Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400027962
CDS Infomation

pacid=37444884 polypeptide=PGSC0003DMP400019053 locus=PGSC0003DMG400010774 ID=PGSC0003DMT400027962.v4.03 annot-version=v4.03
Sequence

ATGGGAAAGAGAGGTGGGCTTTTTAGATATGGTGATGGTGTTGATAAGTTGCTAATGTTT
TTTGGTACTTTAGGATGCATTGGAGATGGGCTTATGACTCCTCTTAATATGTTTATTCTT
AGTTCTCTTATTGATGATTATGGAGGTGCTGCTATTGATGATGATTCTTTCACTAATGCT
ATTGTGGACAAGTACTCACTCAGGTTGCTCTATGTTGCAATTGGAGTTGGTATATCTGCT
TGCATTGGGGGAATTTGCTGGACAAGAAGTGCAGAGAGACAAACAAGTCGAATAAGGATG
GAGTACTTAAAATCAGTGCTTAGACAAGAAGTTAGTTTCTTTGACAAGCAAGATGGTTCC
TCCAGTACTAGTTTTCAAGTTGTTTCCACAATCTCAGCTGATGCTCATTCAATCCAAGAT
GCTATAGCAGAGAAGATACCTAATTGTGTTGCTCATCTGTCAACGTTCATTTTTGGCTTA
ATTCTTGCTTTCTACCTGTCATGGAGACTAGCATTAGCTTCAGTTCCATTTTCACTTGGT
TTTGTTATACCTGGTGTAGCATTTGGGAAGCTACTTATGATCCAGGGAATGAAGATGAAG
GATGCCTATGGAGTTGCAGGGAGTGTAGCAGAACAAGCAATTTCATCGATTCGAACAGTT
TACTCTTATGTAGGGGAGAATGAAACACTAAAAAGATTCAGCATTGGTCTTGAGGAAAGT
TTGAATCTTGGTGTGAAACAAGGGCTTACTAAGGGATTGTTGTTAGGAAGTATGGGAATG
ATTTATGTGTCGTGGGCATTTCAATCATGGGCAGGGAGTGTACTTGTTTCTAATAGAGGA
GAAAGTGGTGGTCGCGTTTTCGTATCAGCTCTTTGTGTTGTTCTTGGAGGACTGTCTTGT
ATGAGTGCACTTCCAAATATCTCATTCATCGTTGAGGCAACAATTGCTGCTGCAAGAATT
TTTGAACTCATCGATCGTGTTCCTCAAATAGATTCTGAAGATGGTAAAGGGAAAATTCTA
GCATATGTAAGAGGAGATATTGAGTTCAAGGACGTAACTTTCAGTTATCCATCAAGATCA
GATATTCAGGTCCTCCAAGATTTTAGTCTTAAAGTGAAAGCTGGAAAGACAGTAGCAATT
GTGGGAGGCAGTGGTTCCGGAAAGTCCACTGTCATTTCTTTGCTAGAAAGATTTTATGAT
CCTATCAAAGGTGATATCTTACTTGATGGACATAAAATAAAGAGACTGCAACTTAAATGG
TTGAGATCTCAGATGGGGCTTGTAAATCAGGAGCCTGTTCTGTTTGCTACATCCATCAAG
GAAAATATACTCTTCGGAAAAGAAGGAGCTTCGATGAAAATGGTTGTTGAAGCTGCTAAG
GCTGCAAATGCACATGAATTTGTAGCCTCTTTACCGGATGGATATGATACTCATGTGGGA
CAATTTGGTTTTCAATTGTCTGGAGGACAGAAGCAAAGGATTGCTATAGCTAGGGCGTTG
ATTAAGGACCCGAAAATTCTTTTACTCGATGAAGCTACAAGCGCGCTGGATGCACAATCA
GAAAGAATTGTTCAAGAGGCTCTAGACCTGGCTTCACAAGGAAGGACAACAATCATCATT
GCTCATCGCCTCAGTACAATACGCAGGGCTGACAAAATTGTAGTTGTTGAGTCAGGGAGA
ATTGTTGAATCTGGTTCTCATGATGATCTAATGTGTAAGACTGATGAAGAAGGTGGAGTT
TACTTTAAAATGGTCAAATTGCAGCAATCAACAGCAAACAATGAAGGGCCATCTAGTCCG
