Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400027828
CDS Infomation

pacid=37431473 polypeptide=PGSC0003DMP400018948 locus=PGSC0003DMG400010713 ID=PGSC0003DMT400027828.v4.03 annot-version=v4.03
Sequence

ATGGAAATTTCTTCTTTCCTATTTCCCAATCAGGAAGATTATCCTTCTCCTAATTTCTTC
AGTTTTTTTCAAGATTTTGACTTCCCTGCTACTACTGATACTACTGCTGCTGCTGCTGCT
CCGATTGCTGCTGAACCGCTTCCTAAGAAGCGAAGAGTTGATGATTTTGATTTTGATTTG
GAACAAGTTGTTGAACAGGGCTCTTTGAAGAGTGTTGAGGATATTTTGAACAAATTTTTG
GGATTCGATAAGGAAGAAGACAAAACGGAGCTTAAATTGGATTGGTCATCTCAGGAGCAA
TTTGCAAATCAATCTGTTTTTGACTTTTCGAATCAACAATCCGGGTTAATAATGAATGAG
AAAGTGAAGCCAATGGCGGGTACTAATAACAAAAGGTCTCGTCAGAATTCTGCTGAATTC
ATTCCAACTTCGGAGGAGGAATCTCAGCCTCAACAGCAAAGGAGGTTATGGGTGAAAGAC
AGGTCTAAAGCGTGGTGGGAGCAGTGTAATAGCCCCGATTTTCCAGAAGAGGAGTTTAAG
AAAGCGTTTAGGATGACCAGAGCAACTTTTGATATGATCTGTGAAGAATTGGAATCTGTA
GTCACTAAAAAGGACACAATGCTTCGTCAAGCGATTCCAGTTCGCCAACGTGTTGCTGTC
TGCATTTGGAGATTGGCTACAGGGGAGCCACTTCGTGAAGTTTCAAAGCGTTTTGGCCTA
GGAATATCTACTTGTCATAAGCTTGTTCTAGAGGTTTGCACCGCGATTAAAGGCGTTCTG
ATGCCGAAATTCGTGCAATGGCCTAATGATGATTACAAGATGAACGAGATCAAACATGAA
TTCCAGATGTTATCCGGGATGCCAAATGTAGGTGGATCTATTTACACAACACATGTTCCA
ATAATTGCCCCAAAAGTAAGTGTAGCTGCTTATTTCAACAAAAGGCATACAGAGAGGAAT
CAGAAAACTTCATACTCCGTTACAGTTCAAGGTGTTGTTGATCCAAAAGGGGTTTTCACA
GATGTTTGTATCGGTTGGCCTGGTTCGATGTCTGATGACAAAGTATTGGAAAAATCAGCT
TTGTATCAGAGAGCAAACAGGGGACAGCTGAAGGATACTTGGGTTGTAGGAAATTCAGGA
TATCCATTAATGGATTGGGTATTAGCTCCTTACACACGCCAAAATCTTACTTGGACTCAA
CATGCTTTCAATGAAAAAGTAGGGGAAGTCCAGAAGGTTGCTAAAGAGGCGTTTATGCGA
ATGAAAGCAAGGTGGAGCTGCTTACGAAAGAGAACAGAAGTGAAGCTTCAAGATTTGCCT
GTGGTTTTGGGGGCCTGCTGTGTATTGCATAATATTTGCGAGATGAGAGGTGAACAACTG
AATCCAGAACTCAGATTTGATCTTTTCGATGATGAAATGGTTCCAGAAAATATAGTAAGG
TCAATGAATGCTGTGCAAGCTAGGGATCAGATTGCTCACCAACTCTTGCATCAAAATCAT
GCAGGCACCAATTTCCTTTAA

Peptide Sequence

PEP ID

PGSC0003DMP400018948
PEP Infomation

pacid=37431473 transcript=PGSC0003DMT400027828 locus=PGSC0003DMG400010713 ID=PGSC0003DMT400027828.v4.03 annot-version=v4.03
Sequence

