Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400027316
CDS Infomation

pacid=37479285 polypeptide=PGSC0003DMP400018633 locus=PGSC0003DMG400010537 ID=PGSC0003DMT400027316.v4.03 annot-version=v4.03
Sequence

ATGCAATACATTTCACTTACAATTGCATTTGCTATAATTTTAGTTATTTTTTTGAGATGG
AGACTCTTGAATTGGTTGTGGTTGCAGCCAAGGCCTTTGGAGAAATGCCTGAGAGAGTTG
GGCTTCAGGGGAAATTCTTACAGGTTGTTAGTTGGAGACATGAATGAAGTTGTGAAGATG
GATGAAGAAGCAAAGTCCAAGCCTATTAAATTCTCACATGATATTGTACCAAGACTCATG
CCCTTCATCCACAAAACAATCATTGATTATGGTAAGAATTCTTTTATATGGTTGGGACCA
AATCCAGCAATGCTCATCATGGAACCAGAACATATAAGGGAGATCTTGTCGAAGAGTAAT
ATTTTCCAGAAACCTCCCCCTGCACTCACGAAGCTGCTAGCCGAAGGAATCTTGAGCTAT
GAAGCAGATAAATGGGCTAAACATAGAAGAATCATCAATCCTGCTTTTCACCTTGACAAG
TTGAAGCATATGGTACCATCATTTCATTTGACTACTTGTGAGATGTTGAGCAAATGGGAG
AAAATTGTCTCGACGGAAGGATCAGAGGTAGATGTGTGGCCATATCTTCAAACATTGACA
AGTGATGCCATTTCAAGAACTGCTTTTGGAAGTAGCTATGAAGAAGGTAGAAAGATACAT
GAACTTCAACAAGAACTAGCCAAAATTATTGTAAAAGAGACAGAGGCAAGTTACATTAGG
TTTCTGCCGACCAAAGAAAAGAGAAGGATGAACCGTCTACATCAGGAAGTACGTTCACTA
GTATTGAGAATAATCAATAAGAGAATGAATGAAATTGAAGCAGGGGAGACGTCTAATAGT
GATGACTTATTGGGCATATTATTGGAATCCAACTTGAAAGAAATCCAAGAGCATGGAAAT
AAGAAATTTGGAATGAGTATTGATGAGGTAATTGAAGAGTGTAAATTGTTCTATCTTGCT
GGACAAGAGACAACTTCAGCTTTGCTTGTATGGTCGATGATTTTATTGAGCAAACACTCC
GATTGGCAAGCTCGTGCTAGAGAAGAGGTTTTGCAAGTCTTTGGCAACAACATACCTGAT
TATGATAAGTTGAGTCAACTCAAAGTTGTAACCATGATTATGCAAGAAGTTTTGAGATTG
TATCCACCAATTTTTTTGATGGGTAGAGAGGTACACAAAGAAACCAAATTAGGCAACTTG
TCAATACCAAGTGGAGTGCAACTCCTATTGCCAACAATATTGTTGCATCATGACCAAGAA
ATATGGGGTGAAGATGTTAAAGAATTCAATCCAGAGAGGTTTAGTGAAGGAGTCAATAGA
GCAACAAAAGGAAAATTTGCATATTTTCCATTTAGTTGGGGACCTAGAAATTGCATTGGA
CAAAACTTTGCTATGTTGGAGGCTAAAATGGCACTTGCTATGATTCTACAGCAATTTGCT
TTTGAAGTTTCTCCATCTTATGCTCATGTTCCTTATTCAGTTTTCACTCTTCTACCTCAA
TATGGTGCTCAACTAATTCTAAACAAGCTATAG

Peptide Sequence

PEP ID

PGSC0003DMP400018633
PEP Infomation

pacid=37479285 transcript=PGSC0003DMT400027316 locus=PGSC0003DMG400010537 ID=PGSC0003DMT400027316.v4.03 annot-version=v4.03
Sequence