TATCTTCCTAACGAGACAAGAAGCTACATGAGAAGGGGTTATAATATGCCTAGGTCCCCT
TATGTCGCTACGTCAAGTTGGCAAAATAGCCCTGCCTCTCCTTTTACCCCAGCAATAAGT
GTCAGTTATGCTCCCACCATTCATACATGCTCTTATTATGGTAGTGACGATGAGTATTTG
GAGAACTTCTCTCATCCAAGTCCCTCAACGTGGCGTTTGCTTCAAATGAATGCACCAGAG
TGGAAAATTGCTTTGTTGGGATGTTTAGGAGCTGTTACGTTTGGTGTACTTCAACCACTT
TATGCATTTTGCTTGGGATTAGTTGTATCAGCATATACATCAAATGATATTTCAAAGATA
AAGTCGGAGATCAAAATCTACAGCGTTGTCTTTTTGAGCATAGGTGTGACAAGTTTCATT
GCCAATCTACTCCAACATTACAATTTTGCTAAAATGGGAGAGAAACTGACCAAGAGAATC
AGGGAAAAGGTGCTTTCAAACTTGCTCACATTTGAAGTGGGCTGGTATGATCGAGACGAG
AACACTAGTGCAGCAGTTTGTGCAAGACTCTCCACTGAAGCCCGTATGGTTCGATCCCTT
GTAGGTGATCGTATGTCACTACTACTACAGGTTTCTGTCAGTGCTTCGACTGCTTTTGTG
CTTGCATTGATTGTCGCATGGAGAGTTGCTATTGTACTAATATCTATACAACCTTTACTC
ATAGCAAGCTTCTACTCGCGAAGTGTTCTGATGAAAAGAATGTCAGAAAGATCCCAAAAG
GCACAGAGTGAAGGAAGTCAGCTAGCAAGTGAAGCAGTAATCAATCACAGGACTATCACC
GCCTTCTCTTCTCAAGATCGAATGTTGGACCTCTTTTCTGAAACTCAGAAAGGACCGAGA
AAAGAAAATATTCGACAGTCATTGCTTTCTGGTGCTGGCTTGTTTTGCTCTCAGTTTCTA
ACCACAGCTGCCATTGCCTTAACATATTGGTATGGGGGAAGACTAATGAACAGAAAGCTA
CTAACTTCAAAGCACCTATTTCAAGTTTTCTTCCTTTTGATGAGTACCGGAAAAAATATA
GCAGATACAGGAAGTATGACTTCTGATTTGGCAAGAGGTAGCAGTGCAGTTGCATCTGTA
TTCGCTATCTTAGATCGAAAGACTGAGATTGAACCTGAGAACTCTGAAGGGATTAAAGTC
ATTAAGGTATTAAAAGGAAAGATAGAGCTGAAGAATGTCTTCTTTTACTATCCGTCGAGG
CCTGATCAAGCAATCTTCCAAGGAATGAATCTGAAAATTGAATCAGGAAAAACAGTAGCA
CTTGTCGGGCAAAGTGGTTCTGGAAAATCTACAATCATTGGCTTGATAGAAAGATTCTAT
GATCCAATAAAGGGACAGGTTCTAATTGATGACAGAGACATCAAAAGCTACAACTTGAAG
AGCTTAAGATCACAAATTGCTCTAGTGAGTCAAGAACCTACCCTTTTTGCAGGATCCATA
CGCGAAAATATCATTTATGGGAAAGAAGCAGCTACAGAGTCTGAAATCAAGAAAGCTGCC
ATTCGTGCTAACGCCCATGAATTTATAAGTGCTATGGAAGATGGTTATGAAACTTATTGT
GGTGAAAGAGGAGTCCAACTCTCAGGAGGGCAAAGGCAAAGAATAGCACTTGCACGAGCG
ATACTAAAGAATCCAACTATACTTCTCCTAGACGAGGCAACTAGCGCGCTTGACAGTGTA
TCTGAGAACTTAGTACAAGAAGCATTGGAGAAAATGATGATGAGTAGAACAAGTGTAGTT
GTAGCTCATCGATTATCAACGATACAGAAGGCAGACACCATAGCTGTGATTAAAAATGGA
AAGGTTGTGGAACAAGGATCACATTCTCAGCTGCTTGCCCTTGGAAAGAATGGCTCATAT
TATGGACTTATGAAGTTGCAATCTGGCCATTCTCCTTATAGGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400019053
PEP Infomation

