Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400027815
CDS Infomation

pacid=37441137 polypeptide=PGSC0003DMP400018937 locus=PGSC0003DMG400010706 ID=PGSC0003DMT400027815.v4.03 annot-version=v4.03
Sequence

ATGGAAGAAAAAGAAGTTTCATGTAGAGAGGATGTTAAAAGCCCACTCTCCATATTTTTC
AGAGATATAAGATCAATTTTTAAATTGGACGAACTTGGACAAGAAATAGGAAGGATTGCC
CTACCTGCTGCACTAGCTTTAACAGCAGATCCAATTGCATCTCTAGTTGATACAGCATTT
ATTGGCCATATAGGTCCGATTGAACAGGCTGCTGTAGGAGTTTCAATTGCTGTATTCAAT
CAAGCATCTAAGATTGCAATATTTCCCCTGGTCAGCGTAACAACTTCTTTTGTCGCGGAG
GAAGATGCAATCTCAAACGAAGACATGCAAGATGATAAATGTATGGAGAAGAATGAAGGA
GATGATGCTGAAGCATTTGAAACCGATTCACCGTCAAAGAGTGAAAGCAAAAGCCTATTA
CCTAAAAATGATTCTACAGAGAGTATATGCAAGTCCGAAAAGATAGTTACGAGCTTTGAA
ATAGTGAAATCTAAGCCTGAAAAGAGACACATTCCATCCGCGTCATCTGCATTGATCATT
GGTGCTGTTCTTGGCATCATTCAAGCAGTATTTCTTATCGCCGGAGCAAAGCCTTTATTG
AAATTCATGGGAGTCAAACCTGGCTCACCTATGTCGAAACCAGCTCAAGATTACCTGAGA
TTGAGGTCACTTGGTGCACCGGCAGTTCTTCTCTCACTAGCTATGCAAGGGGTATTTCGA
GGATTTAAAGACACGAAAACTCCACTATTTGCTACTGTGGCTGGTGATTTGGCTAATATA
ATTTTGGACCCTATATTCATGTTCGTTTTCCATCTCGGTGTCAGAGGTGCTGCAATCGCT
CATGTAATTTCTCAGTACCTAATTTCAGTTATACTGTTTTTGAGACTATTGGAGAAGGTT
GATATCGTACCTCCTAGTCTCAAGTATCTTCAATTTGCTCGATTTCTTACGAATGGCTTC
CTGTTGTTAGTGAGGGTCATAGCGGCAACATTCTGCGTAACATTAGCTGCATCATTGGCT
GCAAGGTTAGGACCGACACAAATGGCTGCATTTCAGGTCTGCTTGCAGATTTGGCTAGCT
ACATCTCTTCTAGCTGATGGATTAGCTGTCGCTGGGCAGGCGATACTAGCAAGTGCATTT
GCTCAAAAGGACTTCAATAGGTGTACTGCAACAGCATCAAGGGTGTTACAGTTGGGAGTA
GTCCTAGGACTTGTACTAGCACTTGTTCTTGGAATTGGTTTACACTACGGAGCACGAGTA
TTTACAAAAGATGTCAATGTCCTGAACCTAATTGGCATTGGAATTCCGTTTGTTGCAGCA
ACTCAACCAATCAATTGCCTGGCTTTTGTCTTCGATGGTGTAAACTTTGGCGCGTCTGAC
TTTGCATATTCTGCATACTCGATGCTTACAGTGGCTCTTTTCAGCATTATATTCCTTCTT
ATTCTTTCATCAAATTATGGATATATCGGAATTTGGGTAGCTCTAACCATCTATATGAGC
TTAAGAGCTTTAGCTGGCTTCGGAAGGATAGGAACTGGGACAGGCCCTTGGAAGTTCCTC
CAGAGCTGA

Peptide Sequence

PEP ID

PGSC0003DMP400018937
PEP Infomation

pacid=37441137 transcript=PGSC0003DMT400027815 locus=PGSC0003DMG400010706 ID=PGSC0003DMT400027815.v4.03 annot-version=v4.03
Sequence