MEISSFLFPNQEDYPSPNFFSFFQDFDFPATTDTTAAAAAPIAAEPLPKKRRVDDFDFDL
EQVVEQGSLKSVEDILNKFLGFDKEEDKTELKLDWSSQEQFANQSVFDFSNQQSGLIMNE
KVKPMAGTNNKRSRQNSAEFIPTSEEESQPQQQRRLWVKDRSKAWWEQCNSPDFPEEEFK
KAFRMTRATFDMICEELESVVTKKDTMLRQAIPVRQRVAVCIWRLATGEPLREVSKRFGL
GISTCHKLVLEVCTAIKGVLMPKFVQWPNDDYKMNEIKHEFQMLSGMPNVGGSIYTTHVP
IIAPKVSVAAYFNKRHTERNQKTSYSVTVQGVVDPKGVFTDVCIGWPGSMSDDKVLEKSA
LYQRANRGQLKDTWVVGNSGYPLMDWVLAPYTRQNLTWTQHAFNEKVGEVQKVAKEAFMR
MKARWSCLRKRTEVKLQDLPVVLGACCVLHNICEMRGEQLNPELRFDLFDDEMVPENIVR
SMNAVQARDQIAHQLLHQNHAGTNFL*

Transcript Sequence

Transcript ID

PGSC0003DMT400027828
Transcript Infomation

pacid=37431473 locus=PGSC0003DMG400010713 ID=PGSC0003DMT400027828.v4.03 annot-version=v4.03
Sequence

ATGGAAATTTCTTCTTTCCTATTTCCCAATCAGGAAGATTATCCTTCTCCTAATTTCTTC
AGTTTTTTTCAAGATTTTGACTTCCCTGCTACTACTGATACTACTGCTGCTGCTGCTGCT
CCGATTGCTGCTGAACCGCTTCCTAAGAAGCGAAGAGTTGATGATTTTGATTTTGATTTG
GAACAAGTTGTTGAACAGGGCTCTTTGAAGAGTGTTGAGGATATTTTGAACAAATTTTTG
GGATTCGATAAGGAAGAAGACAAAACGGAGCTTAAATTGGATTGGTCATCTCAGGAGCAA
TTTGCAAATCAATCTGTTTTTGACTTTTCGAATCAACAATCCGGGTTAATAATGAATGAG
AAAGTGAAGCCAATGGCGGGTACTAATAACAAAAGGTCTCGTCAGAATTCTGCTGAATTC
ATTCCAACTTCGGAGGAGGAATCTCAGCCTCAACAGCAAAGGAGGTTATGGGTGAAAGAC
AGGTCTAAAGCGTGGTGGGAGCAGTGTAATAGCCCCGATTTTCCAGAAGAGGAGTTTAAG
AAAGCGTTTAGGATGACCAGAGCAACTTTTGATATGATCTGTGAAGAATTGGAATCTGTA
GTCACTAAAAAGGACACAATGCTTCGTCAAGCGATTCCAGTTCGCCAACGTGTTGCTGTC
TGCATTTGGAGATTGGCTACAGGGGAGCCACTTCGTGAAGTTTCAAAGCGTTTTGGCCTA
GGAATATCTACTTGTCATAAGCTTGTTCTAGAGGTTTGCACCGCGATTAAAGGCGTTCTG
ATGCCGAAATTCGTGCAATGGCCTAATGATGATTACAAGATGAACGAGATCAAACATGAA
TTCCAGATGTTATCCGGGATGCCAAATGTAGGTGGATCTATTTACACAACACATGTTCCA
ATAATTGCCCCAAAAGTAAGTGTAGCTGCTTATTTCAACAAAAGGCATACAGAGAGGAAT
CAGAAAACTTCATACTCCGTTACAGTTCAAGGTGTTGTTGATCCAAAAGGGGTTTTCACA
GATGTTTGTATCGGTTGGCCTGGTTCGATGTCTGATGACAAAGTATTGGAAAAATCAGCT
TTGTATCAGAGAGCAAACAGGGGACAGCTGAAGGATACTTGGGTTGTAGGAAATTCAGGA
TATCCATTAATGGATTGGGTATTAGCTCCTTACACACGCCAAAATCTTACTTGGACTCAA
CATGCTTTCAATGAAAAAGTAGGGGAAGTCCAGAAGGTTGCTAAAGAGGCGTTTATGCGA
ATGAAAGCAAGGTGGAGCTGCTTACGAAAGAGAACAGAAGTGAAGCTTCAAGATTTGCCT
GTGGTTTTGGGGGCCTGCTGTGTATTGCATAATATTTGCGAGATGAGAGGTGAACAACTG
AATCCAGAACTCAGATTTGATCTTTTCGATGATGAAATGGTTCCAGAAAATATAGTAAGG
TCAATGAATGCTGTGCAAGCTAGGGATCAGATTGCTCACCAACTCTTGCATCAAAATCAT
GCAGGCACCAATTTCCTTTAA