Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400027704
CDS Infomation

pacid=37436476 polypeptide=PGSC0003DMP400018879 locus=PGSC0003DMG400010677 ID=PGSC0003DMT400027704.v4.03 annot-version=v4.03
Sequence

ATGGAGGGGAAGAATCCCAAGGTCATTGAGAATTCTGAAGGGGCCAGAACAACTCCTTCT
GTGGTTGCATTTAACCAGAAGGGAGAACTTCTTGTTGGTACTCCAGCCAAACGTCAGGCA
GTTACCAATCCTACAAACACTCTTTCTGGGACCAAGCGTCTAATTGGCAGACGCTTTGAT
GATCCTCAAACACAAAAGGAGATGAAGATGGTTCCTTACAAGATTGTGAGAGGCTCAAAT
GGAGATGCTTGGGTTGAAGCAAATGGCCAGCAATATTCTCCAAGCCAAATTGGAGCATTT
ATTCTAACAAAGATGAAGGAAACCGCAGAGGCCTACCTTGGGAAATCTATTAATAAAGCT
GTGATCACTGTTCCAGCTTATTTCAATGATGCTCAGAGGCAGGCAACAAAGGACGCTGGG
CGAATTGCAGGTCTTGATGTGCAAAGGATTATTAATGAACCTACTGCAGCTGCGCTGTCT
TATGGTATGAATAGCAAAGAAGGCCTTGTCGCTGTTTTTGATCTTGGCGGTGGAACATTT
GATGTTTCAATCCTGGAGATATCAAATGGTGTTTTTGAGGTCAAGGCAACTAATGGTGAC
ACCTTTTTAGGAGGAGAGGATTTTGACAATGCGTTGTTAGAATTTTTAGTGAGCGAGTTT
AAGAGGACTGAGGGAATTGACCTATCAAAAGACAAGCTTGCCCTACAAAGACTGCGAGAG
GCAGCTGAGAAAGCTAAGATAGAGCTTTCATCAACATCTCAAACTGATATTAACTTGCCG
TTCATCACAGCTGATGCATCAGGGGCTAAACATCTTAATATCACACTGACAAGATCAAAA
TTTGAGACATTGGTGAACCACTTAATTGAGAGGACAAGGAATCCTTGCAAGAATTGTTTG
AAGGATGCTGGAGTATCTTTAAAAGATGTGGATGAAGTCCTCCTTGTTGGAGGTATGACA
CGGGTTCCTAAGGTGCAGGAAATAGTTTCTGAGATATTTGGTAAAAGCCCCAGCAAAGGT
GTCAATCCAGATGAGGCAGTTGCCATGGGAGCTGCTCTTCAAGGTGGTATTCTCCGTGGT
GATGTCAAAGAGTTGCTTCTTTTGGATGTAACTCCACTATCTCTCGGTATTGAGACATTG
GGAGGTATCTTCACTAGGTTAATAAACAGGAATACTACCATTCCCACAAAGAAAAGCCAG
GTGTTTTCTACTGCTGCAGACAACCAAACACAAGTTGGCATCAAGGTATTACAAGGTGAA
CGTGAAATGGCATCTGATAATAAGCTTCTGGGTGAATTTGATCTTGTAGGTATTCCTCCG
GCGCCAAGGGGTATGCCTCAGATTGAGGTCACCTTTGACATAGATGCAAATGGAATGGTC
ACCGTGTCTGCCAAAGACAAGGCTACTAGCAAAGAGCAGCAGATTACCATTCGGTCATCT
GGTGGTCTATCAGAAGATGAGATAGACAAAATGGTCAGGGAAGCAGAGATGCATGCCCAG
AAGGATCAAGAACGCAAGGCACTTATTGATATCAGGAATAGTGCAGACACTACCATATAT
AGTATCGAGAAGAGCTTGAGTGAGTACAAGGAGAAGGTCCCCAAGGAAGTGGTTACAGAA
ATCGAGACGGCTATTTCTGATTTGAGAGCAGCAATGGGGACTGAGAACATTGATGATATC
AAGGCGAAACTTGATGCAGCAAACAAAGCTGTCTCAAAGATTGGAGAGCACATGGCTGGT
GGCAGTTCTGGTGGTGGTGGTGCACAAGGAGGAGATCAACCACCAGAGGCAGAATACGAG
GAAGTAAAGAAATAG

Peptide Sequence

PEP ID

PGSC0003DMP400018879
PEP Infomation

pacid=37436476 transcript=PGSC0003DMT400027704 locus=PGSC0003DMG400010677 ID=PGSC0003DMT400027704.v4.03 annot-version=v4.03
Sequence

