Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400027809
CDS Infomation

pacid=37439224 polypeptide=PGSC0003DMP400018934 locus=PGSC0003DMG400010704 ID=PGSC0003DMT400027809.v4.03 annot-version=v4.03
Sequence

ATGGGTAATTGCTGTGTGAAACCGGGTAAATCTGCTGAAAAAAAGAACAAAAAGAACAAC
AGCAAACCCAACCCTTTTTCAATTGATTATGGGGGTACTAAACATGCCTCTGGGAGTGGA
AACAAGCTAGTTGTATTAAAAGAGCCAACAAGGCAAAATATACATGATAAGTATGATTTG
GGTCGTGAGCTCGGAAGAGGAGAATTTGGGGTTACTTATCTATGTACTGACTTGGAAGGA
GGAGAGAAATATGCCTGCAAATCGATATCTAAGAAGAAGCTAAGGACTGCAGTGGATATT
GATGATGTTAGGAGAGAGGTTGAGATCATGAAACATTTGCCTGTGCATCCGAATATTGTG
ACCTTGAAGGATACTTATGAGGATGATAATGCAGTGCACATTGTTATGGAATTGTGTGAG
GGTGGGGAGTTGTTTGATCGAATCGTTGCTAGAGGCCACTATACAGAGAGGGCAGCTGCT
GGAATTTTGAAGACTGTCGTGGAAGTCGTTCAGATGTGTCACAGACATGGGGTAATGCAT
CGTGATCTCAAACCTGAGAATTTTCTTTTTGGTAACAAGAAAGAAACAGCTCCGCTGAAG
GCTATTGACTTTGGGTTGTCTGTTTTCTTTAAACCTGGGGAACACTTTAATGAGATAGTG
GGAAGTCCTTATTACATGGCTCCTGAGGTCCTAAAGCGCAACTATGGACCAGAGGTCGAT
GTCTGGAGTGCTGGAGTTATACTTTATATTCTTCTTTGTGGTGTTCCACCTTTCTGGGCA
GAGACTGAACAAGGAGTAGCCCAAGCGATTATTCGTTCTGTGATTGATTTCAAGAGGGAT
CCATGGCCTAAAGTTTCTGATAATGCAAAGGATCTTGTAAAGAAAATGCTTGATCCAGAT
CCAACTCGACGGCTCACAGCTCATCAAGTTCTTGAGCATCCCTGGTTACATAATATAAAG
AAAGCACCAAACGTCTCATTGGGTGAGACTGTAAAAGCAAGACTCAAGCAGTTTTCAGTA
ATGAACAAGCTCAAGAAAAAAGCCCTCGCGGTTATAGCTGAGTTTTTGTCTGCGGAGGAA
GTCGCTGGAATGAAGGAAGCATTTGAAATGATGGATACTGGAAAGAAGGGCAAGATAAAC
CTTGAAGAACTTAAAGATGGCTTGCAGAAGCTTGGCCATCAAATCCCTGATGCTGATCTT
CAGATTCTCATGGAAGCGGCTGACGTTGATGGAGATGGAAGTTTAAATTATCCAGAGTTT
GTTGCTGTATCTATTCATCTTAGAAAGATGGCCAATGATGAACACCTGCACAAAGCATTT
TCATTTTTTGACAAAAATCAGAGTGGTTACATAGAAATCGAAGAGCTTCGTAGTGCCTTG
AGTGATGAGGACGACAGCAACAGTGAGGAAGTCACCAATGCCATTATGCATGATGTTGAT
ACAGACAAGGATGGTCGGATTAGTTATGAGGAATTTGCTGCGATGATGAAGGCTGGTACG
GATTGGAGAAAAGCATCGAGACAATATTCACGTGAACGTTTTAACAGTCTCAGCTTAAAA
TTGATGAGGGATGGCTCATTACAAGTTGAAAACAAAGTCTAG

Peptide Sequence

PEP ID

PGSC0003DMP400018934
PEP Infomation

pacid=37439224 transcript=PGSC0003DMT400027809 locus=PGSC0003DMG400010704 ID=PGSC0003DMT400027809.v4.03 annot-version=v4.03
Sequence

