Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400027621
CDS Infomation

pacid=37436625 polypeptide=PGSC0003DMP400018817 locus=PGSC0003DMG400010653 ID=PGSC0003DMT400027621.v4.03 annot-version=v4.03
Sequence

ATGCAAGCTCAGAGGGCAGCTCCATCTGATTTGCAATGCAAGGATAAATTTTTGATTCAG
TGCACAGTTGTTCCTTTTGGAACTAATGAAGAGGAAATTCCACCCAGCATGTTCAACAAA
GATAATGGAAAATATATTGACGAGTGCAAATTAAAGGTTGTTCTGGTTAGCCCACCCCAG
TCTCCAGTTCTGCAGCCAGCTAATGGAATTTCCAAGCAAGGTGCATCTATTGAGACTTCG
ATGCAACAGGAAAAATTTCCAAGTGGTGTTGAAAACCTTCCTCCAGCTCAAACTGTGGTT
AAGAACAACAAGGATATTAAATTTGAGGAAGAAACAGAGGAACCAAGATTGGGTAACATT
GCAGACGACAAAGATCTGAGCTTTGCAAAAAATACTGAGTCCAATATTGATGAGATTGAT
GAAACAATATGTCAAGTGGTTGAGAACAAGAAGGGTGCAGATTTTGATGCAGAAGAAGAG
GAACCAAGATTGGCTAAGACTGCGGAAAACGTCAAGTTGAATTCTCCTAAGAACAGGGAG
TCTAATGCCAATGAAGTTGAGGTTGTTAAATCAAGACATCTGAACACGGAGACAAAATTG
TCACTATCCAAAGATGTTGAGGAGCTAAAGTCTAAGATAAATTCACTGGGTTCTCAGCTA
ATTGAGGCTGAATGCATAATTGCAAAGTTAAAAGAAGAGAGGCGAAGTACCATCAAAGAC
GTGGAAATTTTGAAGCAAGAATTGGCATTACTAAAGACAAAGGGTGTTGGAAAAAGATCT
CAAGTTGGTTTTCCCCCGTTATTCCTTTGCATGGTTGCATTGATTTGTCTCACCATTGGG
TATCTTGTACGTGCTTAA

Peptide Sequence

PEP ID

PGSC0003DMP400018817
PEP Infomation

pacid=37436625 transcript=PGSC0003DMT400027621 locus=PGSC0003DMG400010653 ID=PGSC0003DMT400027621.v4.03 annot-version=v4.03
Sequence

MQAQRAAPSDLQCKDKFLIQCTVVPFGTNEEEIPPSMFNKDNGKYIDECKLKVVLVSPPQ
SPVLQPANGISKQGASIETSMQQEKFPSGVENLPPAQTVVKNNKDIKFEEETEEPRLGNI
ADDKDLSFAKNTESNIDEIDETICQVVENKKGADFDAEEEEPRLAKTAENVKLNSPKNRE
SNANEVEVVKSRHLNTETKLSLSKDVEELKSKINSLGSQLIEAECIIAKLKEERRSTIKD
VEILKQELALLKTKGVGKRSQVGFPPLFLCMVALICLTIGYLVRA*

Transcript Sequence

Transcript ID

PGSC0003DMT400027621
Transcript Infomation

pacid=37436625 locus=PGSC0003DMG400010653 ID=PGSC0003DMT400027621.v4.03 annot-version=v4.03
Sequence

ATGCAAGCTCAGAGGGCAGCTCCATCTGATTTGCAATGCAAGGATAAATTTTTGATTCAG
TGCACAGTTGTTCCTTTTGGAACTAATGAAGAGGAAATTCCACCCAGCATGTTCAACAAA
GATAATGGAAAATATATTGACGAGTGCAAATTAAAGGTTGTTCTGGTTAGCCCACCCCAG
TCTCCAGTTCTGCAGCCAGCTAATGGAATTTCCAAGCAAGGTGCATCTATTGAGACTTCG
ATGCAACAGGAAAAATTTCCAAGTGGTGTTGAAAACCTTCCTCCAGCTCAAACTGTGGTT
AAGAACAACAAGGATATTAAATTTGAGGAAGAAACAGAGGAACCAAGATTGGGTAACATT
GCAGACGACAAAGATCTGAGCTTTGCAAAAAATACTGAGTCCAATATTGATGAGATTGAT
GAAACAATATGTCAAGTGGTTGAGAACAAGAAGGGTGCAGATTTTGATGCAGAAGAAGAG
GAACCAAGATTGGCTAAGACTGCGGAAAACGTCAAGTTGAATTCTCCTAAGAACAGGGAG
TCTAATGCCAATGAAGTTGAGGTTGTTAAATCAAGACATCTGAACACGGAGACAAAATTG
TCACTATCCAAAGATGTTGAGGAGCTAAAGTCTAAGATAAATTCACTGGGTTCTCAGCTA
ATTGAGGCTGAATGCATAATTGCAAAGTTAAAAGAAGAGAGGCGAAGTACCATCAAAGAC
GTGGAAATTTTGAAGCAAGAATTGGCATTACTAAAGACAAAGGGTGTTGGAAAAAGATCT
CAAGTTGGTTTTCCCCCGTTATTCCTTTGCATGGTTGCATTGATTTGTCTCACCATTGGG
TATCTTGTACGTGCTTAA