Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400027593
CDS Infomation

pacid=37475964 polypeptide=PGSC0003DMP400018798 locus=PGSC0003DMG400010637 ID=PGSC0003DMT400027593.v4.03 annot-version=v4.03
Sequence

ATGGATACTTTGTTGAAAACCCCAAATAACCTTGAATTTCTGAACCCACTTCATGGTTTT
GCTGTTAAAGCTAGTACCTTTAGCTCTGTGAAGCCTAAGAGATTTGGTTCTAGGAAGTTT
TGTGAAACTTTGGGTAGAAGTGTTTGTGTTAAGGCTAGTAGTAGTGCTCTTTTAGAGCTT
GTACCTGAGACCAAAAAGGAAAATCTTGATTTTGAGCTTCCTATGTATGATCCTTCAAAA
GGGGTTGTTGTGGATCTTGCTGTGGTTGGTGGTGGCCCTGCAGGGCTTGCTGTTGCACAG
CAAGTTTCTGAAGCAGGACTCTCTGTTTGTTCAATTGATCCGAATCCTAAATTGATATGG
CCTAATAACTATGGTGTTTGGGTGGATGAATTTGAGGCTATGGACTTGTTAGATTGTCTA
GATGCTACCTGGTCCGGTGCAGCTGTGTACATTGATGATAATACGACTAAAGATCTCAAT
AGACCTTATGGAAGGGTTAACCGAAAACAGCTGAAATCAAAAATGATGCAGAAATGCATA
ATGAATGGTGTTAAATTCCACCAAGCCAAAGTTATAAAGGTGATTCATGAGGAATCGAAA
TCCATGTTGATATGCAATGATGGTATTACTATTCAGGCAATGGTGGTGCTCGATGCAACT
GGCTTCTCTAGATCTCTTGTTCAGTATGATAAGCCTTATAACCCTGGGTATCAAGTTGCT
TATGGCATTTTGGCTGAAGTGGAAGAGCACCCCTTTGATGTAAACAAGATGGTTTTCATG
GATTGGCGAGATTCTCATTTGAAGAACAATGCTGATCTCAAGGAGAGAAATAGTAGAATA
CCAACTTTTCTTTATGCAATGCCATTTTCATCCAACAGGATATTTCTTGAAGAAACCTCA
CTCGTAGCTCGTCCTGGTTTGCGTATAGAAGATATTCAAGAACGAATGGTGGCTCGTTTA
AACCACTTGGGGATAAAAGTGAAGAGCATTGAAGAAGATGAACATTGTCTAATACCAATG
GGTGGTCCACTTCCAGTATTACCTCAGAGAGTCATTGGAATCGGTGGTACAGCTGGTATG
GTTCATCCGTCCACCGGTTATATGGTGGCAAGGACACTAGCTGCAGCTCCTGTTGTTGCC
AATGCCATAATTCAATACCTCAGTTCTGAAAGAAGTCATTCGGGTAATGAATTATCCACA
GGTGTTTGGAAAGATTTGTGGCCTATAGAGAGGAGACGTCAAAGAGAGTTTTTCTGCTTC
GGTATGGATATTCTTTTGAAGCTTGATTTACCTGCTACAAGAAGGTTCTTTGATGCATTC
TTCGACTTAGAACCTCGTTATTGGCATGGCTTCTTATCGTCTCGATTGTTTCTACCTGAA
CTCATAGTTTTTGGGCTGTCTCTATTCTCTCATGCTTCAAATACTTGTAGATTAGAGATA
ATGACAAAGGGAACTGTTCCTTTGGTAAATATGATCAACAATTTGTTACAGGATAAAGAA
TGA

Peptide Sequence

PEP ID

PGSC0003DMP400018798
PEP Infomation

pacid=37475964 transcript=PGSC0003DMT400027593 locus=PGSC0003DMG400010637 ID=PGSC0003DMT400027593.v4.03 annot-version=v4.03
Sequence

