Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400027905
CDS Infomation

pacid=37442880 polypeptide=PGSC0003DMP400019007 locus=PGSC0003DMG400010741 ID=PGSC0003DMT400027905.v4.03 annot-version=v4.03
Sequence

ATGGTGAAACGACGTCGCGAAGAAATTGATTCCGATGGAGCAACGGAAACGGAAAATACG
ACGTCGTACAAAACGGTTTTCATAGATACCAACCTTGATACCCACTTGGCTGTAATTGTC
TCCGATTCCGATACTATCTCCGATCTTAAAAAAAAGCTCGTGTTTGAACACTTAAGGTGT
TTTCCTGAAATGAGTGAGTTGAAGATTTCTTCTGTGAAGGTGAAACGAAAACGACATTAC
TATCATCTGCCTGACACTATGCTTGTTAGAGGTGTTTTTGAGGGTAGCAAGAAGGAATGG
TTCCTTTCTGTTGATGCTTCTAGATTTCAATGCCTTGAAAATGACCAAGGGTTACTTTGC
ATAGCGTATCCGCAAATTGAAGCGGAAAATCTTCTCCCGTGTGATTCATTCAATGCAATG
GATAAGCAGAAGGTTTTTGATACTAGTGAATCTTACCCAGCTAATGGGAACTTGGCATCT
AGCTCCATCGTGAAACACAAGGAAGTTGCCAAGGTCATAGGTGAATTCAAGAGTGTGAAG
CGCGCGGGTAATTCACAAGAACTTTCTCCCAGATCTGGTCCTGTGGCTAAGAAGCGTAAA
ATAAAGCACAAAGAAGACAAAGTCAACCACCCGGTAACAGGTACCAGTGCTTCAAATCAT
GGCATAGATAATGGTTCTGAATTTAAAATTGTTGGAAATGATACTACTTTGACAAATTCT
AACGAAGGAGAGCGGGAAAATATAAACATGAAACTGGTAGATGTCAGTGCTGAACCCTTA
ATAAACCAACGTTCTGATCCCAGTAAGGTGTCAAAATTGGGAATGAAGAAAAGCAGGAAG
GGTGGGGCAAGTGCTGAAATCCTTGGTGTGCAGGATGAGCTATGTGGAGATCGGAACAAT
GATGCACTTGGTGAAACATCACACTCTGGGACTCTTGCAAATAAAGTTAAAATTTTGGGT
AGCAAGGAAAGCAGTGGAGCTTCCACCGAGTTCAATCATAGGGATAGCTTGAAGATCGCA
ATTCCAGAGAACTCCACAGCAGGTAAACCAATAAAGGCAGCTTTAGCAGAAGAAACATTA
GGGGACCAATCTGTGAGAACAAATACAACCCATAAGAAGAGGAAGAAGAAAATTAAGAAG
GGGAAGGACTCATCCACGTGCCATGATGAGGTTGCATGCATGGCTCTGGGTTCCAATGAT
AAATTTGTGGGAACTAGGGGATTAGAGCAAAAGGAAGGAGTTGAAATGAAGATCTTTGAC
AAGTTGACTGATGTTGACTCTACTATTCATGCTACTCAATCTAGACGGAAAGAAACATCT
CTTGTTAAAGATCATGCATCAAACAAAGAGCGTCCAGCACCAGTCAGCAAGGGTATTTGT
GAAATGAATTTAGTTGGCCAACCTATTCTTGAATCCAATGACTCTGGAGACAATGAACTT
GGAATTGATGTTGCTAACACAACTGGAGAACAGGAGGTGATACCGAACTGTGATTTTGAA
ATGCCCATGAGTGAAACGTTGAGCGATCCAAGTACCAGGGGTCCAATGCCTTCCTACCAG
TTGGGAGAATTACAAGGAGCAGCAGAAAATAGCTTTGGGAGGAAGAGAAGCAGGGCCAAG
AAGTCAACTTCTCATCAGGAGTTAGATATGAAAAATATTGTTGGGGCTTCTCAAAATGCT
TATGCATCTGACCAAGATATAGTCCGTAATGATGGTTCAAGTGATGCAACAACAAAGGTT
