Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400027519
CDS Infomation

pacid=37475558 polypeptide=PGSC0003DMP400018746 locus=PGSC0003DMG400010607 ID=PGSC0003DMT400027519.v4.03 annot-version=v4.03
Sequence

ATGCTGTGTGCTTGTTCAGGTGAGCAATTCAAATTTGATGAGCCACCACCAGAGTCTCCT
GAGTCATTGGCCACAAGGGATTTTTCAGCTAGTGGTATTTCTTCAAGAAATGGAACAGTA
GATTGGGATTCAAAACTTGATGATGCACAAGTTGATGAAGTTGAATCAACTTTAAAAGAG
GCACTTTCCTTGAACTATGAGGAAGCAAGAGCTTTGTTGGGGAGGCTAGAATATCAAAGA
GGGAATTTTGATGCTGCCCTTCAAGTGTTTCAAGGAATAGATATTAGAACCCTGTCTTCG
AGAATGTCTAAAGCCATTTCTGAGAGAACAAGGCCCTTAAAACCGCGTTCCAAAGGTGAT
ATCGTGCCTGCTGGTGTAATGTCACTGCATTCTGTGAGTTTACTTCTTGAAGCAATTCTG
CTTAAAGCAAAATCCTTAGAAGAGCTCAGCCGAATCAAAGATGCTGCAAAGGAGTGCAAG
ATGATGCTGGATGTTGTCGATTCAGCATTACCAAATGGAATACCAGATGGAATTTCTGAA
GACTGCAAGTTATTGGAGATGTTTCATAAAGCACTCGAGTTACTTCCGAAGTTATGGATA
CAAGCAGGATATTTGGATGAAGCTGTGCTTGCATATCGAAGGGCGCTAATCAAGCCATGG
AATTTGGATTCCCAAAGATTGGCCTGTATACAAAAAGACTTAGCCACCACTTTACTCTTT
GGAGGCGTTGAAGTTGAGGTTCCTGCTCAATTTCAAGTGTGGGGTTCAACAGCCCCTAAA
AGTAACTTGGAGGAAGCAATTCTCTTGTTGTTTGTACTCATGAGCAGAATGCTAAATGGT
CAAATAATATGGGATTCTGAAGTCATGAGCCATTTGACATTCGCGCTGACAATTTCTAAC
AACTTTGAGTCTGTTGCAGATCATATTGAGCAGGTTATTCCTGGAGTTTATACCCGAGCA
GAGAGGTGGTATCTACTTGCTCTTTGTTACAGTGCTGCAGGTCAGAATGATACGGCATTG
AACCTTGTCAAGAAAATTTCTGGATGTTCGGAAGCCAACCAAGAACCTTATATTCCATCT
CTCTTGTTAGGAGCAAAGCTGTGTTCTCAGGATCTGCAGCAAGCTCACGAGGGGATAAAT
TTTGCTCGTCAAGTAATTAACTCGGCCAAAAATCAAGACGAACATTTCCTAGTTCAAGCT
CATAAACTTCTTGGCGTCTGTTATGGAAATGCTGCAAGAGTTTCCCTTTCGGATTTTGAA
AGAAATTTCTGCCAAAGAGAAGCATTAGCTGCCTTAAACTCAGCTTCAGTTTGCAAGGAG
GATCCAGAAATTATGTTTATTCTTGGATTAGAAAATGCCATCCAAAGAAACTTGACTCCA
GCTTTTAATAATGTAATGTGCTACTCAGAAATGTCGGCTGGAAGTACAGCGAAAGCTTGG
AAGTTGTTGGCTTTAGTCGTTTCTGCAGAACAGAGATTCAAAGATGCTGAAGCCATAGTT
GATCTTGCTCTCGATGAGACTGGACAAATCGACCAAATGGAACATCTCAGATTAAAAGCT
GTCCTTCAAATATCTCAACAACAGCCCAAGCAAGCCATAGAGACATACAGGATTCTGCTT
GCTTTGATTCAAGCACAAAAGGAGTCTGCGACAAATGATGTGGTAACTTCTCAGAGAAGA
TTAGAAGTTGAAGCATGGCTTGATTTAGCAGGATTATATACAGATCTTGAGTCGTGGCGT
GATGCTGAAATATGTATAAACAGAGCCAAAGCAATTCAATTTTTCTGCCCGCGGAATTGG
CATGCAACAGGTGTATTATTTCAAGCTAAAGCAAGATATAAGGAAGCTCTTGTTGCCTTC
ACAGTTTCTCTATCAATAGAACCAGATTATATCCCCAGCATTGTTTCTACAGCTAAAGTC
CTTATGAAGATGAGTAACGACGTAGCCCCTATTGCTAGAAGCTTTTTAATGAATGCTCTA
CGATTAGAACCAACGAACCATGAGGCATGGTTTAACCTTGGAATGCTTGCAAAGATGGAA
GGATCAGTCCATCAAGCAGCAGATTTTTTCCAAGCTGCACACGAGTTAAAGCTTTCTGCA
CCAGTTCAAAATTTTATCTGA

