Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400027448
CDS Infomation

pacid=37433402 polypeptide=PGSC0003DMP400018717 locus=PGSC0003DMG400010587 ID=PGSC0003DMT400027448.v4.03 annot-version=v4.03
Sequence

ATGGTTGGACTTGGTGGTGAGATGGAGATTACACGTCGATGTGCCAATCATCATCCTTCT
GTTTGGGGAGACCATTTTCTTGCCTATGCTAATCTTTCGGGAGCCAATGAATGGGAAGAG
AAGGAACATGAAGACCAAAAAGGAGGAGTGAGAAAAATGCTAGTGATGGCTCCTTCCAAA
TCTTTGCAAAAACTTGAACTTATAAACACAATCCAATTGCTTGGAGTGGCATACCATTTT
GAACATGAGATTGAGGAATTGTTGAGTTGCTTTTATACTTGTTACGATGACTGGATTGGT
GAATTTGGTGAAAGCGACCTTCATGTTGTTGCTCTAAGCTTTCGATTACTTAGGCAACAA
GGTTATTATGTCTCATCGGATGCTTTTGGGAAATTCATTAACGAGCAAGGAAGTTACAAG
GAAGAACTGGCCAGGGACGTACAAGGATTATTGAGCTTGTACGAGGCAGCGCAATTCAGA
GTACATGATGAAGAAATTCTGGATGAAGCAATTAATTTCACCACTACTCATTTGAAGCTA
ATTTTGCCTAATTTGAGCGATCCCCTTGCGACTCAAGTCAGTAACGCACTGAAATTTCCA
ATCAACAATATTATAGTGAGGGTAGGAACGAGGAAATACATATCATTTTACAAAGAAGAT
GAATCACACAGTGAAATGTTACTAAATTTTGCTAAATTGGACTTCAACATCTTACAAAGG
TTGCATAAAAAGGAGCTATGTGATATCACAAGGTGGTGGAAAGAATCAGAAATCGCGCAG
GCACTACCTTTTGCAAGAGATAGAGTGGTTGAATTATACTTTTGGAGTTTAGGTGTATAC
TTTGTGCCTCAATATAGTGTTGCAAGGAAAATATTAACCAAAGTGTTGTGCTTCTGTTCT
ATTATGGATGACACTTACGATACCTATGGTACACTTGATGAACTTACTCTCCTCACAACG
GCAATTGAAAGGTGGGACATTGATGCTTCAGAACAATTACCGCCATATATGAAACTCTCC
TACCGTGCTCTTCTACAAGTTTACAATGAAACAGAGAGAGAATTGGAAAATCTTGGAAAT
AAGACATTCCGAGTCAAATATTCCATAAATGAGATGAAAAAGTTGTTGAAGGCTTACTTC
CAAGAGGCCAAATGGTATCATGCGAAGGATGTGCCAACAATGGAACAGTATATAAAGAAT
GGAATTCCATCTAGTACTTACCTATTGCTTGCCACTACTTCTTGGTTAGGCATGGGAGAT
GCAGCAACTAAGGACGCGTTTGATTGGATATCGAATGAACCTACAATTCTTGTAGCTTCG
TGTATCATTGCAAGATTACTGAATGATCTCGTAACACATGAGATAGAGGTGGAAAGAGGA
GATGTAGCTTCGGGTATCGAATGTTACATGAATGAGCATGGTGCAACAACAGAAGAAGCT
TACATGGAGATAAGGAAAATAATAGAGATTAATTGGAAGGATTTGAATAGAGGATGTCTA
AAACCTACAACAGTACCAAGAGTTTTGCTTATGCCAGTGCTCAATCTTACGAGGGTGGCA
GAGTTTTTTTATAAAGATGAGGATGCTTATACTTTTTCGAAAAATAACTTGAAAGATGTC
ATCTCTATGGTGCTAATTGATCCTATTGAAGCATGA

Peptide Sequence

PEP ID

PGSC0003DMP400018717
PEP Infomation

pacid=37433402 transcript=PGSC0003DMT400027448 locus=PGSC0003DMG400010587 ID=PGSC0003DMT400027448.v4.03 annot-version=v4.03
Sequence

