Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400027904
CDS Infomation

pacid=37442259 polypeptide=PGSC0003DMP400019006 locus=PGSC0003DMG400010740 ID=PGSC0003DMT400027904.v4.03 annot-version=v4.03
Sequence

ATGGCAACTTTGTTCCCTTCTCTTGGACCCAATTCAATATTATCTCCATTTGTAGACCGA
ACAAAAACCCTAAACCCAGTTTTCCATCGAACCCACTTTGGAAATCTTCCACTTAACAAA
CCCTTTTCAAGGGGTATGCTTGGAGTAGCTCGATTCGGGTTGGGGCAGGATCCATTTCCT
GACCCGGAAACTGCAGAGTTGCTTTTCAAGGATTTGTTTACTCGGGCTGAAGGGTTTTTG
TATACAGTTGCTGATGCTGCTGTTTCAGGTTCTGCTGATACTGTTGTTGACACTACTGAA
AGTGTTAAACAAAATAGTGATTGGCTTTCTGGTATTACAAATGGAATGGAGACTGTTTTG
AAGGTTCTGAAGGACGGGCTCTCAACTTTACATGTGCCATATTCTTATGGTTTCGCAATC
ATTCTACTAACAATACTAGTAAAAGCTGCAACTTTTCCTCTAACCAAAAAACAGGTAGAA
TCATCACTGGCAATGCGATCTATGGCACCACAAATAAAGGCTATTCAGGAGCGATATGCT
GGAGACCAGGAGAGGATTCAACTTGAAACTGCTCGACTTTATAAACTAGCTGGCGTGAAT
CCACTGGCAGGATGTCTGCCGACTCTTGCCACTATACCTATATGGATTGGTCTTTACAGA
GTCCTCTCAAATGTGGCAAATGAGGGACTCCTGACAGAAGGCTTCTTCTGGATACCCTCG
CTAGCTGGTCCAACAACAGTTGCTGCCCGTCAAACTGGAAGTGGCACCTCTTGGCTTTTC
CCTTTTGTAGATGGTCATCCTCCGCTTGGTTGGTCCGATACTTTTGCATATCTTGTCTTG
CCTGTATTGTTGGTCGTCTCCCAGTACATCTCTATTCAAATCATGCAACCATCTCAACAG
AGTGATGATCCAAATGTGAAGAACTCTCAAGCGATAACTAAGTTTCTCCCTCTAATGCTT
GGTTATTTTTCACTGTCAGTTCCTTCTGGTCTGAGCCTATATTGGTTAACAAACAACATA
CTTAGCACCGGCCAACAAGTATGGCTTCAGAAGTTTGGAGGTGCAAAAGTTCCAACCTTG
AAATTAAGTGATGATACACCTAGGAAAGAACAACCTCAAATTCAGAAGTTAGTCTCTGAA
GCAACAATCGCTAAGAAGAAAGATGGAAATCTTACTTCAGATAAGTCCCGCCAGGGTGAA
AGGTTTAAACAGTTAAAGGAACAAGAAGCAAGAAAACGACAACAGAGGGAGGAGGAGAAG
AGGAGAGCAGAGGTAGCAGTTAATAGGAAAGAGGACAAGTCAGTTGAGATAGTTACTAGG
AATGAAACTGACTCTACTAATGGTGATTCTACATCTCTGAGTCACAACGCTTCCACTTCT
GAAAATTATCGCGTTGTAAATGGTGATAGTATTTCTTCGGAAGTGAAGGAAGTCGAAAGA
AGTCAGACTGGTAAAATTTCAGATGATCACAGCCATGTAGAGGATCAGCATGTTTCTGAC
AGAATGAAGAAGGGCGAGACTGTTACTTCTACCAGAGCTACAGATAACAAACTTCCACTT
GAAGACGCACAAGAAGACAGAAGCGAGTAA

Peptide Sequence

PEP ID

PGSC0003DMP400019006
PEP Infomation

pacid=37442259 transcript=PGSC0003DMT400027904 locus=PGSC0003DMG400010740 ID=PGSC0003DMT400027904.v4.03 annot-version=v4.03
Sequence