Peptide Sequence

PEP ID

PGSC0003DMP400018746
PEP Infomation

pacid=37475558 transcript=PGSC0003DMT400027519 locus=PGSC0003DMG400010607 ID=PGSC0003DMT400027519.v4.03 annot-version=v4.03
Sequence

MLCACSGEQFKFDEPPPESPESLATRDFSASGISSRNGTVDWDSKLDDAQVDEVESTLKE
ALSLNYEEARALLGRLEYQRGNFDAALQVFQGIDIRTLSSRMSKAISERTRPLKPRSKGD
IVPAGVMSLHSVSLLLEAILLKAKSLEELSRIKDAAKECKMMLDVVDSALPNGIPDGISE
DCKLLEMFHKALELLPKLWIQAGYLDEAVLAYRRALIKPWNLDSQRLACIQKDLATTLLF
GGVEVEVPAQFQVWGSTAPKSNLEEAILLLFVLMSRMLNGQIIWDSEVMSHLTFALTISN
NFESVADHIEQVIPGVYTRAERWYLLALCYSAAGQNDTALNLVKKISGCSEANQEPYIPS
LLLGAKLCSQDLQQAHEGINFARQVINSAKNQDEHFLVQAHKLLGVCYGNAARVSLSDFE
RNFCQREALAALNSASVCKEDPEIMFILGLENAIQRNLTPAFNNVMCYSEMSAGSTAKAW
KLLALVVSAEQRFKDAEAIVDLALDETGQIDQMEHLRLKAVLQISQQQPKQAIETYRILL
ALIQAQKESATNDVVTSQRRLEVEAWLDLAGLYTDLESWRDAEICINRAKAIQFFCPRNW
HATGVLFQAKARYKEALVAFTVSLSIEPDYIPSIVSTAKVLMKMSNDVAPIARSFLMNAL
RLEPTNHEAWFNLGMLAKMEGSVHQAADFFQAAHELKLSAPVQNFI*

Transcript Sequence

Transcript ID

PGSC0003DMT400027519
Transcript Infomation

pacid=37475558 locus=PGSC0003DMG400010607 ID=PGSC0003DMT400027519.v4.03 annot-version=v4.03
Sequence

