Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400027429
CDS Infomation

pacid=37425424 polypeptide=PGSC0003DMP400018703 locus=PGSC0003DMG400010577 ID=PGSC0003DMT400027429.v4.03 annot-version=v4.03
Sequence

ATGTTTCTCTCTCAGCTATTCATTCTCTTATTGTGTATTCAAACAATCATCATATCTGTT
GCCACTAACATTCATGAAGAAAACATTGCCATATCATGTGGTGCCTCTGGCAATTCCCCT
GCACCAGATGGACGATTATGGATTGGAGATTCAACTTTCACTTCCTCATTTCTACACTTA
ACTGGAAAATCTATTAATTCAAGAGTACCTTGCCAAGTTGCCTTGTTGGATCCAGTTCCT
TATAAGTCTGCTCGAACGTCTCGCCATCAGTTTACCTACAAATTTTCAGTGAAACCAGGA
CACAAGTTCTTACGCCTGCACTTCAAACCAGCTTCATACAAAGGTTTCATCAAGTCCAAA
CCCATTTTTACTGTCAAAACTGATCAGCATACCCTGCTCAGTGACTTCATACCTACCCTT
GCTGCAGGCATCAACTATTTCAAAAAGGAATTTTGCATCAATGTAAAAGAAAGTGAAACA
TTAAGCATAACATTCATACCATCTCGAAAATCAGGCTTTTCAGAAGACACTTATGCTTTT
GTTAATGCAATCGAGATTGTTTCCATACCGTCTGGTCTGTATTTCACACCAGATGGCGAT
CAGGGAGTCCCTGTTGTTGGACGAAATTTCAGATTCTACATTGACAATAGCACAGCACTG
GAGACAATTCAGCGAATAAATGTTGGCGGAAACTCTATTTCATCCTTGGAAGATGCAACC
ATGTTTCGGGACTGGGAAGATGACACTAATTACCTGATTCAAGTTGGTGCCTTTTCGATC
AACAGAGCCGTTGATATCAGATATGCATCCTCAGCAACTCACATTGCACCAAAAGAAGTT
TACCAAACGGCCAGGTCAATGGGTGCTCACTGCCATTCGAATTTCTGTAATCTCACATGG
AACATTCCACTTGATTTGGGATTCAGATACCTTGTTAGGCTTCACTTTTGTGAAATTGAA
CCTACAATGATAAATGAAGGCCAAAGGAATTTCACTATTGTCATAAACAATCAGAATGCT
GAAGATGATGCTGATGTGATCAAATGGAGTGGGGGGCATGGAATTTCTGTATACAGGGAC
TATGTTGCCATTATGGAGGGTGATAGAAGGGAAGGGAAGCGTAACCTTACTATAGTTTTG
CAGCCAAACTTTGCTTCAATCGGTAAACATGCTAATGCCATCTTAAATGGGCTAGAAGTC
TTCAAGATAAGCAACCCTGACAACAATCTTGGTAGTGTGAGCCCAGTGCATCCTGTTACA
AGTTCAACACCAGAAAAATCAGAGGAAACTGTGCTGTTCTATACAAAGAATCAAATTGCA
ACTGCACTGACATTTATAGTCACTTTGATTAACGTTGCTGTTTATTACATTAGGCATAAT
GCAGAAATAAAGTCTGGCAAGACGTATAATGGAATATCTTCAGGAGAGCATCAGTGTCGT
CAATTTTCACTGGATGAGATGGAAAGATCAACGAACAATTTTGATCCTCAGCTTGTCATT
GGTAGCGGTGGATATGGTACAGTATACAAAGGGGATATTGATGGTGGAGAGACCACTGTA
GCAGTTAAGCGATCGAAACCAGGATCTAGCCAGGGGGAGAAAGAGTTTTGGACGGAAATC
AATATGTTATCTACGCACCGCCATGAGAACCTTCTCTCCCTCATTGGTTACTGCATTGAA
