Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400027823
CDS Infomation

pacid=37432026 polypeptide=PGSC0003DMP400018944 locus=PGSC0003DMG400010710 ID=PGSC0003DMT400027823.v4.03 annot-version=v4.03
Sequence

ATGAAGGTCGACGGGGATGGTCCGCCGTCAGCTGCGGCGGCGATGGTCAACGTTGCCGTG
GCAGTTAAGAGTGCCGAAGGGAGGGGTAGTCAACGAGCCGTCCGGTGGGCTATAGAGAAG
TTGTTGCCTAAAGCTCATCGGTTTTTCCTCATTCATGTCATGCCTACCGTCACCGCAATT
CCAACTCCCTCAGGAGAGAATATTCCAGTTAACGAGCTTGATGATAATGTGGTGGAAATG
TATATAGAGGATATGAGGGCTAACTGTGAAGAAATGTTTATCCCATTTAAGACTCTATGC
AAAAGAAAAAGTGTTGAAACTGTGGTGTTGGAAGGGGATAATCCTGCAACAGTGCTTCTA
AAATATGTAGCTCAGGCTGGGATTAATAGTCTAGTGTTGGGCTCTTCCTCTCCCAGTTAC
TTTGGCAGGAAACAGAAGGATGGAGATGTACCATCAGCTATCCTCAAGCATGCTCCTGAG
TCTTTTGATGTTTATGTGGTGTTATCAAATGGACTTGTTAAAAATTCTTTGAATCCCTTG
TTATCTACTGAGACTGAACTTCATACTATCAATCAACAAGAATCCATTGTGTCTTGTGCC
TCGATGGATTTTCATAGCAGAGCATCATCACTTGCAGACTTTACACATCTCAATCCTCCA
GCATTTTTACATGGGAACACTTCTAATCATATCAGTCCTCAGCAAAGATACATTCAAAAT
CTAGAAGAATCAGCAGCTGGTCTGGAGGCAGTCAAGAGTAGCCATTTTTCCACTTACTCA
GAACATTTAGACATTCAGGTTGAAATGGGAAGATTGCACTTAGAGTTGCGAAACACCATA
ACATTGTACAACCAAACATGTGAACATCTGATCCATGCCCAAAACAAGGTCCAATTACTT
TCCTTGAAATGCTGTGAAGAAACAAGAAGAGTGAATGCAGCCAAGAAAAGAGAAGAAAGC
CTAAGAAAAACAGCTGCTGAACTGAAGAAGAAACATGTAGAAATTGAGAAGGAGGTTGAG
ATAGCGAGAAAGTTGCTCGCTGAAGAAGCTTGTGAGAGGCAGATAGCAGAGTTGAAGGCT
CTCCAACAGTCCTTAGAAAAACAAAAAGTTGTCGATGCACTACTTTCATGTGATGGCAGG
TATAGGAGACTGACTAGAGAAGAGATTCAGGTGGCTACTGATTCTTTTTCCGAGTCTAAG
ATAATTGGTGAAGGAGGATATGGGAAAGTTTACAAAGGCAACCTTGATCATACCCCTGTT
GCCATCAAAGTTCTTCATCCGAACGCATCATTAAAGAAAGAGGAGTTCCTAAAAGAGGTT
GAGGTTCTAAGCCAGTTGCATCACCCACACATTGTTTTACTGCTCGGAGCCTCTCCAGGA
AATGGCTGCCTTGTTTATGAGTATATGGAAAATGGAAGCCTGGAAGATCACATTTTCCCA
GGAAAAAACAGACCTCTTCCCTGGTTTGTTCGATTCCGGATACTTTTTGAAGTGGCATGT
GCTCTTGCATTCTTGCACAACTCAAATCCTGATCCTATCGTTCATCGAGATCTAAAGCCA
GGAAACATATTGTTGGACAAAAATTACGTGAGTAAAATCGGAGATGTGGGTTTAGCAAAA
ATTATGTCAGATATTGTTCCAGAAAGTATTACTGAGTATAGGAACTCCATTCTTGCTGGC
ACCTTTGCTTACATGGATCCAGAGTATCTAAGAACTGGAACTCTGAGACCTAAGTCTGAT
CTGTATGCTTTTGGAATAATAACACTTCAAATATTGGCGGCTTGTCATCCTAATGGCCTT
ATTATGAAATTTGAAGAAGCTATAGACACTAATTCGCTCGCAGATGTACTTGATAAGTCA
GTTGTAGACTGGCCATTGATAGAAGCAGAGGAGCTATCTAAGATGGCTCTACAATGCTGT
AAGCTTAGATGCAGAGATAGACCAGATCTTGAGACTGAAGTTCTTCCACTTCTGAAAAAA
CTTTTCGAATTTGCAGAGATGCATGTCAGGGTACAGGGAAACCTTAGGACACCTAGCCAG
TACTTCTGTCCAATCCTTCAGGAAGTAATGGAAGAGCCACATATAGCAGCCGATGGCTTT
ACATATGAGCACAGAGCAATAAAGGCATGGGTTGACAGACATAACGTTTCACCTGTGACG
AAACATATATTACAGCACAAAATGCTTACCCCAAACCACACGTTACACCTTGCAATACAA
GATTGGAGGTCACGTTAA

