Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400028070
CDS Infomation

pacid=37477838 polypeptide=PGSC0003DMP400019138 locus=PGSC0003DMG401010824 ID=PGSC0003DMT400028070.v4.03 annot-version=v4.03
Sequence

ATGGAAAGACCCAGTGGAGAGAAACGTAGACTTGATGTTAGCAGTAGTGAAGAAGGTCAA
CCTGATAGAAAAAGACCAGCTCTTGCCAGTGTTATTGTTGAAGCGCTCAAGGTGGACAGT
CTGCAGAAACTCTGCTCATCACTGGAGCCAATTCTTCGGAGAGTTGTTAGTGAAGAAGTG
GAGCGGGCTTTGGCAAAACTTGGCCCTACTAAACTTAATGCAAGGGTTTCTCCAAAAAGA
ATTGAAGGGCCAAATGGGAGAAATTTGCAGCTTCAGTTCAGGTCTAAATTGTCACTGCCT
CTCTTTACAGGAGGGAAAGTAGAAGGAGAACAGGGTTCTGCTATCCATATTGTCTTGCTT
AATGGAAATACAGGCCATGTTGTAACAGTCGGCCCAGAGTCGTCTGTTAAACTAGATGTT
GTTGTGCTTGGAGGAGATTTTAATAATGAGGACGAAGATGGATGGACTGAAGAAGAATTT
GAGTCTCACATTGTGAAGGAGCGTGATGGGAAAAGGCCGCTTCTTACAGGAGACTTGCAA
GTGATATTGAAGGAAGGTGTAGGTAGTCTTGGTGAGTTTACATTTACTGACAACTCTAGC
TGGATTAGAAGCAGAAAGTTCAGGCTAGGCTTAAAAGTTGTATCAGGTTCTCGAGAGGGA
ATTCATATTCGAGAGGCAAAAACAGAAGCCTTCAGTGTGAAGGATCATCGAGGAGAATTG
TACAAGAAACATTATCCACCTGCATTAAACGATGATGTTTGGAGATTGGAAAAGATAGGA
AAAGATGGATCCTTCCACAAGAGGCTAAATAAAGCTGGCATATATACGGTGGAAGACTTT
CTACGGCTCATCGTGAGAGACTCTCAGAGGCTCCGAAATATCCTGGGAAGTGGAATGTCA
AATAAGATGTGGGATGCTCTTGTGGAGCATGCTAAGACCTGTGTTCTTAGTGGGAAGCTC
TATGTCTATTATCCTGATGATATGAAGAGTGTCGGGGTTGTTTTTAGCAATATTTATGAG
TTGTGTGGTTTAATCTCTGGTGGACAGTATCATTCAGTTGATTCTCTTTCAGAGGATCAA
AAGGAATATGTGGACAGCTTAGTCAAGAAGGCATATGACAACTGGATGCATGTTGTTGAA
TATGATGGCAAATCTCTTTTAAGCCTTAATCAGAATAAAACCTCAGATGCTCCTCAGTAT
GATCCTTCAACTGGTTCTCAGAACCATCCTAATTCATTTGATCATCAACTCAATCTGCCA
AGTCTTCCTGCTTCAACTTCATCAGAGCAGCCTCCTATGAATTCAGGATTGAACATGGGA
TTGGAAGGGTATAACGATAGTCTAATGGGTACATATACCACAGAGTCTCAGAACACAAAT
GTTAGTGTCAATGAACAGTTAAGTGGTGCTTCATTTTCTCAAAACCACTTTGTAGGCATG
TCGCAACAAGCTCAGCAACCTGGAAGTGAGAGTAGACTGGCCCTTCACCCACCACAGCCA
TCATTTTCTAGCTTTTTTGCTGCTAGCACTCCTAATTCATCCTATAAAGGAACTGATGAC
TTCTTCACAGAGGAAGAGATACGCACCAGAAGTCATGAAATGTTAGAGAATGACGACATG
CAACATCTTCTCCATATATTCAACATGGGTGGCCAGCATCATGCTTCTTCTAGTACCTCA
GAAGATAATAATTACCCATATGGATCACCATACATGCCCAGTATGTCTTCAAGCTTTGGT
ATTGATGAGGACCGTACACGTTCAGGAAAGGCTGTCGTTGGGTGGCTCAAACTGAAAGCA
GCATTGAGATGGGGCATCTTCATCAGGAAGAAAGCTGCTGAGAAAAGAGCACAGATTGTT
GAATTGGATGACCCCTAG

Peptide Sequence

PEP ID

PGSC0003DMP400019138
PEP Infomation

pacid=37477838 transcript=PGSC0003DMT400028070 locus=PGSC0003DMG401010824 ID=PGSC0003DMT400028070.v4.03 annot-version=v4.03
Sequence