GGTCATGAGATGTTATTAGTTTATGATTATATGCCTCGAGGATCACTTGCTGACAACCTG
TACAAAATGGACAGAAATAGCTCATCTCTCTCTTGGGAACGGAGACTCAAGATTGCTATA
GGTGCTGCACGTGGACTGGATTTCCTTCATACATCTCAAAATAGGGTGATACATCGTGAT
ATCAAAAGCTCAAACATTCTATTGGATGAAAACTGGGAAAGTAAGATCTCAGATTTTGGG
TTGTCCAAAATGGGGCCTGGAAATGAATCAGCTACTCATGTTAGTACACAAGTCAAAGGC
ACATTTGGGTACCTCGATCCTGAGTACTTCCTGACTAATAGATTGACATGGAAAACTGAT
GTATATGCTTTTGGAGTAGTACTATTTGAATTGCTCTCAGGAAGACCTGCAGTCGATATG
AGCCTGCCTGAGGAACAACATGGACTTGTAGCATGGGCCAAACAATGCATCAAGGAAGGA
GAAATTAATAAGCTTATTGATCAGAATCTGTTGGGGTCCATCTCATCAACTTGTCTAAAG
GCGTTTATAGGAATTTCTGCTAAATGCTTCGATGGTCGTCCGCAAGAACGGCCTGCGATG
TCTGAAGTGGTGAAAAGCCTGGAATTAGCATTAGTATTTCAGAAGAACGAAGGTGAAGGT
ATCATTTCATTTGAGGACACATCAACGTCATCTCAGTTACAGATTGAAGGAGAGAGGGCA
TCCATTAAAGAGGATTGTAATGGCGGTGATACAACAGAAAGGAGTGCCATCTCAAGGGAA
AAGGTAAAATCTGAGGATAAAAGTCCCTACACTGCTTCACCAAGATGGTGGGATGTTCGT
AGCCATTTCAGAAAAGCACCACCAAAGCCAGTGAATCTTGTTTATCCAGATAGCCAAATA
TCACAGCACCCAAATTTAAGGATATTTTCTTTCTCTGAACTCAAGGCCGCCACCAGAAAA
TTTAGCAATGACACGGTGCTGGGAGAAGGTGGTTTTGGTAAAGTTTACAAGGGTTACCTT
GCTGAGTCTCTTTCTTCCAAGAGTGGCCGGACAGTAATTGCGGTTAAGCAATTGAGTTCT
GAAAGCTTTCAAGGGTGGCAGTCTGAGGTGAGCATTCTTGGAAGACTTTCTCATCCTAAC
CTCATCAAACTCTTGGGTTACTGCCAGGAAGATAAAGAACTACTGCTTGTCTATGAGTTT
ATGCCAAAGGGCAGCTTGAACAACCATCTTTTTGGAAGGCGCTCTGTTGCTTTGTCACTT
CCATGGAATGTAAGGGTTCAAATTATGATTGGCGCAGCTCGAGGCTTGGCATTCCTACAT
GCATCAGAAAAGCAAGTCATTTACAGAGACTTCAAAGCCTCAAATTTATTACTTGATGGC
TCTTACAATGCGAAGATAGCAGATTTTGGCTTGGCAAAACAAGGTATTTCGGCTAGTCAA
TCACATGTGACAACACAGGTACTTGGAACGTACGGTTATGCTGCTCCCGAGTATATTGCA
ACAGGACACTTGTACGTGAAGAGCGATGTCTATGCTTTTGGTGTCTTTTTAGTGGAAATG
CTAACAGGTTTACGAGTAATAGACTTAAACCGCCCAAGCAACCAGCATAATCTAATTGAC
TGGATTAAGCCTCATTTATCTGACAAAAGGAAGTTGAAGGACAGAATCGATTCACGGCTG
GGAGGAAAATATCCATCCAGAGCTGCAGTACAAATAGCACAACTGGCACTATCATGTCTT
GGAAATGAACCTAAAAGCAGACCATCGATGAAGGAAATAGTGGAGAAACTAGAACAGATT
GAAGTTACCAATGAAAGATCCAAGGACCATGCTTCTCCTTCTAATCCAAGGAACCGGGCC
TATCCACTCCTTAGAAGAGCAGAGTGA