MEGKNPKVIENSEGARTTPSVVAFNQKGELLVGTPAKRQAVTNPTNTLSGTKRLIGRRFD
DPQTQKEMKMVPYKIVRGSNGDAWVEANGQQYSPSQIGAFILTKMKETAEAYLGKSINKA
VITVPAYFNDAQRQATKDAGRIAGLDVQRIINEPTAAALSYGMNSKEGLVAVFDLGGGTF
DVSILEISNGVFEVKATNGDTFLGGEDFDNALLEFLVSEFKRTEGIDLSKDKLALQRLRE
AAEKAKIELSSTSQTDINLPFITADASGAKHLNITLTRSKFETLVNHLIERTRNPCKNCL
KDAGVSLKDVDEVLLVGGMTRVPKVQEIVSEIFGKSPSKGVNPDEAVAMGAALQGGILRG
DVKELLLLDVTPLSLGIETLGGIFTRLINRNTTIPTKKSQVFSTAADNQTQVGIKVLQGE
REMASDNKLLGEFDLVGIPPAPRGMPQIEVTFDIDANGMVTVSAKDKATSKEQQITIRSS
GGLSEDEIDKMVREAEMHAQKDQERKALIDIRNSADTTIYSIEKSLSEYKEKVPKEVVTE
IETAISDLRAAMGTENIDDIKAKLDAANKAVSKIGEHMAGGSSGGGGAQGGDQPPEAEYE
EVKK*

Transcript Sequence

Transcript ID

PGSC0003DMT400027704
Transcript Infomation

pacid=37436476 locus=PGSC0003DMG400010677 ID=PGSC0003DMT400027704.v4.03 annot-version=v4.03
Sequence

ATGGAGGGGAAGAATCCCAAGGTCATTGAGAATTCTGAAGGGGCCAGAACAACTCCTTCT
GTGGTTGCATTTAACCAGAAGGGAGAACTTCTTGTTGGTACTCCAGCCAAACGTCAGGCA
GTTACCAATCCTACAAACACTCTTTCTGGGACCAAGCGTCTAATTGGCAGACGCTTTGAT
GATCCTCAAACACAAAAGGAGATGAAGATGGTTCCTTACAAGATTGTGAGAGGCTCAAAT
GGAGATGCTTGGGTTGAAGCAAATGGCCAGCAATATTCTCCAAGCCAAATTGGAGCATTT
ATTCTAACAAAGATGAAGGAAACCGCAGAGGCCTACCTTGGGAAATCTATTAATAAAGCT
GTGATCACTGTTCCAGCTTATTTCAATGATGCTCAGAGGCAGGCAACAAAGGACGCTGGG
CGAATTGCAGGTCTTGATGTGCAAAGGATTATTAATGAACCTACTGCAGCTGCGCTGTCT
TATGGTATGAATAGCAAAGAAGGCCTTGTCGCTGTTTTTGATCTTGGCGGTGGAACATTT
GATGTTTCAATCCTGGAGATATCAAATGGTGTTTTTGAGGTCAAGGCAACTAATGGTGAC
ACCTTTTTAGGAGGAGAGGATTTTGACAATGCGTTGTTAGAATTTTTAGTGAGCGAGTTT
AAGAGGACTGAGGGAATTGACCTATCAAAAGACAAGCTTGCCCTACAAAGACTGCGAGAG
GCAGCTGAGAAAGCTAAGATAGAGCTTTCATCAACATCTCAAACTGATATTAACTTGCCG
TTCATCACAGCTGATGCATCAGGGGCTAAACATCTTAATATCACACTGACAAGATCAAAA
TTTGAGACATTGGTGAACCACTTAATTGAGAGGACAAGGAATCCTTGCAAGAATTGTTTG
AAGGATGCTGGAGTATCTTTAAAAGATGTGGATGAAGTCCTCCTTGTTGGAGGTATGACA
CGGGTTCCTAAGGTGCAGGAAATAGTTTCTGAGATATTTGGTAAAAGCCCCAGCAAAGGT
GTCAATCCAGATGAGGCAGTTGCCATGGGAGCTGCTCTTCAAGGTGGTATTCTCCGTGGT
GATGTCAAAGAGTTGCTTCTTTTGGATGTAACTCCACTATCTCTCGGTATTGAGACATTG
GGAGGTATCTTCACTAGGTTAATAAACAGGAATACTACCATTCCCACAAAGAAAAGCCAG
GTGTTTTCTACTGCTGCAGACAACCAAACACAAGTTGGCATCAAGGTATTACAAGGTGAA
CGTGAAATGGCATCTGATAATAAGCTTCTGGGTGAATTTGATCTTGTAGGTATTCCTCCG
GCGCCAAGGGGTATGCCTCAGATTGAGGTCACCTTTGACATAGATGCAAATGGAATGGTC
ACCGTGTCTGCCAAAGACAAGGCTACTAGCAAAGAGCAGCAGATTACCATTCGGTCATCT
GGTGGTCTATCAGAAGATGAGATAGACAAAATGGTCAGGGAAGCAGAGATGCATGCCCAG
AAGGATCAAGAACGCAAGGCACTTATTGATATCAGGAATAGTGCAGACACTACCATATAT
AGTATCGAGAAGAGCTTGAGTGAGTACAAGGAGAAGGTCCCCAAGGAAGTGGTTACAGAA
ATCGAGACGGCTATTTCTGATTTGAGAGCAGCAATGGGGACTGAGAACATTGATGATATC
AAGGCGAAACTTGATGCAGCAAACAAAGCTGTCTCAAAGATTGGAGAGCACATGGCTGGT
GGCAGTTCTGGTGGTGGTGGTGCACAAGGAGGAGATCAACCACCAGAGGCAGAATACGAG
GAAGTAAAGAAATAG