ATGCTGTGTGCTTGTTCAGGTGAGCAATTCAAATTTGATGAGCCACCACCAGAGTCTCCT
GAGTCATTGGCCACAAGGGATTTTTCAGCTAGTGGTATTTCTTCAAGAAATGGAACAGTA
GATTGGGATTCAAAACTTGATGATGCACAAGTTGATGAAGTTGAATCAACTTTAAAAGAG
GCACTTTCCTTGAACTATGAGGAAGCAAGAGCTTTGTTGGGGAGGCTAGAATATCAAAGA
GGGAATTTTGATGCTGCCCTTCAAGTGTTTCAAGGAATAGATATTAGAACCCTGTCTTCG
AGAATGTCTAAAGCCATTTCTGAGAGAACAAGGCCCTTAAAACCGCGTTCCAAAGGTGAT
ATCGTGCCTGCTGGTGTAATGTCACTGCATTCTGTGAGTTTACTTCTTGAAGCAATTCTG
CTTAAAGCAAAATCCTTAGAAGAGCTCAGCCGAATCAAAGATGCTGCAAAGGAGTGCAAG
ATGATGCTGGATGTTGTCGATTCAGCATTACCAAATGGAATACCAGATGGAATTTCTGAA
GACTGCAAGTTATTGGAGATGTTTCATAAAGCACTCGAGTTACTTCCGAAGTTATGGATA
CAAGCAGGATATTTGGATGAAGCTGTGCTTGCATATCGAAGGGCGCTAATCAAGCCATGG
AATTTGGATTCCCAAAGATTGGCCTGTATACAAAAAGACTTAGCCACCACTTTACTCTTT
GGAGGCGTTGAAGTTGAGGTTCCTGCTCAATTTCAAGTGTGGGGTTCAACAGCCCCTAAA
AGTAACTTGGAGGAAGCAATTCTCTTGTTGTTTGTACTCATGAGCAGAATGCTAAATGGT
CAAATAATATGGGATTCTGAAGTCATGAGCCATTTGACATTCGCGCTGACAATTTCTAAC
AACTTTGAGTCTGTTGCAGATCATATTGAGCAGGTTATTCCTGGAGTTTATACCCGAGCA
GAGAGGTGGTATCTACTTGCTCTTTGTTACAGTGCTGCAGGTCAGAATGATACGGCATTG
AACCTTGTCAAGAAAATTTCTGGATGTTCGGAAGCCAACCAAGAACCTTATATTCCATCT
CTCTTGTTAGGAGCAAAGCTGTGTTCTCAGGATCTGCAGCAAGCTCACGAGGGGATAAAT
TTTGCTCGTCAAGTAATTAACTCGGCCAAAAATCAAGACGAACATTTCCTAGTTCAAGCT
CATAAACTTCTTGGCGTCTGTTATGGAAATGCTGCAAGAGTTTCCCTTTCGGATTTTGAA
AGAAATTTCTGCCAAAGAGAAGCATTAGCTGCCTTAAACTCAGCTTCAGTTTGCAAGGAG
GATCCAGAAATTATGTTTATTCTTGGATTAGAAAATGCCATCCAAAGAAACTTGACTCCA
GCTTTTAATAATGTAATGTGCTACTCAGAAATGTCGGCTGGAAGTACAGCGAAAGCTTGG
AAGTTGTTGGCTTTAGTCGTTTCTGCAGAACAGAGATTCAAAGATGCTGAAGCCATAGTT
GATCTTGCTCTCGATGAGACTGGACAAATCGACCAAATGGAACATCTCAGATTAAAAGCT
GTCCTTCAAATATCTCAACAACAGCCCAAGCAAGCCATAGAGACATACAGGATTCTGCTT
GCTTTGATTCAAGCACAAAAGGAGTCTGCGACAAATGATGTGGTAACTTCTCAGAGAAGA
TTAGAAGTTGAAGCATGGCTTGATTTAGCAGGATTATATACAGATCTTGAGTCGTGGCGT
GATGCTGAAATATGTATAAACAGAGCCAAAGCAATTCAATTTTTCTGCCCGCGGAATTGG
CATGCAACAGGTGTATTATTTCAAGCTAAAGCAAGATATAAGGAAGCTCTTGTTGCCTTC
ACAGTTTCTCTATCAATAGAACCAGATTATATCCCCAGCATTGTTTCTACAGCTAAAGTC
CTTATGAAGATGAGTAACGACGTAGCCCCTATTGCTAGAAGCTTTTTAATGAATGCTCTA
CGATTAGAACCAACGAACCATGAGGCATGGTTTAACCTTGGAATGCTTGCAAAGATGGAA
GGATCAGTCCATCAAGCAGCAGATTTTTTCCAAGCTGCACACGAGTTAAAGCTTTCTGCA
CCAGTTCAAAATTTTATCTGA