MVGLGGEMEITRRCANHHPSVWGDHFLAYANLSGANEWEEKEHEDQKGGVRKMLVMAPSK
SLQKLELINTIQLLGVAYHFEHEIEELLSCFYTCYDDWIGEFGESDLHVVALSFRLLRQQ
GYYVSSDAFGKFINEQGSYKEELARDVQGLLSLYEAAQFRVHDEEILDEAINFTTTHLKL
ILPNLSDPLATQVSNALKFPINNIIVRVGTRKYISFYKEDESHSEMLLNFAKLDFNILQR
LHKKELCDITRWWKESEIAQALPFARDRVVELYFWSLGVYFVPQYSVARKILTKVLCFCS
IMDDTYDTYGTLDELTLLTTAIERWDIDASEQLPPYMKLSYRALLQVYNETERELENLGN
KTFRVKYSINEMKKLLKAYFQEAKWYHAKDVPTMEQYIKNGIPSSTYLLLATTSWLGMGD
AATKDAFDWISNEPTILVASCIIARLLNDLVTHEIEVERGDVASGIECYMNEHGATTEEA
YMEIRKIIEINWKDLNRGCLKPTTVPRVLLMPVLNLTRVAEFFYKDEDAYTFSKNNLKDV
ISMVLIDPIEA*

Transcript Sequence

Transcript ID

PGSC0003DMT400027448
Transcript Infomation

pacid=37433402 locus=PGSC0003DMG400010587 ID=PGSC0003DMT400027448.v4.03 annot-version=v4.03
Sequence

ATGGTTGGACTTGGTGGTGAGATGGAGATTACACGTCGATGTGCCAATCATCATCCTTCT
GTTTGGGGAGACCATTTTCTTGCCTATGCTAATCTTTCGGGAGCCAATGAATGGGAAGAG
AAGGAACATGAAGACCAAAAAGGAGGAGTGAGAAAAATGCTAGTGATGGCTCCTTCCAAA
TCTTTGCAAAAACTTGAACTTATAAACACAATCCAATTGCTTGGAGTGGCATACCATTTT
GAACATGAGATTGAGGAATTGTTGAGTTGCTTTTATACTTGTTACGATGACTGGATTGGT
GAATTTGGTGAAAGCGACCTTCATGTTGTTGCTCTAAGCTTTCGATTACTTAGGCAACAA
GGTTATTATGTCTCATCGGATGCTTTTGGGAAATTCATTAACGAGCAAGGAAGTTACAAG
GAAGAACTGGCCAGGGACGTACAAGGATTATTGAGCTTGTACGAGGCAGCGCAATTCAGA
GTACATGATGAAGAAATTCTGGATGAAGCAATTAATTTCACCACTACTCATTTGAAGCTA
ATTTTGCCTAATTTGAGCGATCCCCTTGCGACTCAAGTCAGTAACGCACTGAAATTTCCA
ATCAACAATATTATAGTGAGGGTAGGAACGAGGAAATACATATCATTTTACAAAGAAGAT
GAATCACACAGTGAAATGTTACTAAATTTTGCTAAATTGGACTTCAACATCTTACAAAGG
TTGCATAAAAAGGAGCTATGTGATATCACAAGGTGGTGGAAAGAATCAGAAATCGCGCAG
GCACTACCTTTTGCAAGAGATAGAGTGGTTGAATTATACTTTTGGAGTTTAGGTGTATAC
TTTGTGCCTCAATATAGTGTTGCAAGGAAAATATTAACCAAAGTGTTGTGCTTCTGTTCT
ATTATGGATGACACTTACGATACCTATGGTACACTTGATGAACTTACTCTCCTCACAACG
GCAATTGAAAGGTGGGACATTGATGCTTCAGAACAATTACCGCCATATATGAAACTCTCC
TACCGTGCTCTTCTACAAGTTTACAATGAAACAGAGAGAGAATTGGAAAATCTTGGAAAT
AAGACATTCCGAGTCAAATATTCCATAAATGAGATGAAAAAGTTGTTGAAGGCTTACTTC
CAAGAGGCCAAATGGTATCATGCGAAGGATGTGCCAACAATGGAACAGTATATAAAGAAT
GGAATTCCATCTAGTACTTACCTATTGCTTGCCACTACTTCTTGGTTAGGCATGGGAGAT
GCAGCAACTAAGGACGCGTTTGATTGGATATCGAATGAACCTACAATTCTTGTAGCTTCG
TGTATCATTGCAAGATTACTGAATGATCTCGTAACACATGAGATAGAGGTGGAAAGAGGA
GATGTAGCTTCGGGTATCGAATGTTACATGAATGAGCATGGTGCAACAACAGAAGAAGCT
TACATGGAGATAAGGAAAATAATAGAGATTAATTGGAAGGATTTGAATAGAGGATGTCTA
AAACCTACAACAGTACCAAGAGTTTTGCTTATGCCAGTGCTCAATCTTACGAGGGTGGCA
GAGTTTTTTTATAAAGATGAGGATGCTTATACTTTTTCGAAAAATAACTTGAAAGATGTC
ATCTCTATGGTGCTAATTGATCCTATTGAAGCATGA