Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400028002
CDS Infomation

pacid=37446121 polypeptide=PGSC0003DMP400019078 locus=PGSC0003DMG401010796 ID=PGSC0003DMT400028002.v4.03 annot-version=v4.03
Sequence

ATGCCAGCAACAGATTTTTCAACTTTTGGGAGGTCTATTCTGAGTTTACGTCGCGATCAA
CAAGTACATTCTATGGAATCTGGTGGTCATGAGGGAACTAGCCAAGAGCTAGAGCTTGAA
GCTTTTCAAAAGCAAGTAGCTGAGCTTTTCAATGATTTGGCATCTGCTGACTCTGATCAG
CTTTTGTCGATTCCTTGGATTCACAAGCTATTGGATGTGTTCCTTTCTTGCCAGGAGCAG
TTTAAGTCTATTGTGTCTAAGAATAAGGGGTTGTTGAATAAATCCCCTGCTGACCGTTAC
GTAATGGAATATTACGAAAGGAGTGTGAAAGCTTTAGATGTGTGTAATGCGATACGAGAT
GGGATTGACTTGATCAGGCAATGGCAGAAGCAGTTGGAGATTGTTTATTATGCATTGGAT
AACCAGAGGAGTATTGGGGAAGGTCAAATTCGTCGTTCCATGAAAGCTTTGATTGATTTG
GCAATTGGTATGATTGATGAAAAAGAGTCTAATTCAAGTGTTGCTCATAGAAACAGGTCA
TTTGGACGAAACAATGCTCAGAAGGATCATAATTCGTTGGGCCAATTTCGATCATTGTCA
TGGAGTGTATCGCGGAATTGGTCTGCTGCTAAGCAACTTCAAGCAATTGGTCAAAACTTA
GTTGCTCCAAAAAATAATGAAATTACTGCCACCAATGGATTAGCTGTAGCTGTTTTTACA
ATGAGTTATGTGCTTTACTTTGTAATGTGGACGCTTGTGGCTGCAATTCCCTGCCAAGAC
CGTGGCCTTCAGACACATTTTCATGTTACTAGGCAATTCATTTGGGCTGCTCCAGTTCTC
GCCCTCCATGAGAGGATTTTGGAGGAGTCAAGAAAGAGGGAGCGTAGAAATGCTTGTGGA
TTGTTGAGGGAGATTAATAAGATCGAGATATGCGCCCGCCACATGAATGAATTGACCGAT
ACCATTCATTTCCCCCTTTCAGAGGAAAAGGAAGGGGAAGTTAAGCAAAGAGTTCAGGAG
CTTGGGATTGTCTACTATGGTCTAAAAGATGGATTGGGCCCGTTGGAGCGTCAGGTACGA
GAAGTGTTTCATAGGATTGTTCGAAGCAGGACGGAAGGGCTCGACTCTATCGGGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400019078
PEP Infomation

pacid=37446121 transcript=PGSC0003DMT400028002 locus=PGSC0003DMG401010796 ID=PGSC0003DMT400028002.v4.03 annot-version=v4.03
Sequence

MPATDFSTFGRSILSLRRDQQVHSMESGGHEGTSQELELEAFQKQVAELFNDLASADSDQ
LLSIPWIHKLLDVFLSCQEQFKSIVSKNKGLLNKSPADRYVMEYYERSVKALDVCNAIRD
GIDLIRQWQKQLEIVYYALDNQRSIGEGQIRRSMKALIDLAIGMIDEKESNSSVAHRNRS
FGRNNAQKDHNSLGQFRSLSWSVSRNWSAAKQLQAIGQNLVAPKNNEITATNGLAVAVFT
MSYVLYFVMWTLVAAIPCQDRGLQTHFHVTRQFIWAAPVLALHERILEESRKRERRNACG
LLREINKIEICARHMNELTDTIHFPLSEEKEGEVKQRVQELGIVYYGLKDGLGPLERQVR
EVFHRIVRSRTEGLDSIG*

Transcript Sequence

Transcript ID

PGSC0003DMT400028002
Transcript Infomation

pacid=37446121 locus=PGSC0003DMG401010796 ID=PGSC0003DMT400028002.v4.03 annot-version=v4.03
Sequence

ATGCCAGCAACAGATTTTTCAACTTTTGGGAGGTCTATTCTGAGTTTACGTCGCGATCAA
CAAGTACATTCTATGGAATCTGGTGGTCATGAGGGAACTAGCCAAGAGCTAGAGCTTGAA
GCTTTTCAAAAGCAAGTAGCTGAGCTTTTCAATGATTTGGCATCTGCTGACTCTGATCAG
CTTTTGTCGATTCCTTGGATTCACAAGCTATTGGATGTGTTCCTTTCTTGCCAGGAGCAG
TTTAAGTCTATTGTGTCTAAGAATAAGGGGTTGTTGAATAAATCCCCTGCTGACCGTTAC
GTAATGGAATATTACGAAAGGAGTGTGAAAGCTTTAGATGTGTGTAATGCGATACGAGAT
GGGATTGACTTGATCAGGCAATGGCAGAAGCAGTTGGAGATTGTTTATTATGCATTGGAT
AACCAGAGGAGTATTGGGGAAGGTCAAATTCGTCGTTCCATGAAAGCTTTGATTGATTTG
GCAATTGGTATGATTGATGAAAAAGAGTCTAATTCAAGTGTTGCTCATAGAAACAGGTCA
TTTGGACGAAACAATGCTCAGAAGGATCATAATTCGTTGGGCCAATTTCGATCATTGTCA
TGGAGTGTATCGCGGAATTGGTCTGCTGCTAAGCAACTTCAAGCAATTGGTCAAAACTTA
GTTGCTCCAAAAAATAATGAAATTACTGCCACCAATGGATTAGCTGTAGCTGTTTTTACA
ATGAGTTATGTGCTTTACTTTGTAATGTGGACGCTTGTGGCTGCAATTCCCTGCCAAGAC
CGTGGCCTTCAGACACATTTTCATGTTACTAGGCAATTCATTTGGGCTGCTCCAGTTCTC
GCCCTCCATGAGAGGATTTTGGAGGAGTCAAGAAAGAGGGAGCGTAGAAATGCTTGTGGA
TTGTTGAGGGAGATTAATAAGATCGAGATATGCGCCCGCCACATGAATGAATTGACCGAT
ACCATTCATTTCCCCCTTTCAGAGGAAAAGGAAGGGGAAGTTAAGCAAAGAGTTCAGGAG
CTTGGGATTGTCTACTATGGTCTAAAAGATGGATTGGGCCCGTTGGAGCGTCAGGTACGA
GAAGTGTTTCATAGGATTGTTCGAAGCAGGACGGAAGGGCTCGACTCTATCGGGTGA