Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400028015
CDS Infomation

pacid=37443998 polypeptide=PGSC0003DMP400019090 locus=PGSC0003DMG400010802 ID=PGSC0003DMT400028015.v4.03 annot-version=v4.03
Sequence

ATGGTAACCCTTTATTCTTCCCCTTCCACTAACTGTTCTGGGGTTTTTTCATCTTACTCC
AATTCTTCTATTGGCTTCTACAATTATCACAACAACTTCCCTATTTCATCCAGAAAGTTT
GGTTCTCACAAGATTTCTTTGCAAATTAATGCCATTCGCATGCAAGATGGTGCTGTAGTG
GCTCAACCTAGCAAAACCCAAGATGAAACTCCTTTGAAGAAATTGAAAGATGGAATTTTG
TCAAAGGAGCAGAAACATACATTTGATTTTGATAGCAACAAAGATAAATCAACTGTCAGT
ATTACTGTTGTTGGTGCTTCAGGAGATCTTGCCAAAAAAAAGATATTTCCTGCACTTTTT
GCACTTTATTATGAGGGTTGCTTACCGGAGCATTTCACTATTTTTGGCTATGCCCGGAGT
AAGATGACTGATGATGAACTCAGGAACATGGTCAGCAAGACACTTACTTGCAGGATTGAT
AAGAGGGAAAATTGTGGTGAAAAGATGGAACAGTTTCTAGAAAGGTGTTTCTACCATAGT
GGACAATATGATTCCCAAGAAAACTTTGCAGAGCTTGATAAAAAACTGAAAGAACATGAG
GCTGGAAGGTTTTCCAATCGTCTGTTTTACTTGTCCATTCCACCAAATATTTTTATAAAT
GCTGTACGATGTGCAAGCCTCTCTGCGTCATCTGCTCATGGATGGACTAGAGTCATTGTA
GAGAAACCCTTTGGTCGGGATTCTGAATCCTCTGCTGCATTAACAGGAGCACTTAAGCAG
TACTTGAAGGAAGATCAAATTTTCAGGATTGATCACTATTTAGGGAAGGAGCTTGTGGAA
AACCTTTCTGTCCTTCGTTTCTCCAACTTGATATTTGAACCCTTATGGTCAAGGCAGTAT
ATAAGGAACGTGCAATTTATTTTCTCTGAAGATTTTGGCACTGAAGGAAGGGGAGGTTAT
TTTGATCATTATGGGATAATTAGAGACATTATGCAAAACCATTTGCTTCAAATTCTTGCC
CTCTTTGCCATGGAAACACCTGTCAGTTTGGATGCAGAAGATATCAGGAATGAAAAGGTA
AAAGTTCTGCGTTCTATGAGACCTTTACAACTAGATGATGTTATTGTCGGGCAGTACAAA
AGTCACACAAAAGGGGGTGTTAACTATCCTGGTTATACCGACGACAAGACTGTACCCAAG
GACAGTCTAACCCCAACTTTTGCTGCAGCTGCTCTTTTCATAGATAATGCAAGATGGGAT
GGTGTGCCTTTCCTTATGAAGGCTGGAAAAGCTTTACATACCAGGAGTGCGGAAATAAGA
GTACAATTCAGGCACGTGCCAGGAAACTTATACAATAAGAACTTTGGCTCAGATCTAGAT
CAGGCAACAAACGAGCTTGTTATCCGTGTTCAACCTGACGAAGCTATATACCTAAAGATC
AATAACAAAGTTCCCGGTCTAGGAATGAGACTGGATCGCAGTAATCTGAATCTGCTTTAC
TCAGCAAGATACTCAAAGGAGATCCCTGATGCATATGAGCGGCTACTTCTTGATGCCATA
GAAGGTGAACGTAGGCTTTTTATCCGCAGTGATGAACTGGATGCTGCTTGGTCTCTTTTC
ACACCAGTGTTGAAAGACCTTGAGCATAAGAAAATAGTACCGGAAAGCTACCCCTATGGA
AGTCGAGGACCTATTGGAGCACATTACCTTGCAGCACGATATAAAGTAAGATGGGGTGAT
CTTGCTTAG

Peptide Sequence

PEP ID

PGSC0003DMP400019090
PEP Infomation

pacid=37443998 transcript=PGSC0003DMT400028015 locus=PGSC0003DMG400010802 ID=PGSC0003DMT400028015.v4.03 annot-version=v4.03
Sequence