Peptide Sequence

PEP ID

PGSC0003DMP400018944
PEP Infomation

pacid=37432026 transcript=PGSC0003DMT400027823 locus=PGSC0003DMG400010710 ID=PGSC0003DMT400027823.v4.03 annot-version=v4.03
Sequence

MKVDGDGPPSAAAAMVNVAVAVKSAEGRGSQRAVRWAIEKLLPKAHRFFLIHVMPTVTAI
PTPSGENIPVNELDDNVVEMYIEDMRANCEEMFIPFKTLCKRKSVETVVLEGDNPATVLL
KYVAQAGINSLVLGSSSPSYFGRKQKDGDVPSAILKHAPESFDVYVVLSNGLVKNSLNPL
LSTETELHTINQQESIVSCASMDFHSRASSLADFTHLNPPAFLHGNTSNHISPQQRYIQN
LEESAAGLEAVKSSHFSTYSEHLDIQVEMGRLHLELRNTITLYNQTCEHLIHAQNKVQLL
SLKCCEETRRVNAAKKREESLRKTAAELKKKHVEIEKEVEIARKLLAEEACERQIAELKA
LQQSLEKQKVVDALLSCDGRYRRLTREEIQVATDSFSESKIIGEGGYGKVYKGNLDHTPV
AIKVLHPNASLKKEEFLKEVEVLSQLHHPHIVLLLGASPGNGCLVYEYMENGSLEDHIFP
GKNRPLPWFVRFRILFEVACALAFLHNSNPDPIVHRDLKPGNILLDKNYVSKIGDVGLAK
IMSDIVPESITEYRNSILAGTFAYMDPEYLRTGTLRPKSDLYAFGIITLQILAACHPNGL
IMKFEEAIDTNSLADVLDKSVVDWPLIEAEELSKMALQCCKLRCRDRPDLETEVLPLLKK
LFEFAEMHVRVQGNLRTPSQYFCPILQEVMEEPHIAADGFTYEHRAIKAWVDRHNVSPVT
KHILQHKMLTPNHTLHLAIQDWRSR*

Transcript Sequence

Transcript ID

PGSC0003DMT400027823
Transcript Infomation

pacid=37432026 locus=PGSC0003DMG400010710 ID=PGSC0003DMT400027823.v4.03 annot-version=v4.03
Sequence

