010892 ID=PGSC0003DMT400028257.v4.03 annot-version=v4.03
Sequence

ATGGAGTCTACAGATTCTTCTTCTTCTTCACTGTTGAATACATTCAAATCGAAGAAGAAA
CTTCAGATTGGATCCGACCCGGATACATCCGGAGCTCCATCTCTAGATCCATGGAGCTCC
AAAACCCCTGAGAAGACAATCGTTCCTCCTCGCCGGACTCGGAATCGGAATGCTGCGTTT
TCATTGAAAGATATCCGACAGGCTGCACAGAAGCTCCGGAAACCTGACCCGACCCGCCCG
AATTCCCAGACTGATACATCATTGAGCTCTGTGAAAACACAGATGGAAGAAGCTTCAGCA
GCTAAACCGAAGAAGCCTGTAAATCCAGTAAAGCTACCAGAAAAATACAAATTATTGGAG
GAATTCTTTGGTGGCTTGGTGAGTTCGATTCGATTGCTGCAGTTGAAGGGTTCTTCGGCA
ACATTTACAAATATTAGTGCAAAGGTGGAGTGTCTAACAGATAGGAGGTTTACTTATAAT
CACTTAGCACAACTGAAGTTTCTTTTACCTGAGGCTATCGAGATAAAGAAGATGCTTGTG
TTCGATGAAAGGACAACCTGTATGAAGCCTGATCTTCATATTGCGTTGAATGCTAATGGA
GTTGCAGGAGATAAGAAGCTGAAATCCTCTCGTGGCACCGAACAACTGAGGACAGTCTTC
AGCAGTCGGATTTTGGATTTCTTTAAATCCCACCCTGAGGGAGATGACATTCCTGAGGAA
GAACTACCAGGAGCGTTTGGTGCGTCTAAGCAAGAGCACTTGACGAACTCATCAAGTCCT
GTAGGTGCACAGTTGAAGGAGGAGACACCAATTGGCTCAGTGCAGAAGCCGCCAGTAGCT
GTATCTCATCTGTCTCAATCTTTCAGGAGATCCTTTTCTCATCGAGCGTCTATTGGCATA
GCAGAGAACGTAAAGCAACAAACAACAGTTTCTCAAACTTCAATTCCTCGAGTGTCAGAA
CCCCAGATTACCAATTGTCCCACCAACACCTCTAAATTGCTTTTGACACAAACTAGGACC
ACAAGATTCTCAACACAAGGGGTTCATTCTGCTACTTTACCACCATCTCCTCTACCAGCA
ACTCCGTCAAAAAACACGAAAAGTGAAGATGGTTCGTGTTTGTTAAGTGCTGAAAGTACT
CCAGAAAAACTTGCATCTACTCCAGCAAAATTGATGAGTTCTACACCTTTGCTCCAACCT
TCCAAGAGATGCTATATGACTCCAGATGGTGAGTCAACTGAATCACCAAGAAAGCTAGTG
AGGCGCCCCCCTCCTAGTAGGTCATTGACCTTTAATACTCCTGTAAAAAGTTCAAAAGTT
ACAGAAGAAACCAGCCGGAGGAGAGAATCATCAACAGATGATGAAATCTTCGACATTCTT
CCAGAGAATCTTCTGCAGTCGATAAGAGCAAAAGAGCAGGAGGCACTAGAGGAGCTAGAT
CCAGCCATATCCCAAGCAAAATGGCGCAAGAAAATGATTTCGGTCTTGCCTAAGTTTTTC
GACATGATTTACTTCCTATTTCACTCAATTAACCGATATGTGATTACTAAAGAAGAGCTT
ACACACAAAGTGATTTCGAGCCATCTAGCTATTGCTGATAAAAGAGAATTTGAAGAGCTA
CTACGGTTATTGCAAGAAATAGCTCCTGAATGGATCCATGAAAAGCTGTCATCTAGTGGG
GATCTTCTCTTGTGTGTTAGCAAGGTATCAAATGCTGATTCAATACGCACAAGGATTGCC
GAAGCAAAGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400019244
PEP Infomation

pacid=37451226 transcript=PGSC0003DMT400028257 locus=PGSC0003DMG400010892 ID=PGSC0003DMT400028257.v4.03 annot-version=v4.03
Sequence