GGTAGTATGCCAAAAACTGATGTGGATCATATAAATGAAATAGGGATCGAAGGCAAGTTG
TCAGTTACTCTAGGTGCTGAGACATCCCCTCTTTTAGATAACAATGAACCAACTGGGGAT
ACTAAAGAACAAGTTCTCTCAGCAAAAAGGGCATTGGATGACAAGGAGAACATTGAATCT
GGAAATGCTAGCAGCATGAAGCGAAAGAAAAAGAGTTGGAGGAAATCTGCTGAAAAGATT
CTTGTTAAATTAAACGGAGAGGATGACAGTATGGTGAACTGCCCCTCTTTAGCTGAAGGG
ATTGGATATACAACTGATCCTGTAACTGGGCAGAGTAAGAAAGGTGAAATTTCGTTTGAT
GCTGAAGTGCTGCAGATTAGTCTAAATACAGAGGTGAAAGGGTCGCCTCAAGTTCAATCT
GCAGCATGTAGATCTTCGGATACTTCCAAGGCAGAAATGAACATCAAGGAAGTGGAAACT
ATCTCGACAGCTCCCTCTGATGTGAAGGTTGCTGAAGGACATGGAACCTCTGGTCTACGT
AAAAACAAAAAAACAAAAATGGAGGTTTCCACTCATATTAATGATGTTTCATGTGCCCCT
TCAGCGACGCATGATACTTCTGTTAATCATTTCGTTGAAGGGTCTAATCAAGGTAAAAAT
GCATTGCCTGCCAGCAAAAGAAAGGGAGCATCAGAACAAGTGTCAAAGAGTACCTATGTT
GTAGGTTCTCAACACCAAGTTGAGAAGGCAACCTGCATTGAGCCAGAGCTTCTGCCCGTT
GAGGAGAAGGGAAATGAGGTTGAGCATTTGCGGCTTAACCAGACTGATAAAAATCAGGAG
ACTCTGAGCATTTCAGAAAAGAGGCTGAAAACGAAAACCAAAAAGAGCCAAAGTTCTAAG
AAGAGCAAATCCATTTTGTCTAGTCAAGATCAGGAAGGCAGTCACAAAGACTTAAAAGCT
TCAAATGATAATCTGGAAGATGTGAACCCTCTGCCAGAGCCAATGGAGATGGATGAGTCA
GGTAAAAATATTCATGTTGATCAGTATGGTGGTAACAAGTTGGAAAATCAGAGAAATTCT
GGTATTCATTCTGACTTCGAGAGTTCTAGGGAATATATCAGAAATGCTGACTCGTTTCCA
GTGCCATCACATTCTTTAACTAAGGGTGCATTAGAGGAGATGCACGAACCTGATGTAAAT
ACTGATAAGAGCGACACCATAAACTTCAAGCAATATTTTGTTCCTGGCCAACAAGGAGAA
GTTACATCAAAGAAACCAATGAAACCAAACAGAGACACAAAAGCTAGCAGAAAATCTAAG
GGCGGTATGACTTCTAGAGGATTTTCGGAAGATATCTCGAAATCAAGAATTGAGGTGGCA
CTTCCGAGTCAGGGAGATAAAACACTCGAAGAAGCTGGAAAGCTTGCAACTTATGATGCT
CCTGCTTACAAGAAGAAAAATGAAGAATCTATGGACGAATCTAGGTCCAGCTCCAGCTCA
AAAGGTCCTGGCAAATTCCTTGAGGACAATAGACGGCAAACAGGTTCAGAAATCCAAAGT
TTGTCTACCAGAAATACAAAAATTAGGACTGCAAGCATCGAGGATTTTACACAACTAAAG
AAAGGATTGCTTCCTAATCCAGGGCCTAAGTTTGGGGATAGTAGATCGAGAAGGTCCGAC
AGTAAAGAGGGTGGAGATTCTGATTCTACGACTGACACTCGATCGGATTCATCTTCTTCT
GGCAGCTCAGTTGAAGGAAGTGAAATAAGTCAGGCTTCAACTCCAGAAGGAGCTAATGTT
GCAAAAAATAATGTTGCTGCTGCTGGAAAGCATAAGCTCAAATCAAACTTTTTGGGTGAG
GCCCTAACCATGGAGATGATTCTGAGAAACTCTAGCCGTTTCAAGAAGGCTAAGGTTTCA
GCTGCTCAATCTCAAGATGAAGAAAGTCAGCCTGTTGATGTTGTCCCTGATAGTCTAGCA
GACACTTAG

