Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400027435
CDS Infomation

pacid=37424452 polypeptide=PGSC0003DMP400018709 locus=PGSC0003DMG402010580 ID=PGSC0003DMT400027435.v4.03 annot-version=v4.03
Sequence

ATGAGCAGCGTAATTGGTGGTAAAGTGTGGAATGGAATAGGCAGAAAGGGTTTGTTGAAT
GGAAATAGTAGAAGATGGTACGGTCTAATTCCGATGGTGATAGAGCATTCTTCCCGTGGA
GAGAGGGCTTACGACATATTCTCAAGGCTGCTCAAAGAGCGTATCATTTGCATCAATGGA
CCCATTAACGATGACACTTCCCATGTTGTCGTTGCTCAGCTTCTTTACCTTGAGTCTGAG
AACCCTTCCAAGCCTATTCACATGTACCTCAACTCTCCCGGTGGCGCTGTTACTGCCGGT
CTTGCTATCTACGATACTATGCAGTACATCCGATCTCCAATCAATACTATTTGTCTAGGT
CAAGCAGCTTCAATGGGATCCCTTCTCTTAGCTGCTGGTGCCAAGGGTGAGAGGCGTTCT
CTCCCTAATGCTACAGTCATGATTCATCAGCCTTCTGGTGGATATAGTGGTCAAGCTAAA
GATATGACAATTCACACCAAACAGATTGTTCGGGTATGGGATGCTTTGAACCGACTATAC
TCCAAGCATACGGGACAACCAGTCGAAATAATTCAGAAGAACATGGATAGGGATTATTTC
ATGACAGCCCAAGAAGCCAAGGAATTTGGGATAATTGATGAGGTTATCGATCAAAGACCA
ATCACTCTGGTAACTGATGCTATTGCTAACGACGCCAAAGATAAAGGTTCAAGTTAG

Peptide Sequence

PEP ID

PGSC0003DMP400018709
PEP Infomation

pacid=37424452 transcript=PGSC0003DMT400027435 locus=PGSC0003DMG402010580 ID=PGSC0003DMT400027435.v4.03 annot-version=v4.03
Sequence

MSSVIGGKVWNGIGRKGLLNGNSRRWYGLIPMVIEHSSRGERAYDIFSRLLKERIICING
PINDDTSHVVVAQLLYLESENPSKPIHMYLNSPGGAVTAGLAIYDTMQYIRSPINTICLG
QAASMGSLLLAAGAKGERRSLPNATVMIHQPSGGYSGQAKDMTIHTKQIVRVWDALNRLY
SKHTGQPVEIIQKNMDRDYFMTAQEAKEFGIIDEVIDQRPITLVTDAIANDAKDKGSS*

Transcript Sequence

Transcript ID

PGSC0003DMT400027435
Transcript Infomation

pacid=37424452 locus=PGSC0003DMG402010580 ID=PGSC0003DMT400027435.v4.03 annot-version=v4.03
Sequence

ATGAGCAGCGTAATTGGTGGTAAAGTGTGGAATGGAATAGGCAGAAAGGGTTTGTTGAAT
GGAAATAGTAGAAGATGGTACGGTCTAATTCCGATGGTGATAGAGCATTCTTCCCGTGGA
GAGAGGGCTTACGACATATTCTCAAGGCTGCTCAAAGAGCGTATCATTTGCATCAATGGA
CCCATTAACGATGACACTTCCCATGTTGTCGTTGCTCAGCTTCTTTACCTTGAGTCTGAG
AACCCTTCCAAGCCTATTCACATGTACCTCAACTCTCCCGGTGGCGCTGTTACTGCCGGT
CTTGCTATCTACGATACTATGCAGTACATCCGATCTCCAATCAATACTATTTGTCTAGGT
CAAGCAGCTTCAATGGGATCCCTTCTCTTAGCTGCTGGTGCCAAGGGTGAGAGGCGTTCT
CTCCCTAATGCTACAGTCATGATTCATCAGCCTTCTGGTGGATATAGTGGTCAAGCTAAA
GATATGACAATTCACACCAAACAGATTGTTCGGGTATGGGATGCTTTGAACCGACTATAC
TCCAAGCATACGGGACAACCAGTCGAAATAATTCAGAAGAACATGGATAGGGATTATTTC
ATGACAGCCCAAGAAGCCAAGGAATTTGGGATAATTGATGAGGTTATCGATCAAAGACCA
ATCACTCTGGTAACTGATGCTATTGCTAACGACGCCAAAGATAAAGGTTCAAGTTAG