ATGAAGGTCGACGGGGATGGTCCGCCGTCAGCTGCGGCGGCGATGGTCAACGTTGCCGTG
GCAGTTAAGAGTGCCGAAGGGAGGGGTAGTCAACGAGCCGTCCGGTGGGCTATAGAGAAG
TTGTTGCCTAAAGCTCATCGGTTTTTCCTCATTCATGTCATGCCTACCGTCACCGCAATT
CCAACTCCCTCAGGAGAGAATATTCCAGTTAACGAGCTTGATGATAATGTGGTGGAAATG
TATATAGAGGATATGAGGGCTAACTGTGAAGAAATGTTTATCCCATTTAAGACTCTATGC
AAAAGAAAAAGTGTTGAAACTGTGGTGTTGGAAGGGGATAATCCTGCAACAGTGCTTCTA
AAATATGTAGCTCAGGCTGGGATTAATAGTCTAGTGTTGGGCTCTTCCTCTCCCAGTTAC
TTTGGCAGGAAACAGAAGGATGGAGATGTACCATCAGCTATCCTCAAGCATGCTCCTGAG
TCTTTTGATGTTTATGTGGTGTTATCAAATGGACTTGTTAAAAATTCTTTGAATCCCTTG
TTATCTACTGAGACTGAACTTCATACTATCAATCAACAAGAATCCATTGTGTCTTGTGCC
TCGATGGATTTTCATAGCAGAGCATCATCACTTGCAGACTTTACACATCTCAATCCTCCA
GCATTTTTACATGGGAACACTTCTAATCATATCAGTCCTCAGCAAAGATACATTCAAAAT
CTAGAAGAATCAGCAGCTGGTCTGGAGGCAGTCAAGAGTAGCCATTTTTCCACTTACTCA
GAACATTTAGACATTCAGGTTGAAATGGGAAGATTGCACTTAGAGTTGCGAAACACCATA
ACATTGTACAACCAAACATGTGAACATCTGATCCATGCCCAAAACAAGGTCCAATTACTT
TCCTTGAAATGCTGTGAAGAAACAAGAAGAGTGAATGCAGCCAAGAAAAGAGAAGAAAGC
CTAAGAAAAACAGCTGCTGAACTGAAGAAGAAACATGTAGAAATTGAGAAGGAGGTTGAG
ATAGCGAGAAAGTTGCTCGCTGAAGAAGCTTGTGAGAGGCAGATAGCAGAGTTGAAGGCT
CTCCAACAGTCCTTAGAAAAACAAAAAGTTGTCGATGCACTACTTTCATGTGATGGCAGG
TATAGGAGACTGACTAGAGAAGAGATTCAGGTGGCTACTGATTCTTTTTCCGAGTCTAAG
ATAATTGGTGAAGGAGGATATGGGAAAGTTTACAAAGGCAACCTTGATCATACCCCTGTT
GCCATCAAAGTTCTTCATCCGAACGCATCATTAAAGAAAGAGGAGTTCCTAAAAGAGGTT
GAGGTTCTAAGCCAGTTGCATCACCCACACATTGTTTTACTGCTCGGAGCCTCTCCAGGA
AATGGCTGCCTTGTTTATGAGTATATGGAAAATGGAAGCCTGGAAGATCACATTTTCCCA
GGAAAAAACAGACCTCTTCCCTGGTTTGTTCGATTCCGGATACTTTTTGAAGTGGCATGT
GCTCTTGCATTCTTGCACAACTCAAATCCTGATCCTATCGTTCATCGAGATCTAAAGCCA
GGAAACATATTGTTGGACAAAAATTACGTGAGTAAAATCGGAGATGTGGGTTTAGCAAAA
ATTATGTCAGATATTGTTCCAGAAAGTATTACTGAGTATAGGAACTCCATTCTTGCTGGC
ACCTTTGCTTACATGGATCCAGAGTATCTAAGAACTGGAACTCTGAGACCTAAGTCTGAT
CTGTATGCTTTTGGAATAATAACACTTCAAATATTGGCGGCTTGTCATCCTAATGGCCTT
ATTATGAAATTTGAAGAAGCTATAGACACTAATTCGCTCGCAGATGTACTTGATAAGTCA
GTTGTAGACTGGCCATTGATAGAAGCAGAGGAGCTATCTAAGATGGCTCTACAATGCTGT
AAGCTTAGATGCAGAGATAGACCAGATCTTGAGACTGAAGTTCTTCCACTTCTGAAAAAA
CTTTTCGAATTTGCAGAGATGCATGTCAGGGTACAGGGAAACCTTAGGACACCTAGCCAG
TACTTCTGTCCAATCCTTCAGGAAGTAATGGAAGAGCCACATATAGCAGCCGATGGCTTT
ACATATGAGCACAGAGCAATAAAGGCATGGGTTGACAGACATAACGTTTCACCTGTGACG
AAACATATATTACAGCACAAAATGCTTACCCCAAACCACACGTTACACCTTGCAATACAA
GATTGGAGGTCACGTTAA