MGNCCVKPGKSAEKKNKKNNSKPNPFSIDYGGTKHASGSGNKLVVLKEPTRQNIHDKYDL
GRELGRGEFGVTYLCTDLEGGEKYACKSISKKKLRTAVDIDDVRREVEIMKHLPVHPNIV
TLKDTYEDDNAVHIVMELCEGGELFDRIVARGHYTERAAAGILKTVVEVVQMCHRHGVMH
RDLKPENFLFGNKKETAPLKAIDFGLSVFFKPGEHFNEIVGSPYYMAPEVLKRNYGPEVD
VWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPKVSDNAKDLVKKMLDPD
PTRRLTAHQVLEHPWLHNIKKAPNVSLGETVKARLKQFSVMNKLKKKALAVIAEFLSAEE
VAGMKEAFEMMDTGKKGKINLEELKDGLQKLGHQIPDADLQILMEAADVDGDGSLNYPEF
VAVSIHLRKMANDEHLHKAFSFFDKNQSGYIEIEELRSALSDEDDSNSEEVTNAIMHDVD
TDKDGRISYEEFAAMMKAGTDWRKASRQYSRERFNSLSLKLMRDGSLQVENKV*

Transcript Sequence

Transcript ID

PGSC0003DMT400027809
Transcript Infomation

pacid=37439224 locus=PGSC0003DMG400010704 ID=PGSC0003DMT400027809.v4.03 annot-version=v4.03
Sequence

ATGGGTAATTGCTGTGTGAAACCGGGTAAATCTGCTGAAAAAAAGAACAAAAAGAACAAC
AGCAAACCCAACCCTTTTTCAATTGATTATGGGGGTACTAAACATGCCTCTGGGAGTGGA
AACAAGCTAGTTGTATTAAAAGAGCCAACAAGGCAAAATATACATGATAAGTATGATTTG
GGTCGTGAGCTCGGAAGAGGAGAATTTGGGGTTACTTATCTATGTACTGACTTGGAAGGA
GGAGAGAAATATGCCTGCAAATCGATATCTAAGAAGAAGCTAAGGACTGCAGTGGATATT
GATGATGTTAGGAGAGAGGTTGAGATCATGAAACATTTGCCTGTGCATCCGAATATTGTG
ACCTTGAAGGATACTTATGAGGATGATAATGCAGTGCACATTGTTATGGAATTGTGTGAG
GGTGGGGAGTTGTTTGATCGAATCGTTGCTAGAGGCCACTATACAGAGAGGGCAGCTGCT
GGAATTTTGAAGACTGTCGTGGAAGTCGTTCAGATGTGTCACAGACATGGGGTAATGCAT
CGTGATCTCAAACCTGAGAATTTTCTTTTTGGTAACAAGAAAGAAACAGCTCCGCTGAAG
GCTATTGACTTTGGGTTGTCTGTTTTCTTTAAACCTGGGGAACACTTTAATGAGATAGTG
GGAAGTCCTTATTACATGGCTCCTGAGGTCCTAAAGCGCAACTATGGACCAGAGGTCGAT
GTCTGGAGTGCTGGAGTTATACTTTATATTCTTCTTTGTGGTGTTCCACCTTTCTGGGCA
GAGACTGAACAAGGAGTAGCCCAAGCGATTATTCGTTCTGTGATTGATTTCAAGAGGGAT
CCATGGCCTAAAGTTTCTGATAATGCAAAGGATCTTGTAAAGAAAATGCTTGATCCAGAT
CCAACTCGACGGCTCACAGCTCATCAAGTTCTTGAGCATCCCTGGTTACATAATATAAAG
AAAGCACCAAACGTCTCATTGGGTGAGACTGTAAAAGCAAGACTCAAGCAGTTTTCAGTA
ATGAACAAGCTCAAGAAAAAAGCCCTCGCGGTTATAGCTGAGTTTTTGTCTGCGGAGGAA
GTCGCTGGAATGAAGGAAGCATTTGAAATGATGGATACTGGAAAGAAGGGCAAGATAAAC
CTTGAAGAACTTAAAGATGGCTTGCAGAAGCTTGGCCATCAAATCCCTGATGCTGATCTT
CAGATTCTCATGGAAGCGGCTGACGTTGATGGAGATGGAAGTTTAAATTATCCAGAGTTT
GTTGCTGTATCTATTCATCTTAGAAAGATGGCCAATGATGAACACCTGCACAAAGCATTT
TCATTTTTTGACAAAAATCAGAGTGGTTACATAGAAATCGAAGAGCTTCGTAGTGCCTTG
AGTGATGAGGACGACAGCAACAGTGAGGAAGTCACCAATGCCATTATGCATGATGTTGAT
ACAGACAAGGATGGTCGGATTAGTTATGAGGAATTTGCTGCGATGATGAAGGCTGGTACG
GATTGGAGAAAAGCATCGAGACAATATTCACGTGAACGTTTTAACAGTCTCAGCTTAAAA
TTGATGAGGGATGGCTCATTACAAGTTGAAAACAAAGTCTAG