pacid=37444884 transcript=PGSC0003DMT400027962 locus=PGSC0003DMG400010774 ID=PGSC0003DMT400027962.v4.03 annot-version=v4.03
Sequence

MGKRGGLFRYGDGVDKLLMFFGTLGCIGDGLMTPLNMFILSSLIDDYGGAAIDDDSFTNA
IVDKYSLRLLYVAIGVGISACIGGICWTRSAERQTSRIRMEYLKSVLRQEVSFFDKQDGS
SSTSFQVVSTISADAHSIQDAIAEKIPNCVAHLSTFIFGLILAFYLSWRLALASVPFSLG
FVIPGVAFGKLLMIQGMKMKDAYGVAGSVAEQAISSIRTVYSYVGENETLKRFSIGLEES
LNLGVKQGLTKGLLLGSMGMIYVSWAFQSWAGSVLVSNRGESGGRVFVSALCVVLGGLSC
MSALPNISFIVEATIAAARIFELIDRVPQIDSEDGKGKILAYVRGDIEFKDVTFSYPSRS
DIQVLQDFSLKVKAGKTVAIVGGSGSGKSTVISLLERFYDPIKGDILLDGHKIKRLQLKW
LRSQMGLVNQEPVLFATSIKENILFGKEGASMKMVVEAAKAANAHEFVASLPDGYDTHVG
QFGFQLSGGQKQRIAIARALIKDPKILLLDEATSALDAQSERIVQEALDLASQGRTTIII
AHRLSTIRRADKIVVVESGRIVESGSHDDLMCKTDEEGGVYFKMVKLQQSTANNEGPSSP
YLPNETRSYMRRGYNMPRSPYVATSSWQNSPASPFTPAISVSYAPTIHTCSYYGSDDEYL
ENFSHPSPSTWRLLQMNAPEWKIALLGCLGAVTFGVLQPLYAFCLGLVVSAYTSNDISKI
KSEIKIYSVVFLSIGVTSFIANLLQHYNFAKMGEKLTKRIREKVLSNLLTFEVGWYDRDE
NTSAAVCARLSTEARMVRSLVGDRMSLLLQVSVSASTAFVLALIVAWRVAIVLISIQPLL
IASFYSRSVLMKRMSERSQKAQSEGSQLASEAVINHRTITAFSSQDRMLDLFSETQKGPR
KENIRQSLLSGAGLFCSQFLTTAAIALTYWYGGRLMNRKLLTSKHLFQVFFLLMSTGKNI
ADTGSMTSDLARGSSAVASVFAILDRKTEIEPENSEGIKVIKVLKGKIELKNVFFYYPSR
PDQAIFQGMNLKIESGKTVALVGQSGSGKSTIIGLIERFYDPIKGQVLIDDRDIKSYNLK
SLRSQIALVSQEPTLFAGSIRENIIYGKEAATESEIKKAAIRANAHEFISAMEDGYETYC
GERGVQLSGGQRQRIALARAILKNPTILLLDEATSALDSVSENLVQEALEKMMMSRTSVV
VAHRLSTIQKADTIAVIKNGKVVEQGSHSQLLALGKNGSYYGLMKLQSGHSPYR*

Transcript Sequence

Transcript ID

PGSC0003DMT400027962
Transcript Infomation

pacid=37444884 locus=PGSC0003DMG400010774 ID=PGSC0003DMT400027962.v4.03 annot-version=v4.03
Sequence