MDTLLKTPNNLEFLNPLHGFAVKASTFSSVKPKRFGSRKFCETLGRSVCVKASSSALLEL
VPETKKENLDFELPMYDPSKGVVVDLAVVGGGPAGLAVAQQVSEAGLSVCSIDPNPKLIW
PNNYGVWVDEFEAMDLLDCLDATWSGAAVYIDDNTTKDLNRPYGRVNRKQLKSKMMQKCI
MNGVKFHQAKVIKVIHEESKSMLICNDGITIQAMVVLDATGFSRSLVQYDKPYNPGYQVA
YGILAEVEEHPFDVNKMVFMDWRDSHLKNNADLKERNSRIPTFLYAMPFSSNRIFLEETS
LVARPGLRIEDIQERMVARLNHLGIKVKSIEEDEHCLIPMGGPLPVLPQRVIGIGGTAGM
VHPSTGYMVARTLAAAPVVANAIIQYLSSERSHSGNELSTGVWKDLWPIERRRQREFFCF
GMDILLKLDLPATRRFFDAFFDLEPRYWHGFLSSRLFLPELIVFGLSLFSHASNTCRLEI
MTKGTVPLVNMINNLLQDKE*

Transcript Sequence

Transcript ID

PGSC0003DMT400027593
Transcript Infomation

pacid=37475964 locus=PGSC0003DMG400010637 ID=PGSC0003DMT400027593.v4.03 annot-version=v4.03
Sequence

ATGGATACTTTGTTGAAAACCCCAAATAACCTTGAATTTCTGAACCCACTTCATGGTTTT
GCTGTTAAAGCTAGTACCTTTAGCTCTGTGAAGCCTAAGAGATTTGGTTCTAGGAAGTTT
TGTGAAACTTTGGGTAGAAGTGTTTGTGTTAAGGCTAGTAGTAGTGCTCTTTTAGAGCTT
GTACCTGAGACCAAAAAGGAAAATCTTGATTTTGAGCTTCCTATGTATGATCCTTCAAAA
GGGGTTGTTGTGGATCTTGCTGTGGTTGGTGGTGGCCCTGCAGGGCTTGCTGTTGCACAG
CAAGTTTCTGAAGCAGGACTCTCTGTTTGTTCAATTGATCCGAATCCTAAATTGATATGG
CCTAATAACTATGGTGTTTGGGTGGATGAATTTGAGGCTATGGACTTGTTAGATTGTCTA
GATGCTACCTGGTCCGGTGCAGCTGTGTACATTGATGATAATACGACTAAAGATCTCAAT
AGACCTTATGGAAGGGTTAACCGAAAACAGCTGAAATCAAAAATGATGCAGAAATGCATA
ATGAATGGTGTTAAATTCCACCAAGCCAAAGTTATAAAGGTGATTCATGAGGAATCGAAA
TCCATGTTGATATGCAATGATGGTATTACTATTCAGGCAATGGTGGTGCTCGATGCAACT
GGCTTCTCTAGATCTCTTGTTCAGTATGATAAGCCTTATAACCCTGGGTATCAAGTTGCT
TATGGCATTTTGGCTGAAGTGGAAGAGCACCCCTTTGATGTAAACAAGATGGTTTTCATG
GATTGGCGAGATTCTCATTTGAAGAACAATGCTGATCTCAAGGAGAGAAATAGTAGAATA
CCAACTTTTCTTTATGCAATGCCATTTTCATCCAACAGGATATTTCTTGAAGAAACCTCA
CTCGTAGCTCGTCCTGGTTTGCGTATAGAAGATATTCAAGAACGAATGGTGGCTCGTTTA
AACCACTTGGGGATAAAAGTGAAGAGCATTGAAGAAGATGAACATTGTCTAATACCAATG
GGTGGTCCACTTCCAGTATTACCTCAGAGAGTCATTGGAATCGGTGGTACAGCTGGTATG
GTTCATCCGTCCACCGGTTATATGGTGGCAAGGACACTAGCTGCAGCTCCTGTTGTTGCC
AATGCCATAATTCAATACCTCAGTTCTGAAAGAAGTCATTCGGGTAATGAATTATCCACA
GGTGTTTGGAAAGATTTGTGGCCTATAGAGAGGAGACGTCAAAGAGAGTTTTTCTGCTTC
GGTATGGATATTCTTTTGAAGCTTGATTTACCTGCTACAAGAAGGTTCTTTGATGCATTC
TTCGACTTAGAACCTCGTTATTGGCATGGCTTCTTATCGTCTCGATTGTTTCTACCTGAA
CTCATAGTTTTTGGGCTGTCTCTATTCTCTCATGCTTCAAATACTTGTAGATTAGAGATA
ATGACAAAGGGAACTGTTCCTTTGGTAAATATGATCAACAATTTGTTACAGGATAAAGAA
TGA