MATLFPSLGPNSILSPFVDRTKTLNPVFHRTHFGNLPLNKPFSRGMLGVARFGLGQDPFP
DPETAELLFKDLFTRAEGFLYTVADAAVSGSADTVVDTTESVKQNSDWLSGITNGMETVL
KVLKDGLSTLHVPYSYGFAIILLTILVKAATFPLTKKQVESSLAMRSMAPQIKAIQERYA
GDQERIQLETARLYKLAGVNPLAGCLPTLATIPIWIGLYRVLSNVANEGLLTEGFFWIPS
LAGPTTVAARQTGSGTSWLFPFVDGHPPLGWSDTFAYLVLPVLLVVSQYISIQIMQPSQQ
SDDPNVKNSQAITKFLPLMLGYFSLSVPSGLSLYWLTNNILSTGQQVWLQKFGGAKVPTL
KLSDDTPRKEQPQIQKLVSEATIAKKKDGNLTSDKSRQGERFKQLKEQEARKRQQREEEK
RRAEVAVNRKEDKSVEIVTRNETDSTNGDSTSLSHNASTSENYRVVNGDSISSEVKEVER
SQTGKISDDHSHVEDQHVSDRMKKGETVTSTRATDNKLPLEDAQEDRSE*

Transcript Sequence

Transcript ID

PGSC0003DMT400027904
Transcript Infomation

pacid=37442259 locus=PGSC0003DMG400010740 ID=PGSC0003DMT400027904.v4.03 annot-version=v4.03
Sequence

ATGGCAACTTTGTTCCCTTCTCTTGGACCCAATTCAATATTATCTCCATTTGTAGACCGA
ACAAAAACCCTAAACCCAGTTTTCCATCGAACCCACTTTGGAAATCTTCCACTTAACAAA
CCCTTTTCAAGGGGTATGCTTGGAGTAGCTCGATTCGGGTTGGGGCAGGATCCATTTCCT
GACCCGGAAACTGCAGAGTTGCTTTTCAAGGATTTGTTTACTCGGGCTGAAGGGTTTTTG
TATACAGTTGCTGATGCTGCTGTTTCAGGTTCTGCTGATACTGTTGTTGACACTACTGAA
AGTGTTAAACAAAATAGTGATTGGCTTTCTGGTATTACAAATGGAATGGAGACTGTTTTG
AAGGTTCTGAAGGACGGGCTCTCAACTTTACATGTGCCATATTCTTATGGTTTCGCAATC
ATTCTACTAACAATACTAGTAAAAGCTGCAACTTTTCCTCTAACCAAAAAACAGGTAGAA
TCATCACTGGCAATGCGATCTATGGCACCACAAATAAAGGCTATTCAGGAGCGATATGCT
GGAGACCAGGAGAGGATTCAACTTGAAACTGCTCGACTTTATAAACTAGCTGGCGTGAAT
CCACTGGCAGGATGTCTGCCGACTCTTGCCACTATACCTATATGGATTGGTCTTTACAGA
GTCCTCTCAAATGTGGCAAATGAGGGACTCCTGACAGAAGGCTTCTTCTGGATACCCTCG
CTAGCTGGTCCAACAACAGTTGCTGCCCGTCAAACTGGAAGTGGCACCTCTTGGCTTTTC
CCTTTTGTAGATGGTCATCCTCCGCTTGGTTGGTCCGATACTTTTGCATATCTTGTCTTG
CCTGTATTGTTGGTCGTCTCCCAGTACATCTCTATTCAAATCATGCAACCATCTCAACAG
AGTGATGATCCAAATGTGAAGAACTCTCAAGCGATAACTAAGTTTCTCCCTCTAATGCTT
GGTTATTTTTCACTGTCAGTTCCTTCTGGTCTGAGCCTATATTGGTTAACAAACAACATA
CTTAGCACCGGCCAACAAGTATGGCTTCAGAAGTTTGGAGGTGCAAAAGTTCCAACCTTG
AAATTAAGTGATGATACACCTAGGAAAGAACAACCTCAAATTCAGAAGTTAGTCTCTGAA
GCAACAATCGCTAAGAAGAAAGATGGAAATCTTACTTCAGATAAGTCCCGCCAGGGTGAA
AGGTTTAAACAGTTAAAGGAACAAGAAGCAAGAAAACGACAACAGAGGGAGGAGGAGAAG
AGGAGAGCAGAGGTAGCAGTTAATAGGAAAGAGGACAAGTCAGTTGAGATAGTTACTAGG
AATGAAACTGACTCTACTAATGGTGATTCTACATCTCTGAGTCACAACGCTTCCACTTCT
GAAAATTATCGCGTTGTAAATGGTGATAGTATTTCTTCGGAAGTGAAGGAAGTCGAAAGA
AGTCAGACTGGTAAAATTTCAGATGATCACAGCCATGTAGAGGATCAGCATGTTTCTGAC
AGAATGAAGAAGGGCGAGACTGTTACTTCTACCAGAGCTACAGATAACAAACTTCCACTT
GAAGACGCACAAGAAGACAGAAGCGAGTAA