Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400028158
CDS Infomation

pacid=37470554 polypeptide=PGSC0003DMP400019188 locus=PGSC0003DMG400010859 ID=PGSC0003DMT400028158.v4.03 annot-version=v4.03
Sequence

ATGTTACTGGAAAAAATAGTGGAGGCTATCTCTGGGAGAAGTGAGGACAATGGAAAAAAG
GTGAAAGGAACAGTTGTGTTGATGAAGAAGAATGTACTGGACTTTAATGATGTCAATGCC
TCTCTTCTTGATGGAGTACTTGAGTTCCTTGGGAAAAGAGTCTCTTTGCAGTTGATCAGC
GTTGTTCATGCTGATCCTGGAAACAGTTTACAAGGGAAACGTAGCAATCCAGCTTACTTG
GAGAAGTGGCTCACTACAGGAACCTCATTAGTAGCAGGTGAATCAGCCTTTGACGTCACG
TTTGATTGGGACGAAGATATTGGCGTACCAGGGGCATTTATTATCAATAATTTCCACTTC
AATGAGTTTTATCTCAAGTCACTCACCCTTGAAGATGTTCCTAATCATGGCAACGTTCAT
TTTGTCTGCAATTCTTGGGTTTATCCTGCTAAAAAATACAAATCAGAACGCATTTTCTTT
GCTAATCAGGCATATCTTCCCGGTGAAACACCAGAACCATTGCGCAATTACAGAGAAAAA
GAATTAGTGAACTTGAGAGGAAATGGAAATGGAAAGCTTGAGGAATGGGACAGAGTTTAT
GACTACGCGTTATACAATGACTTGGGTGATCCAGAAAAAGGCAAACAGTATGCCAGGACT
ATCCTCGGAGGATCTGCTGAGTACCCGTACCCTCGGAGAGGAAGAACTGGCAGAAAGCCA
ACAAAAGCAGATCCTAAAAGTGAAAGTAGGATTCCACTACTTATGAGTTTAGACATCTAT
GTACCAAGAGACGAGCGTTTTGGACACATTAAGTTGTCGGACTTCCTGACGTATGCTTTG
AAATCCATTGTTCAGTTCCTTATCCCCGAGTTTCAAGCTCTCTTTGATAGCACACCTGAT
GAGTTTGACAGCTTTGAGGATGTACTGAAACTTTATGAAGGAGGAATCAAATTGCCCCAA
GGCCCTTTTCTTAAAGCCCTCACTGATAGTATTCCTCTAGAGATTCTAAAAGAAATTATC
CGAACCGATGGTGAAGGAAAATTCAAATTCCCAGCACCTCAAGTTATTCAAGAGGATAAA
AGTTCATGGAGGACTGATGAAGAATTTGCAAGAGAAATGCTTGCCGGAGTAAATCCTGTC
ATAATCAGCAGACTCCAAGAATTCCCTCCAAAAAGCCAGTTAGATTCTGAAGTATATGGC
AATCAAAACAGTACAATAACCAAAGAGCATATAGAGAATACACTTGATGGGCTAACGATC
GATGATGCAATCAAGACTAACAGGCTTTATATACTAAACCACCATGACATCCTTATGCCA
TATGTGAGGAGAATAAACACGACAAACACAAAACTCTACGCCTCAAGAACTTTGCTATTC
TTGCAAGACGATGGAACAATGAAGCCGGTAGCAATTGAACTAAGCTTGCCACATCCAGAT
GGCGATGAACTTGGTGCTGTTAGCAAAGTCTATACCCCAGCTGATCAAGGTGTTGAAGGT
TCAATATGGCAATTGGCTAAAGCTTATGTTGCAGTGAATGACTCGGGTGTCCATCAGCTA
ATTAGTCACTGGTTGAATACACACGCAGCCATTGAGCCTTTTGTGATTGCTACAAACAGG
CAACTAAGTGTGCTTCACCCAATTCATAAGCTTTTACATCCTCATTTTCGTGACACGATG
AACATAAATGCTTTGGCAAGACAGATCTTAATCAATGCTGGTGGAGTTCTTGAGATGACA
GTTTTTCCTGCCAAATATGCGATGGAAATGTCAGCTGTAGTTTACAAAAGTTGGGTTTTT
CCTGAACAAGCACTTCCAGCTGATCTTATAAAGAGGGGAGTGGCCGTAGAGGACTCTAGT
TCCCCACATGGTGTTCGCTTGCTAATTCAAGACTATCCATATGCTGTTGATGGCTTAGAA
ATATGGTCAGCAATCAAAAGTTGGGTAACCGAATATTGCAACTTCTATTATAAATCAGAT
GAATTAGTTTTGAAAGATAATGAACTCCAAGCGTGGTGGAAGGAACTTCGAGAAGAAGGA
CATGGTGACAAGAAAGATGAACCTTGGTGGCCTAAAATGCAAACTCGCCAAGAGCTAAAA
GATTCTTGCACTATTATTATTTGGATAGCATCAGCACTTCATGCAGCAGTCAATTTTGGG
CAATACCCTTATGCAGGTTACCTCCCAAATCGCCCAACGTTAAGTCGAAGATTCATGCCT
GAGCCAGGAACTCCTGAGTATGAAGAACTCAAGACAAATCCTGACAAGGCATACTTGAAA
ACAATCACTCCTCAACTGCAGACATTACTAGGAATTTCTCTCATAGAGATATTATCAAGG
CATGCATCAGATGAGATTTACCTTGGACAACGGGACTCATCCGAATGGACAAAGGATCAA
GAACCCATTGCTGCTTTTGAGAGATTTGGGAAGAAGTTAAGTGAGATCGAGGATCAAATT
ATACAGATGAATGGTGATAAGAAATGGAAAAATAGGTCAGGGCCTGTTAACGTTCCATAT
ACATTGCTCTTCCCTACAAGTGAACAAGGACTCACAGGCAAAGGAATACCTAATAGTGTG
TCAATATAG