Peptide Sequence

PEP ID

PGSC0003DMP400018703
PEP Infomation

pacid=37425424 transcript=PGSC0003DMT400027429 locus=PGSC0003DMG400010577 ID=PGSC0003DMT400027429.v4.03 annot-version=v4.03
Sequence

MFLSQLFILLLCIQTIIISVATNIHEENIAISCGASGNSPAPDGRLWIGDSTFTSSFLHL
TGKSINSRVPCQVALLDPVPYKSARTSRHQFTYKFSVKPGHKFLRLHFKPASYKGFIKSK
PIFTVKTDQHTLLSDFIPTLAAGINYFKKEFCINVKESETLSITFIPSRKSGFSEDTYAF
VNAIEIVSIPSGLYFTPDGDQGVPVVGRNFRFYIDNSTALETIQRINVGGNSISSLEDAT
MFRDWEDDTNYLIQVGAFSINRAVDIRYASSATHIAPKEVYQTARSMGAHCHSNFCNLTW
NIPLDLGFRYLVRLHFCEIEPTMINEGQRNFTIVINNQNAEDDADVIKWSGGHGISVYRD
YVAIMEGDRREGKRNLTIVLQPNFASIGKHANAILNGLEVFKISNPDNNLGSVSPVHPVT
SSTPEKSEETVLFYTKNQIATALTFIVTLINVAVYYIRHNAEIKSGKTYNGISSGEHQCR
QFSLDEMERSTNNFDPQLVIGSGGYGTVYKGDIDGGETTVAVKRSKPGSSQGEKEFWTEI
NMLSTHRHENLLSLIGYCIEGHEMLLVYDYMPRGSLADNLYKMDRNSSSLSWERRLKIAI
GAARGLDFLHTSQNRVIHRDIKSSNILLDENWESKISDFGLSKMGPGNESATHVSTQVKG
TFGYLDPEYFLTNRLTWKTDVYAFGVVLFELLSGRPAVDMSLPEEQHGLVAWAKQCIKEG
EINKLIDQNLLGSISSTCLKAFIGISAKCFDGRPQERPAMSEVVKSLELALVFQKNEGEG
IISFEDTSTSSQLQIEGERASIKEDCNGGDTTERSAISREKVKSEDKSPYTASPRWWDVR
SHFRKAPPKPVNLVYPDSQISQHPNLRIFSFSELKAATRKFSNDTVLGEGGFGKVYKGYL
AESLSSKSGRTVIAVKQLSSESFQGWQSEVSILGRLSHPNLIKLLGYCQEDKELLLVYEF
MPKGSLNNHLFGRRSVALSLPWNVRVQIMIGAARGLAFLHASEKQVIYRDFKASNLLLDG
SYNAKIADFGLAKQGISASQSHVTTQVLGTYGYAAPEYIATGHLYVKSDVYAFGVFLVEM
LTGLRVIDLNRPSNQHNLIDWIKPHLSDKRKLKDRIDSRLGGKYPSRAAVQIAQLALSCL
GNEPKSRPSMKEIVEKLEQIEVTNERSKDHASPSNPRNRAYPLLRRAE*

Transcript Sequence

Transcript ID

PGSC0003DMT400027429
Transcript Infomation

pacid=37425424 locus=PGSC0003DMG400010577 ID=PGSC0003DMT400027429.v4.03 annot-version=v4.03
Sequence