ATGGGAAAGAGAGGTGGGCTTTTTAGATATGGTGATGGTGTTGATAAGTTGCTAATGTTT
TTTGGTACTTTAGGATGCATTGGAGATGGGCTTATGACTCCTCTTAATATGTTTATTCTT
AGTTCTCTTATTGATGATTATGGAGGTGCTGCTATTGATGATGATTCTTTCACTAATGCT
ATTGTGGACAAGTACTCACTCAGGTTGCTCTATGTTGCAATTGGAGTTGGTATATCTGCT
TGCATTGGGGGAATTTGCTGGACAAGAAGTGCAGAGAGACAAACAAGTCGAATAAGGATG
GAGTACTTAAAATCAGTGCTTAGACAAGAAGTTAGTTTCTTTGACAAGCAAGATGGTTCC
TCCAGTACTAGTTTTCAAGTTGTTTCCACAATCTCAGCTGATGCTCATTCAATCCAAGAT
GCTATAGCAGAGAAGATACCTAATTGTGTTGCTCATCTGTCAACGTTCATTTTTGGCTTA
ATTCTTGCTTTCTACCTGTCATGGAGACTAGCATTAGCTTCAGTTCCATTTTCACTTGGT
TTTGTTATACCTGGTGTAGCATTTGGGAAGCTACTTATGATCCAGGGAATGAAGATGAAG
GATGCCTATGGAGTTGCAGGGAGTGTAGCAGAACAAGCAATTTCATCGATTCGAACAGTT
TACTCTTATGTAGGGGAGAATGAAACACTAAAAAGATTCAGCATTGGTCTTGAGGAAAGT
TTGAATCTTGGTGTGAAACAAGGGCTTACTAAGGGATTGTTGTTAGGAAGTATGGGAATG
ATTTATGTGTCGTGGGCATTTCAATCATGGGCAGGGAGTGTACTTGTTTCTAATAGAGGA
GAAAGTGGTGGTCGCGTTTTCGTATCAGCTCTTTGTGTTGTTCTTGGAGGACTGTCTTGT
ATGAGTGCACTTCCAAATATCTCATTCATCGTTGAGGCAACAATTGCTGCTGCAAGAATT
TTTGAACTCATCGATCGTGTTCCTCAAATAGATTCTGAAGATGGTAAAGGGAAAATTCTA
GCATATGTAAGAGGAGATATTGAGTTCAAGGACGTAACTTTCAGTTATCCATCAAGATCA
GATATTCAGGTCCTCCAAGATTTTAGTCTTAAAGTGAAAGCTGGAAAGACAGTAGCAATT
GTGGGAGGCAGTGGTTCCGGAAAGTCCACTGTCATTTCTTTGCTAGAAAGATTTTATGAT
CCTATCAAAGGTGATATCTTACTTGATGGACATAAAATAAAGAGACTGCAACTTAAATGG
TTGAGATCTCAGATGGGGCTTGTAAATCAGGAGCCTGTTCTGTTTGCTACATCCATCAAG
GAAAATATACTCTTCGGAAAAGAAGGAGCTTCGATGAAAATGGTTGTTGAAGCTGCTAAG
GCTGCAAATGCACATGAATTTGTAGCCTCTTTACCGGATGGATATGATACTCATGTGGGA
CAATTTGGTTTTCAATTGTCTGGAGGACAGAAGCAAAGGATTGCTATAGCTAGGGCGTTG
ATTAAGGACCCGAAAATTCTTTTACTCGATGAAGCTACAAGCGCGCTGGATGCACAATCA
GAAAGAATTGTTCAAGAGGCTCTAGACCTGGCTTCACAAGGAAGGACAACAATCATCATT
GCTCATCGCCTCAGTACAATACGCAGGGCTGACAAAATTGTAGTTGTTGAGTCAGGGAGA
ATTGTTGAATCTGGTTCTCATGATGATCTAATGTGTAAGACTGATGAAGAAGGTGGAGTT
TACTTTAAAATGGTCAAATTGCAGCAATCAACAGCAAACAATGAAGGGCCATCTAGTCCG
TATCTTCCTAACGAGACAAGAAGCTACATGAGAAGGGGTTATAATATGCCTAGGTCCCCT
