Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400028037
CDS Infomation

pacid=37460398 polypeptide=PGSC0003DMP400019106 locus=PGSC0003DMG400010812 ID=PGSC0003DMT400028037.v4.03 annot-version=v4.03
Sequence

ATGGACCATCAAACATCCATTACTCCTCCCGTTCTCATCTTCCCTCTCCCTTTACAAAGC
ACAATAAACTCCAATCTACAATTAGCTGAGCTCTTATGCCTTGCTGGCCTTAGAGTCACT
TTTCTCAACACAAATCACAATCAACAACGTCTCGTTGGTAACTCCAATGTCGAATCTCGT
TTCAAACAATATCCTGGATTCCGATTCCTTACATTATCCGATGGCCTCCCCGATGACCAC
CCGCGTTCGGTCGAACAATTCGGAGACATTCTCAGCTCCTTGCAGACCATGGCTGAGCCT
TTACTCAAACAAATGCTTAGCGCCCTTGTTAAGGAGCCAGTCACATGTGTGATATTAGAT
GGCCTGTTTTATTATGGTGTGGATATTGGAAATGAGATGGGAGTTCCAGTTATTACATTT
GACACTATTAGTCCTTCCTGCTTTTGGATTTATCTTTCTCTGCCCAAACTAATTGAGGCT
GGAGTTCTTCCCTTCAAAGGAAACGACTTGGATGCATTGGTAACACATTTACCAGCCATG
GAAGGTCTTCTTAGACGACGAGATCTTCCACACTTTTGTCTTTTAGATTATAAGACCGAT
CAAAATTCTCAAGCCGTTTTTAAGGAGATTGAGCGACTCCCAAAAGCCCATGGGCTCATA
TTAAACTCGTTTGAAGATTTAGATGGGCCTTTTCTTTCTAGTGTCCGTTCTTACTTTCCT
AAAACATATGCAATTGGACCATTGCCCTTGAACTTGAAGAGTAGACTTGCTGCTAAAGCT
ACTCCACTATTGTCATCCTCAAATAGCTTGTGGGAAGAAGACCATACTTCTATAAAATGG
CTCAACGCGCAATCCAATGGATCCGTAATTTATGTAAGTTTCGGAAGCCTTCTTGTTGTT
TCAAGAGATGAGATGATGGAATTTTGGCATGGACTAATGAATAGTAAAGTTAAATTTTTG
TGGGTCATGAGGCCTAACATGTTGAAGGGAGATGTATCACGTGATCAATTTATGAAGGAA
CTTGTTGAGGGTTCCAAAGGAATTGGTTACATAGTGAGTTGGGCTCCACAAAAGATGGTA
CTAGCCCACCCATCCGTTGGTGGGTTTTTAACCCATAGTGGATGGAACTCGACACTGGAA
AGCATTATTGAAGGAAAGCCCATGATATGTTGGCCTCAATATGTGGATCAAAGAGTTACA
AGTAGACTAGTAAATGAATTTTGGAAGATTGGGTTAGACATGAAAGACATTTGTGATAGA
TTCGTCGTAGAGAAAATGGTAAAAGATCTTATGGAAACAAAAAAGGATGAGTACAAGAAA
TCGGTTGAGAAATTATCAAAACTGGCAAAACTAAGTGTTCAAGAAGGAGGTTTATCGTAT
AGTAACCTCGACTGTCTCATCAATGATATCAAAGGGTTAACTAGAACTGTAGAGAATGGG
AAAATGCATAACAACGTCACAAGCTACTAG

Peptide Sequence

PEP ID

PGSC0003DMP400019106
PEP Infomation

pacid=37460398 transcript=PGSC0003DMT400028037 locus=PGSC0003DMG400010812 ID=PGSC0003DMT400028037.v4.03 annot-version=v4.03
Sequence