MERPSGEKRRLDVSSSEEGQPDRKRPALASVIVEALKVDSLQKLCSSLEPILRRVVSEEV
ERALAKLGPTKLNARVSPKRIEGPNGRNLQLQFRSKLSLPLFTGGKVEGEQGSAIHIVLL
NGNTGHVVTVGPESSVKLDVVVLGGDFNNEDEDGWTEEEFESHIVKERDGKRPLLTGDLQ
VILKEGVGSLGEFTFTDNSSWIRSRKFRLGLKVVSGSREGIHIREAKTEAFSVKDHRGEL
YKKHYPPALNDDVWRLEKIGKDGSFHKRLNKAGIYTVEDFLRLIVRDSQRLRNILGSGMS
NKMWDALVEHAKTCVLSGKLYVYYPDDMKSVGVVFSNIYELCGLISGGQYHSVDSLSEDQ
KEYVDSLVKKAYDNWMHVVEYDGKSLLSLNQNKTSDAPQYDPSTGSQNHPNSFDHQLNLP
SLPASTSSEQPPMNSGLNMGLEGYNDSLMGTYTTESQNTNVSVNEQLSGASFSQNHFVGM
SQQAQQPGSESRLALHPPQPSFSSFFAASTPNSSYKGTDDFFTEEEIRTRSHEMLENDDM
QHLLHIFNMGGQHHASSSTSEDNNYPYGSPYMPSMSSSFGIDEDRTRSGKAVVGWLKLKA
ALRWGIFIRKKAAEKRAQIVELDDP*

Transcript Sequence

Transcript ID

PGSC0003DMT400028070
Transcript Infomation

pacid=37477838 locus=PGSC0003DMG401010824 ID=PGSC0003DMT400028070.v4.03 annot-version=v4.03
Sequence

ATGGAAAGACCCAGTGGAGAGAAACGTAGACTTGATGTTAGCAGTAGTGAAGAAGGTCAA
CCTGATAGAAAAAGACCAGCTCTTGCCAGTGTTATTGTTGAAGCGCTCAAGGTGGACAGT
CTGCAGAAACTCTGCTCATCACTGGAGCCAATTCTTCGGAGAGTTGTTAGTGAAGAAGTG
GAGCGGGCTTTGGCAAAACTTGGCCCTACTAAACTTAATGCAAGGGTTTCTCCAAAAAGA
ATTGAAGGGCCAAATGGGAGAAATTTGCAGCTTCAGTTCAGGTCTAAATTGTCACTGCCT
CTCTTTACAGGAGGGAAAGTAGAAGGAGAACAGGGTTCTGCTATCCATATTGTCTTGCTT
AATGGAAATACAGGCCATGTTGTAACAGTCGGCCCAGAGTCGTCTGTTAAACTAGATGTT
GTTGTGCTTGGAGGAGATTTTAATAATGAGGACGAAGATGGATGGACTGAAGAAGAATTT
GAGTCTCACATTGTGAAGGAGCGTGATGGGAAAAGGCCGCTTCTTACAGGAGACTTGCAA
GTGATATTGAAGGAAGGTGTAGGTAGTCTTGGTGAGTTTACATTTACTGACAACTCTAGC
TGGATTAGAAGCAGAAAGTTCAGGCTAGGCTTAAAAGTTGTATCAGGTTCTCGAGAGGGA
ATTCATATTCGAGAGGCAAAAACAGAAGCCTTCAGTGTGAAGGATCATCGAGGAGAATTG
TACAAGAAACATTATCCACCTGCATTAAACGATGATGTTTGGAGATTGGAAAAGATAGGA
AAAGATGGATCCTTCCACAAGAGGCTAAATAAAGCTGGCATATATACGGTGGAAGACTTT
CTACGGCTCATCGTGAGAGACTCTCAGAGGCTCCGAAATATCCTGGGAAGTGGAATGTCA
AATAAGATGTGGGATGCTCTTGTGGAGCATGCTAAGACCTGTGTTCTTAGTGGGAAGCTC
TATGTCTATTATCCTGATGATATGAAGAGTGTCGGGGTTGTTTTTAGCAATATTTATGAG
TTGTGTGGTTTAATCTCTGGTGGACAGTATCATTCAGTTGATTCTCTTTCAGAGGATCAA
AAGGAATATGTGGACAGCTTAGTCAAGAAGGCATATGACAACTGGATGCATGTTGTTGAA
TATGATGGCAAATCTCTTTTAAGCCTTAATCAGAATAAAACCTCAGATGCTCCTCAGTAT
GATCCTTCAACTGGTTCTCAGAACCATCCTAATTCATTTGATCATCAACTCAATCTGCCA
AGTCTTCCTGCTTCAACTTCATCAGAGCAGCCTCCTATGAATTCAGGATTGAACATGGGA
TTGGAAGGGTATAACGATAGTCTAATGGGTACATATACCACAGAGTCTCAGAACACAAAT
GTTAGTGTCAATGAACAGTTAAGTGGTGCTTCATTTTCTCAAAACCACTTTGTAGGCATG
TCGCAACAAGCTCAGCAACCTGGAAGTGAGAGTAGACTGGCCCTTCACCCACCACAGCCA
TCATTTTCTAGCTTTTTTGCTGCTAGCACTCCTAATTCATCCTATAAAGGAACTGATGAC
TTCTTCACAGAGGAAGAGATACGCACCAGAAGTCATGAAATGTTAGAGAATGACGACATG
CAACATCTTCTCCATATATTCAACATGGGTGGCCAGCATCATGCTTCTTCTAGTACCTCA
GAAGATAATAATTACCCATATGGATCACCATACATGCCCAGTATGTCTTCAAGCTTTGGT
ATTGATGAGGACCGTACACGTTCAGGAAAGGCTGTCGTTGGGTGGCTCAAACTGAAAGCA
GCATTGAGATGGGGCATCTTCATCAGGAAGAAAGCTGCTGAGAAAAGAGCACAGATTGTT
GAATTGGATGACCCCTAG