ATGTTTCTCTCTCAGCTATTCATTCTCTTATTGTGTATTCAAACAATCATCATATCTGTT
GCCACTAACATTCATGAAGAAAACATTGCCATATCATGTGGTGCCTCTGGCAATTCCCCT
GCACCAGATGGACGATTATGGATTGGAGATTCAACTTTCACTTCCTCATTTCTACACTTA
ACTGGAAAATCTATTAATTCAAGAGTACCTTGCCAAGTTGCCTTGTTGGATCCAGTTCCT
TATAAGTCTGCTCGAACGTCTCGCCATCAGTTTACCTACAAATTTTCAGTGAAACCAGGA
CACAAGTTCTTACGCCTGCACTTCAAACCAGCTTCATACAAAGGTTTCATCAAGTCCAAA
CCCATTTTTACTGTCAAAACTGATCAGCATACCCTGCTCAGTGACTTCATACCTACCCTT
GCTGCAGGCATCAACTATTTCAAAAAGGAATTTTGCATCAATGTAAAAGAAAGTGAAACA
TTAAGCATAACATTCATACCATCTCGAAAATCAGGCTTTTCAGAAGACACTTATGCTTTT
GTTAATGCAATCGAGATTGTTTCCATACCGTCTGGTCTGTATTTCACACCAGATGGCGAT
CAGGGAGTCCCTGTTGTTGGACGAAATTTCAGATTCTACATTGACAATAGCACAGCACTG
GAGACAATTCAGCGAATAAATGTTGGCGGAAACTCTATTTCATCCTTGGAAGATGCAACC
ATGTTTCGGGACTGGGAAGATGACACTAATTACCTGATTCAAGTTGGTGCCTTTTCGATC
AACAGAGCCGTTGATATCAGATATGCATCCTCAGCAACTCACATTGCACCAAAAGAAGTT
TACCAAACGGCCAGGTCAATGGGTGCTCACTGCCATTCGAATTTCTGTAATCTCACATGG
AACATTCCACTTGATTTGGGATTCAGATACCTTGTTAGGCTTCACTTTTGTGAAATTGAA
CCTACAATGATAAATGAAGGCCAAAGGAATTTCACTATTGTCATAAACAATCAGAATGCT
GAAGATGATGCTGATGTGATCAAATGGAGTGGGGGGCATGGAATTTCTGTATACAGGGAC
TATGTTGCCATTATGGAGGGTGATAGAAGGGAAGGGAAGCGTAACCTTACTATAGTTTTG
CAGCCAAACTTTGCTTCAATCGGTAAACATGCTAATGCCATCTTAAATGGGCTAGAAGTC
TTCAAGATAAGCAACCCTGACAACAATCTTGGTAGTGTGAGCCCAGTGCATCCTGTTACA
AGTTCAACACCAGAAAAATCAGAGGAAACTGTGCTGTTCTATACAAAGAATCAAATTGCA
ACTGCACTGACATTTATAGTCACTTTGATTAACGTTGCTGTTTATTACATTAGGCATAAT
GCAGAAATAAAGTCTGGCAAGACGTATAATGGAATATCTTCAGGAGAGCATCAGTGTCGT
CAATTTTCACTGGATGAGATGGAAAGATCAACGAACAATTTTGATCCTCAGCTTGTCATT
GGTAGCGGTGGATATGGTACAGTATACAAAGGGGATATTGATGGTGGAGAGACCACTGTA
GCAGTTAAGCGATCGAAACCAGGATCTAGCCAGGGGGAGAAAGAGTTTTGGACGGAAATC
AATATGTTATCTACGCACCGCCATGAGAACCTTCTCTCCCTCATTGGTTACTGCATTGAA
GGTCATGAGATGTTATTAGTTTATGATTATATGCCTCGAGGATCACTTGCTGACAACCTG
TACAAAATGGACAGAAATAGCTCATCTCTCTCTTGGGAACGGAGACTCAAGATTGCTATA