MDHQTSITPPVLIFPLPLQSTINSNLQLAELLCLAGLRVTFLNTNHNQQRLVGNSNVESR
FKQYPGFRFLTLSDGLPDDHPRSVEQFGDILSSLQTMAEPLLKQMLSALVKEPVTCVILD
GLFYYGVDIGNEMGVPVITFDTISPSCFWIYLSLPKLIEAGVLPFKGNDLDALVTHLPAM
EGLLRRRDLPHFCLLDYKTDQNSQAVFKEIERLPKAHGLILNSFEDLDGPFLSSVRSYFP
KTYAIGPLPLNLKSRLAAKATPLLSSSNSLWEEDHTSIKWLNAQSNGSVIYVSFGSLLVV
SRDEMMEFWHGLMNSKVKFLWVMRPNMLKGDVSRDQFMKELVEGSKGIGYIVSWAPQKMV
LAHPSVGGFLTHSGWNSTLESIIEGKPMICWPQYVDQRVTSRLVNEFWKIGLDMKDICDR
FVVEKMVKDLMETKKDEYKKSVEKLSKLAKLSVQEGGLSYSNLDCLINDIKGLTRTVENG
KMHNNVTSY*

Transcript Sequence

Transcript ID

PGSC0003DMT400028037
Transcript Infomation

pacid=37460398 locus=PGSC0003DMG400010812 ID=PGSC0003DMT400028037.v4.03 annot-version=v4.03
Sequence

ATGGACCATCAAACATCCATTACTCCTCCCGTTCTCATCTTCCCTCTCCCTTTACAAAGC
ACAATAAACTCCAATCTACAATTAGCTGAGCTCTTATGCCTTGCTGGCCTTAGAGTCACT
TTTCTCAACACAAATCACAATCAACAACGTCTCGTTGGTAACTCCAATGTCGAATCTCGT
TTCAAACAATATCCTGGATTCCGATTCCTTACATTATCCGATGGCCTCCCCGATGACCAC
CCGCGTTCGGTCGAACAATTCGGAGACATTCTCAGCTCCTTGCAGACCATGGCTGAGCCT
TTACTCAAACAAATGCTTAGCGCCCTTGTTAAGGAGCCAGTCACATGTGTGATATTAGAT
GGCCTGTTTTATTATGGTGTGGATATTGGAAATGAGATGGGAGTTCCAGTTATTACATTT
GACACTATTAGTCCTTCCTGCTTTTGGATTTATCTTTCTCTGCCCAAACTAATTGAGGCT
GGAGTTCTTCCCTTCAAAGGAAACGACTTGGATGCATTGGTAACACATTTACCAGCCATG
GAAGGTCTTCTTAGACGACGAGATCTTCCACACTTTTGTCTTTTAGATTATAAGACCGAT
CAAAATTCTCAAGCCGTTTTTAAGGAGATTGAGCGACTCCCAAAAGCCCATGGGCTCATA
TTAAACTCGTTTGAAGATTTAGATGGGCCTTTTCTTTCTAGTGTCCGTTCTTACTTTCCT
AAAACATATGCAATTGGACCATTGCCCTTGAACTTGAAGAGTAGACTTGCTGCTAAAGCT
ACTCCACTATTGTCATCCTCAAATAGCTTGTGGGAAGAAGACCATACTTCTATAAAATGG
CTCAACGCGCAATCCAATGGATCCGTAATTTATGTAAGTTTCGGAAGCCTTCTTGTTGTT
TCAAGAGATGAGATGATGGAATTTTGGCATGGACTAATGAATAGTAAAGTTAAATTTTTG
TGGGTCATGAGGCCTAACATGTTGAAGGGAGATGTATCACGTGATCAATTTATGAAGGAA
CTTGTTGAGGGTTCCAAAGGAATTGGTTACATAGTGAGTTGGGCTCCACAAAAGATGGTA
CTAGCCCACCCATCCGTTGGTGGGTTTTTAACCCATAGTGGATGGAACTCGACACTGGAA
AGCATTATTGAAGGAAAGCCCATGATATGTTGGCCTCAATATGTGGATCAAAGAGTTACA
AGTAGACTAGTAAATGAATTTTGGAAGATTGGGTTAGACATGAAAGACATTTGTGATAGA
TTCGTCGTAGAGAAAATGGTAAAAGATCTTATGGAAACAAAAAAGGATGAGTACAAGAAA
TCGGTTGAGAAATTATCAAAACTGGCAAAACTAAGTGTTCAAGAAGGAGGTTTATCGTAT
AGTAACCTCGACTGTCTCATCAATGATATCAAAGGGTTAACTAGAACTGTAGAGAATGGG
AAAATGCATAACAACGTCACAAGCTACTAG