Peptide Sequence

PEP ID

PGSC0003DMP400019188
PEP Infomation

pacid=37470554 transcript=PGSC0003DMT400028158 locus=PGSC0003DMG400010859 ID=PGSC0003DMT400028158.v4.03 annot-version=v4.03
Sequence

MLLEKIVEAISGRSEDNGKKVKGTVVLMKKNVLDFNDVNASLLDGVLEFLGKRVSLQLIS
VVHADPGNSLQGKRSNPAYLEKWLTTGTSLVAGESAFDVTFDWDEDIGVPGAFIINNFHF
NEFYLKSLTLEDVPNHGNVHFVCNSWVYPAKKYKSERIFFANQAYLPGETPEPLRNYREK
ELVNLRGNGNGKLEEWDRVYDYALYNDLGDPEKGKQYARTILGGSAEYPYPRRGRTGRKP
TKADPKSESRIPLLMSLDIYVPRDERFGHIKLSDFLTYALKSIVQFLIPEFQALFDSTPD
EFDSFEDVLKLYEGGIKLPQGPFLKALTDSIPLEILKEIIRTDGEGKFKFPAPQVIQEDK
SSWRTDEEFAREMLAGVNPVIISRLQEFPPKSQLDSEVYGNQNSTITKEHIENTLDGLTI
DDAIKTNRLYILNHHDILMPYVRRINTTNTKLYASRTLLFLQDDGTMKPVAIELSLPHPD
GDELGAVSKVYTPADQGVEGSIWQLAKAYVAVNDSGVHQLISHWLNTHAAIEPFVIATNR
QLSVLHPIHKLLHPHFRDTMNINALARQILINAGGVLEMTVFPAKYAMEMSAVVYKSWVF
PEQALPADLIKRGVAVEDSSSPHGVRLLIQDYPYAVDGLEIWSAIKSWVTEYCNFYYKSD
ELVLKDNELQAWWKELREEGHGDKKDEPWWPKMQTRQELKDSCTIIIWIASALHAAVNFG
QYPYAGYLPNRPTLSRRFMPEPGTPEYEELKTNPDKAYLKTITPQLQTLLGISLIEILSR
HASDEIYLGQRDSSEWTKDQEPIAAFERFGKKLSEIEDQIIQMNGDKKWKNRSGPVNVPY
TLLFPTSEQGLTGKGIPNSVSI*

Transcript Sequence

Transcript ID

PGSC0003DMT400028158
Transcript Infomation

pacid=37470554 locus=PGSC0003DMG400010859 ID=PGSC0003DMT400028158.v4.03 annot-version=v4.03
Sequence