TATGTCGCTACGTCAAGTTGGCAAAATAGCCCTGCCTCTCCTTTTACCCCAGCAATAAGT
GTCAGTTATGCTCCCACCATTCATACATGCTCTTATTATGGTAGTGACGATGAGTATTTG
GAGAACTTCTCTCATCCAAGTCCCTCAACGTGGCGTTTGCTTCAAATGAATGCACCAGAG
TGGAAAATTGCTTTGTTGGGATGTTTAGGAGCTGTTACGTTTGGTGTACTTCAACCACTT
TATGCATTTTGCTTGGGATTAGTTGTATCAGCATATACATCAAATGATATTTCAAAGATA
AAGTCGGAGATCAAAATCTACAGCGTTGTCTTTTTGAGCATAGGTGTGACAAGTTTCATT
GCCAATCTACTCCAACATTACAATTTTGCTAAAATGGGAGAGAAACTGACCAAGAGAATC
AGGGAAAAGGTGCTTTCAAACTTGCTCACATTTGAAGTGGGCTGGTATGATCGAGACGAG
AACACTAGTGCAGCAGTTTGTGCAAGACTCTCCACTGAAGCCCGTATGGTTCGATCCCTT
GTAGGTGATCGTATGTCACTACTACTACAGGTTTCTGTCAGTGCTTCGACTGCTTTTGTG
CTTGCATTGATTGTCGCATGGAGAGTTGCTATTGTACTAATATCTATACAACCTTTACTC
ATAGCAAGCTTCTACTCGCGAAGTGTTCTGATGAAAAGAATGTCAGAAAGATCCCAAAAG
GCACAGAGTGAAGGAAGTCAGCTAGCAAGTGAAGCAGTAATCAATCACAGGACTATCACC
GCCTTCTCTTCTCAAGATCGAATGTTGGACCTCTTTTCTGAAACTCAGAAAGGACCGAGA
AAAGAAAATATTCGACAGTCATTGCTTTCTGGTGCTGGCTTGTTTTGCTCTCAGTTTCTA
ACCACAGCTGCCATTGCCTTAACATATTGGTATGGGGGAAGACTAATGAACAGAAAGCTA
CTAACTTCAAAGCACCTATTTCAAGTTTTCTTCCTTTTGATGAGTACCGGAAAAAATATA
GCAGATACAGGAAGTATGACTTCTGATTTGGCAAGAGGTAGCAGTGCAGTTGCATCTGTA
TTCGCTATCTTAGATCGAAAGACTGAGATTGAACCTGAGAACTCTGAAGGGATTAAAGTC
ATTAAGGTATTAAAAGGAAAGATAGAGCTGAAGAATGTCTTCTTTTACTATCCGTCGAGG
CCTGATCAAGCAATCTTCCAAGGAATGAATCTGAAAATTGAATCAGGAAAAACAGTAGCA
CTTGTCGGGCAAAGTGGTTCTGGAAAATCTACAATCATTGGCTTGATAGAAAGATTCTAT
GATCCAATAAAGGGACAGGTTCTAATTGATGACAGAGACATCAAAAGCTACAACTTGAAG
AGCTTAAGATCACAAATTGCTCTAGTGAGTCAAGAACCTACCCTTTTTGCAGGATCCATA
CGCGAAAATATCATTTATGGGAAAGAAGCAGCTACAGAGTCTGAAATCAAGAAAGCTGCC
ATTCGTGCTAACGCCCATGAATTTATAAGTGCTATGGAAGATGGTTATGAAACTTATTGT
GGTGAAAGAGGAGTCCAACTCTCAGGAGGGCAAAGGCAAAGAATAGCACTTGCACGAGCG
ATACTAAAGAATCCAACTATACTTCTCCTAGACGAGGCAACTAGCGCGCTTGACAGTGTA
TCTGAGAACTTAGTACAAGAAGCATTGGAGAAAATGATGATGAGTAGAACAAGTGTAGTT
GTAGCTCATCGATTATCAACGATACAGAAGGCAGACACCATAGCTGTGATTAAAAATGGA
AAGGTTGTGGAACAAGGATCACATTCTCAGCTGCTTGCCCTTGGAAAGAATGGCTCATAT
TATGGACTTATGAAGTTGCAATCTGGCCATTCTCCTTATAGGTGA