MVTLYSSPSTNCSGVFSSYSNSSIGFYNYHNNFPISSRKFGSHKISLQINAIRMQDGAVV
AQPSKTQDETPLKKLKDGILSKEQKHTFDFDSNKDKSTVSITVVGASGDLAKKKIFPALF
ALYYEGCLPEHFTIFGYARSKMTDDELRNMVSKTLTCRIDKRENCGEKMEQFLERCFYHS
GQYDSQENFAELDKKLKEHEAGRFSNRLFYLSIPPNIFINAVRCASLSASSAHGWTRVIV
EKPFGRDSESSAALTGALKQYLKEDQIFRIDHYLGKELVENLSVLRFSNLIFEPLWSRQY
IRNVQFIFSEDFGTEGRGGYFDHYGIIRDIMQNHLLQILALFAMETPVSLDAEDIRNEKV
KVLRSMRPLQLDDVIVGQYKSHTKGGVNYPGYTDDKTVPKDSLTPTFAAAALFIDNARWD
GVPFLMKAGKALHTRSAEIRVQFRHVPGNLYNKNFGSDLDQATNELVIRVQPDEAIYLKI
NNKVPGLGMRLDRSNLNLLYSARYSKEIPDAYERLLLDAIEGERRLFIRSDELDAAWSLF
TPVLKDLEHKKIVPESYPYGSRGPIGAHYLAARYKVRWGDLA*

Transcript Sequence

Transcript ID

PGSC0003DMT400028015
Transcript Infomation

pacid=37443998 locus=PGSC0003DMG400010802 ID=PGSC0003DMT400028015.v4.03 annot-version=v4.03
Sequence

ATGGTAACCCTTTATTCTTCCCCTTCCACTAACTGTTCTGGGGTTTTTTCATCTTACTCC
AATTCTTCTATTGGCTTCTACAATTATCACAACAACTTCCCTATTTCATCCAGAAAGTTT
GGTTCTCACAAGATTTCTTTGCAAATTAATGCCATTCGCATGCAAGATGGTGCTGTAGTG
GCTCAACCTAGCAAAACCCAAGATGAAACTCCTTTGAAGAAATTGAAAGATGGAATTTTG
TCAAAGGAGCAGAAACATACATTTGATTTTGATAGCAACAAAGATAAATCAACTGTCAGT
ATTACTGTTGTTGGTGCTTCAGGAGATCTTGCCAAAAAAAAGATATTTCCTGCACTTTTT
GCACTTTATTATGAGGGTTGCTTACCGGAGCATTTCACTATTTTTGGCTATGCCCGGAGT
AAGATGACTGATGATGAACTCAGGAACATGGTCAGCAAGACACTTACTTGCAGGATTGAT
AAGAGGGAAAATTGTGGTGAAAAGATGGAACAGTTTCTAGAAAGGTGTTTCTACCATAGT
GGACAATATGATTCCCAAGAAAACTTTGCAGAGCTTGATAAAAAACTGAAAGAACATGAG
GCTGGAAGGTTTTCCAATCGTCTGTTTTACTTGTCCATTCCACCAAATATTTTTATAAAT
GCTGTACGATGTGCAAGCCTCTCTGCGTCATCTGCTCATGGATGGACTAGAGTCATTGTA
GAGAAACCCTTTGGTCGGGATTCTGAATCCTCTGCTGCATTAACAGGAGCACTTAAGCAG
TACTTGAAGGAAGATCAAATTTTCAGGATTGATCACTATTTAGGGAAGGAGCTTGTGGAA
AACCTTTCTGTCCTTCGTTTCTCCAACTTGATATTTGAACCCTTATGGTCAAGGCAGTAT
ATAAGGAACGTGCAATTTATTTTCTCTGAAGATTTTGGCACTGAAGGAAGGGGAGGTTAT
TTTGATCATTATGGGATAATTAGAGACATTATGCAAAACCATTTGCTTCAAATTCTTGCC
CTCTTTGCCATGGAAACACCTGTCAGTTTGGATGCAGAAGATATCAGGAATGAAAAGGTA
AAAGTTCTGCGTTCTATGAGACCTTTACAACTAGATGATGTTATTGTCGGGCAGTACAAA
AGTCACACAAAAGGGGGTGTTAACTATCCTGGTTATACCGACGACAAGACTGTACCCAAG
GACAGTCTAACCCCAACTTTTGCTGCAGCTGCTCTTTTCATAGATAATGCAAGATGGGAT
GGTGTGCCTTTCCTTATGAAGGCTGGAAAAGCTTTACATACCAGGAGTGCGGAAATAAGA
GTACAATTCAGGCACGTGCCAGGAAACTTATACAATAAGAACTTTGGCTCAGATCTAGAT
CAGGCAACAAACGAGCTTGTTATCCGTGTTCAACCTGACGAAGCTATATACCTAAAGATC
AATAACAAAGTTCCCGGTCTAGGAATGAGACTGGATCGCAGTAATCTGAATCTGCTTTAC
TCAGCAAGATACTCAAAGGAGATCCCTGATGCATATGAGCGGCTACTTCTTGATGCCATA
GAAGGTGAACGTAGGCTTTTTATCCGCAGTGATGAACTGGATGCTGCTTGGTCTCTTTTC
ACACCAGTGTTGAAAGACCTTGAGCATAAGAAAATAGTACCGGAAAGCTACCCCTATGGA
AGTCGAGGACCTATTGGAGCACATTACCTTGCAGCACGATATAAAGTAAGATGGGGTGAT
CTTGCTTAG