ATGTTACTGGAAAAAATAGTGGAGGCTATCTCTGGGAGAAGTGAGGACAATGGAAAAAAG
GTGAAAGGAACAGTTGTGTTGATGAAGAAGAATGTACTGGACTTTAATGATGTCAATGCC
TCTCTTCTTGATGGAGTACTTGAGTTCCTTGGGAAAAGAGTCTCTTTGCAGTTGATCAGC
GTTGTTCATGCTGATCCTGGAAACAGTTTACAAGGGAAACGTAGCAATCCAGCTTACTTG
GAGAAGTGGCTCACTACAGGAACCTCATTAGTAGCAGGTGAATCAGCCTTTGACGTCACG
TTTGATTGGGACGAAGATATTGGCGTACCAGGGGCATTTATTATCAATAATTTCCACTTC
AATGAGTTTTATCTCAAGTCACTCACCCTTGAAGATGTTCCTAATCATGGCAACGTTCAT
TTTGTCTGCAATTCTTGGGTTTATCCTGCTAAAAAATACAAATCAGAACGCATTTTCTTT
GCTAATCAGGCATATCTTCCCGGTGAAACACCAGAACCATTGCGCAATTACAGAGAAAAA
GAATTAGTGAACTTGAGAGGAAATGGAAATGGAAAGCTTGAGGAATGGGACAGAGTTTAT
GACTACGCGTTATACAATGACTTGGGTGATCCAGAAAAAGGCAAACAGTATGCCAGGACT
ATCCTCGGAGGATCTGCTGAGTACCCGTACCCTCGGAGAGGAAGAACTGGCAGAAAGCCA
ACAAAAGCAGATCCTAAAAGTGAAAGTAGGATTCCACTACTTATGAGTTTAGACATCTAT
GTACCAAGAGACGAGCGTTTTGGACACATTAAGTTGTCGGACTTCCTGACGTATGCTTTG
AAATCCATTGTTCAGTTCCTTATCCCCGAGTTTCAAGCTCTCTTTGATAGCACACCTGAT
GAGTTTGACAGCTTTGAGGATGTACTGAAACTTTATGAAGGAGGAATCAAATTGCCCCAA
GGCCCTTTTCTTAAAGCCCTCACTGATAGTATTCCTCTAGAGATTCTAAAAGAAATTATC
CGAACCGATGGTGAAGGAAAATTCAAATTCCCAGCACCTCAAGTTATTCAAGAGGATAAA
AGTTCATGGAGGACTGATGAAGAATTTGCAAGAGAAATGCTTGCCGGAGTAAATCCTGTC
ATAATCAGCAGACTCCAAGAATTCCCTCCAAAAAGCCAGTTAGATTCTGAAGTATATGGC
AATCAAAACAGTACAATAACCAAAGAGCATATAGAGAATACACTTGATGGGCTAACGATC
GATGATGCAATCAAGACTAACAGGCTTTATATACTAAACCACCATGACATCCTTATGCCA
TATGTGAGGAGAATAAACACGACAAACACAAAACTCTACGCCTCAAGAACTTTGCTATTC
TTGCAAGACGATGGAACAATGAAGCCGGTAGCAATTGAACTAAGCTTGCCACATCCAGAT
GGCGATGAACTTGGTGCTGTTAGCAAAGTCTATACCCCAGCTGATCAAGGTGTTGAAGGT
TCAATATGGCAATTGGCTAAAGCTTATGTTGCAGTGAATGACTCGGGTGTCCATCAGCTA
ATTAGTCACTGGTTGAATACACACGCAGCCATTGAGCCTTTTGTGATTGCTACAAACAGG
CAACTAAGTGTGCTTCACCCAATTCATAAGCTTTTACATCCTCATTTTCGTGACACGATG
AACATAAATGCTTTGGCAAGACAGATCTTAATCAATGCTGGTGGAGTTCTTGAGATGACA
GTTTTTCCTGCCAAATATGCGATGGAAATGTCAGCTGTAGTTTACAAAAGTTGGGTTTTT
CCTGAACAAGCACTTCCAGCTGATCTTATAAAGAGGGGAGTGGCCGTAGAGGACTCTAGT
TCCCCACATGGTGTTCGCTTGCTAATTCAAGACTATCCATATGCTGTTGATGGCTTAGAA
ATATGGTCAGCAATCAAAAGTTGGGTAACCGAATATTGCAACTTCTATTATAAATCAGAT
GAATTAGTTTTGAAAGATAATGAACTCCAAGCGTGGTGGAAGGAACTTCGAGAAGAAGGA
CATGGTGACAAGAAAGATGAACCTTGGTGGCCTAAAATGCAAACTCGCCAAGAGCTAAAA
GATTCTTGCACTATTATTATTTGGATAGCATCAGCACTTCATGCAGCAGTCAATTTTGGG
CAATACCCTTATGCAGGTTACCTCCCAAATCGCCCAACGTTAAGTCGAAGATTCATGCCT
GAGCCAGGAACTCCTGAGTATGAAGAACTCAAGACAAATCCTGACAAGGCATACTTGAAA
ACAATCACTCCTCAACTGCAGACATTACTAGGAATTTCTCTCATAGAGATATTATCAAGG
CATGCATCAGATGAGATTTACCTTGGACAACGGGACTCATCCGAATGGACAAAGGATCAA
GAACCCATTGCTGCTTTTGAGAGATTTGGGAAGAAGTTAAGTGAGATCGAGGATCAAATT
ATACAGATGAATGGTGATAAGAAATGGAAAAATAGGTCAGGGCCTGTTAACGTTCCATAT
ACATTGCTCTTCCCTACAAGTGAACAAGGACTCACAGGCAAAGGAATACCTAATAGTGTG
TCAATATAG