Peptide Sequence

PEP ID

PGSC0003DMP400019007
PEP Infomation

pacid=37442880 transcript=PGSC0003DMT400027905 locus=PGSC0003DMG400010741 ID=PGSC0003DMT400027905.v4.03 annot-version=v4.03
Sequence

MVKRRREEIDSDGATETENTTSYKTVFIDTNLDTHLAVIVSDSDTISDLKKKLVFEHLRC
FPEMSELKISSVKVKRKRHYYHLPDTMLVRGVFEGSKKEWFLSVDASRFQCLENDQGLLC
IAYPQIEAENLLPCDSFNAMDKQKVFDTSESYPANGNLASSSIVKHKEVAKVIGEFKSVK
RAGNSQELSPRSGPVAKKRKIKHKEDKVNHPVTGTSASNHGIDNGSEFKIVGNDTTLTNS
NEGERENINMKLVDVSAEPLINQRSDPSKVSKLGMKKSRKGGASAEILGVQDELCGDRNN
DALGETSHSGTLANKVKILGSKESSGASTEFNHRDSLKIAIPENSTAGKPIKAALAEETL
GDQSVRTNTTHKKRKKKIKKGKDSSTCHDEVACMALGSNDKFVGTRGLEQKEGVEMKIFD
KLTDVDSTIHATQSRRKETSLVKDHASNKERPAPVSKGICEMNLVGQPILESNDSGDNEL
GIDVANTTGEQEVIPNCDFEMPMSETLSDPSTRGPMPSYQLGELQGAAENSFGRKRSRAK
KSTSHQELDMKNIVGASQNAYASDQDIVRNDGSSDATTKVGSMPKTDVDHINEIGIEGKL
SVTLGAETSPLLDNNEPTGDTKEQVLSAKRALDDKENIESGNASSMKRKKKSWRKSAEKI
LVKLNGEDDSMVNCPSLAEGIGYTTDPVTGQSKKGEISFDAEVLQISLNTEVKGSPQVQS
AACRSSDTSKAEMNIKEVETISTAPSDVKVAEGHGTSGLRKNKKTKMEVSTHINDVSCAP
SATHDTSVNHFVEGSNQGKNALPASKRKGASEQVSKSTYVVGSQHQVEKATCIEPELLPV
EEKGNEVEHLRLNQTDKNQETLSISEKRLKTKTKKSQSSKKSKSILSSQDQEGSHKDLKA
SNDNLEDVNPLPEPMEMDESGKNIHVDQYGGNKLENQRNSGIHSDFESSREYIRNADSFP
VPSHSLTKGALEEMHEPDVNTDKSDTINFKQYFVPGQQGEVTSKKPMKPNRDTKASRKSK
GGMTSRGFSEDISKSRIEVALPSQGDKTLEEAGKLATYDAPAYKKKNEESMDESRSSSSS
KGPGKFLEDNRRQTGSEIQSLSTRNTKIRTASIEDFTQLKKGLLPNPGPKFGDSRSRRSD
SKEGGDSDSTTDTRSDSSSSGSSVEGSEISQASTPEGANVAKNNVAAAGKHKLKSNFLGE
ALTMEMILRNSSRFKKAKVSAAQSQDEESQPVDVVPDSLADT*

Transcript Sequence

Transcript ID

PGSC0003DMT400027905
Transcript Infomation

pacid=37442880 locus=PGSC0003DMG400010741 ID=PGSC0003DMT400027905.v4.03 annot-version=v4.03
Sequence