MEEKEVSCREDVKSPLSIFFRDIRSIFKLDELGQEIGRIALPAALALTADPIASLVDTAF
IGHIGPIEQAAVGVSIAVFNQASKIAIFPLVSVTTSFVAEEDAISNEDMQDDKCMEKNEG
DDAEAFETDSPSKSESKSLLPKNDSTESICKSEKIVTSFEIVKSKPEKRHIPSASSALII
GAVLGIIQAVFLIAGAKPLLKFMGVKPGSPMSKPAQDYLRLRSLGAPAVLLSLAMQGVFR
GFKDTKTPLFATVAGDLANIILDPIFMFVFHLGVRGAAIAHVISQYLISVILFLRLLEKV
DIVPPSLKYLQFARFLTNGFLLLVRVIAATFCVTLAASLAARLGPTQMAAFQVCLQIWLA
TSLLADGLAVAGQAILASAFAQKDFNRCTATASRVLQLGVVLGLVLALVLGIGLHYGARV
FTKDVNVLNLIGIGIPFVAATQPINCLAFVFDGVNFGASDFAYSAYSMLTVALFSIIFLL
ILSSNYGYIGIWVALTIYMSLRALAGFGRIGTGTGPWKFLQS*

Transcript Sequence

Transcript ID

PGSC0003DMT400027815
Transcript Infomation

pacid=37441137 locus=PGSC0003DMG400010706 ID=PGSC0003DMT400027815.v4.03 annot-version=v4.03
Sequence

ATGGAAGAAAAAGAAGTTTCATGTAGAGAGGATGTTAAAAGCCCACTCTCCATATTTTTC
AGAGATATAAGATCAATTTTTAAATTGGACGAACTTGGACAAGAAATAGGAAGGATTGCC
CTACCTGCTGCACTAGCTTTAACAGCAGATCCAATTGCATCTCTAGTTGATACAGCATTT
ATTGGCCATATAGGTCCGATTGAACAGGCTGCTGTAGGAGTTTCAATTGCTGTATTCAAT
CAAGCATCTAAGATTGCAATATTTCCCCTGGTCAGCGTAACAACTTCTTTTGTCGCGGAG
GAAGATGCAATCTCAAACGAAGACATGCAAGATGATAAATGTATGGAGAAGAATGAAGGA
GATGATGCTGAAGCATTTGAAACCGATTCACCGTCAAAGAGTGAAAGCAAAAGCCTATTA
CCTAAAAATGATTCTACAGAGAGTATATGCAAGTCCGAAAAGATAGTTACGAGCTTTGAA
ATAGTGAAATCTAAGCCTGAAAAGAGACACATTCCATCCGCGTCATCTGCATTGATCATT
GGTGCTGTTCTTGGCATCATTCAAGCAGTATTTCTTATCGCCGGAGCAAAGCCTTTATTG
AAATTCATGGGAGTCAAACCTGGCTCACCTATGTCGAAACCAGCTCAAGATTACCTGAGA
TTGAGGTCACTTGGTGCACCGGCAGTTCTTCTCTCACTAGCTATGCAAGGGGTATTTCGA
GGATTTAAAGACACGAAAACTCCACTATTTGCTACTGTGGCTGGTGATTTGGCTAATATA
ATTTTGGACCCTATATTCATGTTCGTTTTCCATCTCGGTGTCAGAGGTGCTGCAATCGCT
CATGTAATTTCTCAGTACCTAATTTCAGTTATACTGTTTTTGAGACTATTGGAGAAGGTT
GATATCGTACCTCCTAGTCTCAAGTATCTTCAATTTGCTCGATTTCTTACGAATGGCTTC
CTGTTGTTAGTGAGGGTCATAGCGGCAACATTCTGCGTAACATTAGCTGCATCATTGGCT
GCAAGGTTAGGACCGACACAAATGGCTGCATTTCAGGTCTGCTTGCAGATTTGGCTAGCT
ACATCTCTTCTAGCTGATGGATTAGCTGTCGCTGGGCAGGCGATACTAGCAAGTGCATTT
GCTCAAAAGGACTTCAATAGGTGTACTGCAACAGCATCAAGGGTGTTACAGTTGGGAGTA
GTCCTAGGACTTGTACTAGCACTTGTTCTTGGAATTGGTTTACACTACGGAGCACGAGTA
TTTACAAAAGATGTCAATGTCCTGAACCTAATTGGCATTGGAATTCCGTTTGTTGCAGCA
ACTCAACCAATCAATTGCCTGGCTTTTGTCTTCGATGGTGTAAACTTTGGCGCGTCTGAC
TTTGCATATTCTGCATACTCGATGCTTACAGTGGCTCTTTTCAGCATTATATTCCTTCTT
ATTCTTTCATCAAATTATGGATATATCGGAATTTGGGTAGCTCTAACCATCTATATGAGC
TTAAGAGCTTTAGCTGGCTTCGGAAGGATAGGAACTGGGACAGGCCCTTGGAAGTTCCTC
CAGAGCTGA