GGTGCTGCACGTGGACTGGATTTCCTTCATACATCTCAAAATAGGGTGATACATCGTGAT
ATCAAAAGCTCAAACATTCTATTGGATGAAAACTGGGAAAGTAAGATCTCAGATTTTGGG
TTGTCCAAAATGGGGCCTGGAAATGAATCAGCTACTCATGTTAGTACACAAGTCAAAGGC
ACATTTGGGTACCTCGATCCTGAGTACTTCCTGACTAATAGATTGACATGGAAAACTGAT
GTATATGCTTTTGGAGTAGTACTATTTGAATTGCTCTCAGGAAGACCTGCAGTCGATATG
AGCCTGCCTGAGGAACAACATGGACTTGTAGCATGGGCCAAACAATGCATCAAGGAAGGA
GAAATTAATAAGCTTATTGATCAGAATCTGTTGGGGTCCATCTCATCAACTTGTCTAAAG
GCGTTTATAGGAATTTCTGCTAAATGCTTCGATGGTCGTCCGCAAGAACGGCCTGCGATG
TCTGAAGTGGTGAAAAGCCTGGAATTAGCATTAGTATTTCAGAAGAACGAAGGTGAAGGT
ATCATTTCATTTGAGGACACATCAACGTCATCTCAGTTACAGATTGAAGGAGAGAGGGCA
TCCATTAAAGAGGATTGTAATGGCGGTGATACAACAGAAAGGAGTGCCATCTCAAGGGAA
AAGGTAAAATCTGAGGATAAAAGTCCCTACACTGCTTCACCAAGATGGTGGGATGTTCGT
AGCCATTTCAGAAAAGCACCACCAAAGCCAGTGAATCTTGTTTATCCAGATAGCCAAATA
TCACAGCACCCAAATTTAAGGATATTTTCTTTCTCTGAACTCAAGGCCGCCACCAGAAAA
TTTAGCAATGACACGGTGCTGGGAGAAGGTGGTTTTGGTAAAGTTTACAAGGGTTACCTT
GCTGAGTCTCTTTCTTCCAAGAGTGGCCGGACAGTAATTGCGGTTAAGCAATTGAGTTCT
GAAAGCTTTCAAGGGTGGCAGTCTGAGGTGAGCATTCTTGGAAGACTTTCTCATCCTAAC
CTCATCAAACTCTTGGGTTACTGCCAGGAAGATAAAGAACTACTGCTTGTCTATGAGTTT
ATGCCAAAGGGCAGCTTGAACAACCATCTTTTTGGAAGGCGCTCTGTTGCTTTGTCACTT
CCATGGAATGTAAGGGTTCAAATTATGATTGGCGCAGCTCGAGGCTTGGCATTCCTACAT
GCATCAGAAAAGCAAGTCATTTACAGAGACTTCAAAGCCTCAAATTTATTACTTGATGGC
TCTTACAATGCGAAGATAGCAGATTTTGGCTTGGCAAAACAAGGTATTTCGGCTAGTCAA
TCACATGTGACAACACAGGTACTTGGAACGTACGGTTATGCTGCTCCCGAGTATATTGCA
ACAGGACACTTGTACGTGAAGAGCGATGTCTATGCTTTTGGTGTCTTTTTAGTGGAAATG
CTAACAGGTTTACGAGTAATAGACTTAAACCGCCCAAGCAACCAGCATAATCTAATTGAC
TGGATTAAGCCTCATTTATCTGACAAAAGGAAGTTGAAGGACAGAATCGATTCACGGCTG
GGAGGAAAATATCCATCCAGAGCTGCAGTACAAATAGCACAACTGGCACTATCATGTCTT
GGAAATGAACCTAAAAGCAGACCATCGATGAAGGAAATAGTGGAGAAACTAGAACAGATT
GAAGTTACCAATGAAAGATCCAAGGACCATGCTTCTCCTTCTAATCCAAGGAACCGGGCC
TATCCACTCCTTAGAAGAGCAGAGTGA