MESTDSSSSSLLNTFKSKKKLQIGSDPDTSGAPSLDPWSSKTPEKTIVPPRRTRNRNAAF
SLKDIRQAAQKLRKPDPTRPNSQTDTSLSSVKTQMEEASAAKPKKPVNPVKLPEKYKLLE
EFFGGLVSSIRLLQLKGSSATFTNISAKVECLTDRRFTYNHLAQLKFLLPEAIEIKKMLV
FDERTTCMKPDLHIALNANGVAGDKKLKSSRGTEQLRTVFSSRILDFFKSHPEGDDIPEE
ELPGAFGASKQEHLTNSSSPVGAQLKEETPIGSVQKPPVAVSHLSQSFRRSFSHRASIGI
AENVKQQTTVSQTSIPRVSEPQITNCPTNTSKLLLTQTRTTRFSTQGVHSATLPPSPLPA
TPSKNTKSEDGSCLLSAESTPEKLASTPAKLMSSTPLLQPSKRCYMTPDGESTESPRKLV
RRPPPSRSLTFNTPVKSSKVTEETSRRRESSTDDEIFDILPENLLQSIRAKEQEALEELD
PAISQAKWRKKMISVLPKFFDMIYFLFHSINRYVITKEELTHKVISSHLAIADKREFEEL
LRLLQEIAPEWIHEKLSSSGDLLLCVSKVSNADSIRTRIAEAK*

Transcript Sequence

Transcript ID

PGSC0003DMT400028257
Transcript Infomation

pacid=37451226 locus=PGSC0003DMG400010892 ID=PGSC0003DMT400028257.v4.03 annot-version=v4.03
Sequence

ATGGAGTCTACAGATTCTTCTTCTTCTTCACTGTTGAATACATTCAAATCGAAGAAGAAA
CTTCAGATTGGATCCGACCCGGATACATCCGGAGCTCCATCTCTAGATCCATGGAGCTCC
AAAACCCCTGAGAAGACAATCGTTCCTCCTCGCCGGACTCGGAATCGGAATGCTGCGTTT
TCATTGAAAGATATCCGACAGGCTGCACAGAAGCTCCGGAAACCTGACCCGACCCGCCCG
AATTCCCAGACTGATACATCATTGAGCTCTGTGAAAACACAGATGGAAGAAGCTTCAGCA
GCTAAACCGAAGAAGCCTGTAAATCCAGTAAAGCTACCAGAAAAATACAAATTATTGGAG
GAATTCTTTGGTGGCTTGGTGAGTTCGATTCGATTGCTGCAGTTGAAGGGTTCTTCGGCA
ACATTTACAAATATTAGTGCAAAGGTGGAGTGTCTAACAGATAGGAGGTTTACTTATAAT
CACTTAGCACAACTGAAGTTTCTTTTACCTGAGGCTATCGAGATAAAGAAGATGCTTGTG
TTCGATGAAAGGACAACCTGTATGAAGCCTGATCTTCATATTGCGTTGAATGCTAATGGA
GTTGCAGGAGATAAGAAGCTGAAATCCTCTCGTGGCACCGAACAACTGAGGACAGTCTTC
AGCAGTCGGATTTTGGATTTCTTTAAATCCCACCCTGAGGGAGATGACATTCCTGAGGAA
GAACTACCAGGAGCGTTTGGTGCGTCTAAGCAAGAGCACTTGACGAACTCATCAAGTCCT
GTAGGTGCACAGTTGAAGGAGGAGACACCAATTGGCTCAGTGCAGAAGCCGCCAGTAGCT
GTATCTCATCTGTCTCAATCTTTCAGGAGATCCTTTTCTCATCGAGCGTCTATTGGCATA
GCAGAGAACGTAAAGCAACAAACAACAGTTTCTCAAACTTCAATTCCTCGAGTGTCAGAA
CCCCAGATTACCAATTGTCCCACCAACACCTCTAAATTGCTTTTGACACAAACTAGGACC
ACAAGATTCTCAACACAAGGGGTTCATTCTGCTACTTTACCACCATCTCCTCTACCAGCA
ACTCCGTCAAAAAACACGAAAAGTGAAGATGGTTCGTGTTTGTTAAGTGCTGAAAGTACT
CCAGAAAAACTTGCATCTACTCCAGCAAAATTGATGAGTTCTACACCTTTGCTCCAACCT
TCCAAGAGATGCTATATGACTCCAGATGGTGAGTCAACTGAATCACCAAGAAAGCTAGTG
AGGCGCCCCCCTCCTAGTAGGTCATTGACCTTTAATACTCCTGTAAAAAGTTCAAAAGTT
ACAGAAGAAACCAGCCGGAGGAGAGAATCATCAACAGATGATGAAATCTTCGACATTCTT
CCAGAGAATCTTCTGCAGTCGATAAGAGCAAAAGAGCAGGAGGCACTAGAGGAGCTAGAT
CCAGCCATATCCCAAGCAAAATGGCGCAAGAAAATGATTTCGGTCTTGCCTAAGTTTTTC
GACATGATTTACTTCCTATTTCACTCAATTAACCGATATGTGATTACTAAAGAAGAGCTT
ACACACAAAGTGATTTCGAGCCATCTAGCTATTGCTGATAAAAGAGAATTTGAAGAGCTA
CTACGGTTATTGCAAGAAATAGCTCCTGAATGGATCCATGAAAAGCTGTCATCTAGTGGG
GATCTTCTCTTGTGTGTTAGCAAGGTATCAAATGCTGATTCAATACGCACAAGGATTGCC
GAAGCAAAGTAA