MQYISLTIAFAIILVIFLRWRLLNWLWLQPRPLEKCLRELGFRGNSYRLLVGDMNEVVKM
DEEAKSKPIKFSHDIVPRLMPFIHKTIIDYGKNSFIWLGPNPAMLIMEPEHIREILSKSN
IFQKPPPALTKLLAEGILSYEADKWAKHRRIINPAFHLDKLKHMVPSFHLTTCEMLSKWE
KIVSTEGSEVDVWPYLQTLTSDAISRTAFGSSYEEGRKIHELQQELAKIIVKETEASYIR
FLPTKEKRRMNRLHQEVRSLVLRIINKRMNEIEAGETSNSDDLLGILLESNLKEIQEHGN
KKFGMSIDEVIEECKLFYLAGQETTSALLVWSMILLSKHSDWQARAREEVLQVFGNNIPD
YDKLSQLKVVTMIMQEVLRLYPPIFLMGREVHKETKLGNLSIPSGVQLLLPTILLHHDQE
IWGEDVKEFNPERFSEGVNRATKGKFAYFPFSWGPRNCIGQNFAMLEAKMALAMILQQFA
FEVSPSYAHVPYSVFTLLPQYGAQLILNKL*

Transcript Sequence

Transcript ID

PGSC0003DMT400027316
Transcript Infomation

pacid=37479285 locus=PGSC0003DMG400010537 ID=PGSC0003DMT400027316.v4.03 annot-version=v4.03
Sequence

ATGCAATACATTTCACTTACAATTGCATTTGCTATAATTTTAGTTATTTTTTTGAGATGG
AGACTCTTGAATTGGTTGTGGTTGCAGCCAAGGCCTTTGGAGAAATGCCTGAGAGAGTTG
GGCTTCAGGGGAAATTCTTACAGGTTGTTAGTTGGAGACATGAATGAAGTTGTGAAGATG
GATGAAGAAGCAAAGTCCAAGCCTATTAAATTCTCACATGATATTGTACCAAGACTCATG
CCCTTCATCCACAAAACAATCATTGATTATGGTAAGAATTCTTTTATATGGTTGGGACCA
AATCCAGCAATGCTCATCATGGAACCAGAACATATAAGGGAGATCTTGTCGAAGAGTAAT
ATTTTCCAGAAACCTCCCCCTGCACTCACGAAGCTGCTAGCCGAAGGAATCTTGAGCTAT
GAAGCAGATAAATGGGCTAAACATAGAAGAATCATCAATCCTGCTTTTCACCTTGACAAG
TTGAAGCATATGGTACCATCATTTCATTTGACTACTTGTGAGATGTTGAGCAAATGGGAG
AAAATTGTCTCGACGGAAGGATCAGAGGTAGATGTGTGGCCATATCTTCAAACATTGACA
AGTGATGCCATTTCAAGAACTGCTTTTGGAAGTAGCTATGAAGAAGGTAGAAAGATACAT
GAACTTCAACAAGAACTAGCCAAAATTATTGTAAAAGAGACAGAGGCAAGTTACATTAGG
TTTCTGCCGACCAAAGAAAAGAGAAGGATGAACCGTCTACATCAGGAAGTACGTTCACTA
GTATTGAGAATAATCAATAAGAGAATGAATGAAATTGAAGCAGGGGAGACGTCTAATAGT
GATGACTTATTGGGCATATTATTGGAATCCAACTTGAAAGAAATCCAAGAGCATGGAAAT
AAGAAATTTGGAATGAGTATTGATGAGGTAATTGAAGAGTGTAAATTGTTCTATCTTGCT
GGACAAGAGACAACTTCAGCTTTGCTTGTATGGTCGATGATTTTATTGAGCAAACACTCC
GATTGGCAAGCTCGTGCTAGAGAAGAGGTTTTGCAAGTCTTTGGCAACAACATACCTGAT
TATGATAAGTTGAGTCAACTCAAAGTTGTAACCATGATTATGCAAGAAGTTTTGAGATTG
TATCCACCAATTTTTTTGATGGGTAGAGAGGTACACAAAGAAACCAAATTAGGCAACTTG
TCAATACCAAGTGGAGTGCAACTCCTATTGCCAACAATATTGTTGCATCATGACCAAGAA
ATATGGGGTGAAGATGTTAAAGAATTCAATCCAGAGAGGTTTAGTGAAGGAGTCAATAGA
GCAACAAAAGGAAAATTTGCATATTTTCCATTTAGTTGGGGACCTAGAAATTGCATTGGA
CAAAACTTTGCTATGTTGGAGGCTAAAATGGCACTTGCTATGATTCTACAGCAATTTGCT
TTTGAAGTTTCTCCATCTTATGCTCATGTTCCTTATTCAGTTTTCACTCTTCTACCTCAA
TATGGTGCTCAACTAATTCTAAACAAGCTATAG