ATGGTGAAACGACGTCGCGAAGAAATTGATTCCGATGGAGCAACGGAAACGGAAAATACG
ACGTCGTACAAAACGGTTTTCATAGATACCAACCTTGATACCCACTTGGCTGTAATTGTC
TCCGATTCCGATACTATCTCCGATCTTAAAAAAAAGCTCGTGTTTGAACACTTAAGGTGT
TTTCCTGAAATGAGTGAGTTGAAGATTTCTTCTGTGAAGGTGAAACGAAAACGACATTAC
TATCATCTGCCTGACACTATGCTTGTTAGAGGTGTTTTTGAGGGTAGCAAGAAGGAATGG
TTCCTTTCTGTTGATGCTTCTAGATTTCAATGCCTTGAAAATGACCAAGGGTTACTTTGC
ATAGCGTATCCGCAAATTGAAGCGGAAAATCTTCTCCCGTGTGATTCATTCAATGCAATG
GATAAGCAGAAGGTTTTTGATACTAGTGAATCTTACCCAGCTAATGGGAACTTGGCATCT
AGCTCCATCGTGAAACACAAGGAAGTTGCCAAGGTCATAGGTGAATTCAAGAGTGTGAAG
CGCGCGGGTAATTCACAAGAACTTTCTCCCAGATCTGGTCCTGTGGCTAAGAAGCGTAAA
ATAAAGCACAAAGAAGACAAAGTCAACCACCCGGTAACAGGTACCAGTGCTTCAAATCAT
GGCATAGATAATGGTTCTGAATTTAAAATTGTTGGAAATGATACTACTTTGACAAATTCT
AACGAAGGAGAGCGGGAAAATATAAACATGAAACTGGTAGATGTCAGTGCTGAACCCTTA
ATAAACCAACGTTCTGATCCCAGTAAGGTGTCAAAATTGGGAATGAAGAAAAGCAGGAAG
GGTGGGGCAAGTGCTGAAATCCTTGGTGTGCAGGATGAGCTATGTGGAGATCGGAACAAT
GATGCACTTGGTGAAACATCACACTCTGGGACTCTTGCAAATAAAGTTAAAATTTTGGGT
AGCAAGGAAAGCAGTGGAGCTTCCACCGAGTTCAATCATAGGGATAGCTTGAAGATCGCA
ATTCCAGAGAACTCCACAGCAGGTAAACCAATAAAGGCAGCTTTAGCAGAAGAAACATTA
GGGGACCAATCTGTGAGAACAAATACAACCCATAAGAAGAGGAAGAAGAAAATTAAGAAG
GGGAAGGACTCATCCACGTGCCATGATGAGGTTGCATGCATGGCTCTGGGTTCCAATGAT
AAATTTGTGGGAACTAGGGGATTAGAGCAAAAGGAAGGAGTTGAAATGAAGATCTTTGAC
AAGTTGACTGATGTTGACTCTACTATTCATGCTACTCAATCTAGACGGAAAGAAACATCT
CTTGTTAAAGATCATGCATCAAACAAAGAGCGTCCAGCACCAGTCAGCAAGGGTATTTGT
GAAATGAATTTAGTTGGCCAACCTATTCTTGAATCCAATGACTCTGGAGACAATGAACTT
GGAATTGATGTTGCTAACACAACTGGAGAACAGGAGGTGATACCGAACTGTGATTTTGAA
ATGCCCATGAGTGAAACGTTGAGCGATCCAAGTACCAGGGGTCCAATGCCTTCCTACCAG
TTGGGAGAATTACAAGGAGCAGCAGAAAATAGCTTTGGGAGGAAGAGAAGCAGGGCCAAG
AAGTCAACTTCTCATCAGGAGTTAGATATGAAAAATATTGTTGGGGCTTCTCAAAATGCT
TATGCATCTGACCAAGATATAGTCCGTAATGATGGTTCAAGTGATGCAACAACAAAGGTT
GGTAGTATGCCAAAAACTGATGTGGATCATATAAATGAAATAGGGATCGAAGGCAAGTTG
TCAGTTACTCTAGGTGCTGAGACATCCCCTCTTTTAGATAACAATGAACCAACTGGGGAT
ACTAAAGAACAAGTTCTCTCAGCAAAAAGGGCATTGGATGACAAGGAGAACATTGAATCT
GGAAATGCTAGCAGCATGAAGCGAAAGAAAAAGAGTTGGAGGAAATCTGCTGAAAAGATT
CTTGTTAAATTAAACGGAGAGGATGACAGTATGGTGAACTGCCCCTCTTTAGCTGAAGGG
ATTGGATATACAACTGATCCTGTAACTGGGCAGAGTAAGAAAGGTGAAATTTCGTTTGAT
GCTGAAGTGCTGCAGATTAGTCTAAATACAGAGGTGAAAGGGTCGCCTCAAGTTCAATCT
GCAGCATGTAGATCTTCGGATACTTCCAAGGCAGAAATGAACATCAAGGAAGTGGAAACT
ATCTCGACAGCTCCCTCTGATGTGAAGGTTGCTGAAGGACATGGAACCTCTGGTCTACGT
AAAAACAAAAAAACAAAAATGGAGGTTTCCACTCATATTAATGATGTTTCATGTGCCCCT
TCAGCGACGCATGATACTTCTGTTAATCATTTCGTTGAAGGGTCTAATCAAGGTAAAAAT
GCATTGCCTGCCAGCAAAAGAAAGGGAGCATCAGAACAAGTGTCAAAGAGTACCTATGTT
GTAGGTTCTCAACACCAAGTTGAGAAGGCAACCTGCATTGAGCCAGAGCTTCTGCCCGTT
GAGGAGAAGGGAAATGAGGTTGAGCATTTGCGGCTTAACCAGACTGATAAAAATCAGGAG
ACTCTGAGCATTTCAGAAAAGAGGCTGAAAACGAAAACCAAAAAGAGCCAAAGTTCTAAG
AAGAGCAAATCCATTTTGTCTAGTCAAGATCAGGAAGGCAGTCACAAAGACTTAAAAGCT
TCAAATGATAATCTGGAAGATGTGAACCCTCTGCCAGAGCCAATGGAGATGGATGAGTCA
GGTAAAAATATTCATGTTGATCAGTATGGTGGTAACAAGTTGGAAAATCAGAGAAATTCT
GGTATTCATTCTGACTTCGAGAGTTCTAGGGAATATATCAGAAATGCTGACTCGTTTCCA
GTGCCATCACATTCTTTAACTAAGGGTGCATTAGAGGAGATGCACGAACCTGATGTAAAT
ACTGATAAGAGCGACACCATAAACTTCAAGCAATATTTTGTTCCTGGCCAACAAGGAGAA
GTTACATCAAAGAAACCAATGAAACCAAACAGAGACACAAAAGCTAGCAGAAAATCTAAG
GGCGGTATGACTTCTAGAGGATTTTCGGAAGATATCTCGAAATCAAGAATTGAGGTGGCA
CTTCCGAGTCAGGGAGATAAAACACTCGAAGAAGCTGGAAAGCTTGCAACTTATGATGCT
CCTGCTTACAAGAAGAAAAATGAAGAATCTATGGACGAATCTAGGTCCAGCTCCAGCTCA
AAAGGTCCTGGCAAATTCCTTGAGGACAATAGACGGCAAACAGGTTCAGAAATCCAAAGT
TTGTCTACCAGAAATACAAAAATTAGGACTGCAAGCATCGAGGATTTTACACAACTAAAG
AAAGGATTGCTTCCTAATCCAGGGCCTAAGTTTGGGGATAGTAGATCGAGAAGGTCCGAC
AGTAAAGAGGGTGGAGATTCTGATTCTACGACTGACACTCGATCGGATTCATCTTCTTCT
GGCAGCTCAGTTGAAGGAAGTGAAATAAGTCAGGCTTCAACTCCAGAAGGAGCTAATGTT
GCAAAAAATAATGTTGCTGCTGCTGGAAAGCATAAGCTCAAATCAAACTTTTTGGGTGAG
GCCCTAACCATGGAGATGATTCTGAGAAACTCTAGCCGTTTCAAGAAGGCTAAGGTTTCA
GCTGCTCAATCTCAAGATGAAGAAAGTCAGCCTGTTGATGTTGTCCCTGATAGTCTAGCA
GACACTTAG