Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400027295
CDS Infomation

pacid=37473635 polypeptide=PGSC0003DMP400018619 locus=PGSC0003DMG400010527 ID=PGSC0003DMT400027295.v4.03 annot-version=v4.03
Sequence

ATGGATGGATTGGCTGAAACAGGATCATCTTCTTCTTCTTCTTCTTCTTTGTGGCCATGC
ACTTATGATGTTTTCTTAAGTTTTAGAGGAGAGGATGTACGGAAGAATTTCGTCGATCAT
CTATATACAGCTTTGCAGCAAAGAGGAATTCACACTTTTAAAGATGATGAAAAACTTGAA
AGAGGGAAATCTATTTCACCTTCACTTTTCAAAGCCATCGAAGAGTCGATGATTTCCATC
ATCATATTCTCTCAAAACTATGCTTCTTCTTCGTGGTGTCTAGATGAGCTAGTTAAGATC
ACTCAATGCATGAAACTCAGGGGACAGATTGTTCTTCCTGTCTTCTATGACGTGGATCCA
TCTGTCGTAAGAAAACAAAAGGCAAACGTTGGTGAATTCTTCGCTAAACATGAGTTAGAT
TTCAAAGATGATGAAGAAAGGGTGAAGAGATGGCGTACTGCTATGACAGAAGCAGCAAAT
GTATCTGGTTGGGATTTGCCAAATATTGCTAACGGGCACGAATCAAAATGTATCGAGCAA
ATTGTAGAATGTGTCATGGAGATATTAGATCATTCTGCTTCTGATGCTACTGAAAATCTT
GTTGGAATACGCTCAAGAATGGGGACGGTGTATTCCTTGTTGAATCTGGAGTCTGATAAA
GTTCAATTCGTTGGAATATGGGGAATGAGCGGAATTGGGAAAACAACTATAGCAAGAGCC
ATCTACGACAAGATTTTCCGTTACTTTCAAGGTACTACTTTCCTTCATGAAGTTGGAGAA
AATTCAGCCAAACATGGTATCCAACATTTGCAGCAGATACTTCTTTCTGAACTACTTCTG
TTAAAAGATCTAAGAATAAACAACGTATTTGAAGGAACCAGCTTGGTAAGAAGACGACTA
AATGGGAAACGAGTCCTAATTGTTCTTGATGATGTCAATCATGGAAACCAGTTAGATGCC
CTAGCTAAAAGCCATGACTGGTTTGGTGCAGGCAGTATAATCATCATAACAACAAAGGAT
AAGCAGTTGCTTCGTCAATATAACGTGGACAAAATGTATAAAGTGAGTCTGTTAAACACT
GATGAAAGTATTGAACTCCTTAGTTCATATGCATTCCAGAAACACCATCCCAAAAGTGGA
TATGAAGAGATCATAGCTGAAGTTGTTCGGTATGCTGGTGGTCTTCCATTAGCTCTTAAA
GTTTTGGGTTCCTCTCTGTATGGCAGAGGCATGATTGAATGGAGAGAAACAGTGGAGAGA
CTAAAACAAATTCCAGAAGGCGAAATTGTAGAAAAACTCAAAGTAAGTTTCAATGGACTA
AGTGAGATTGACCAAAAGATCTTCTTAGATATTGCATGTTTCTTTAAAGGGAAGAAGAAA
GGTTCTGTAATTAGAATTCTTCGTAGTTTCAGTTTTACTCCTGTCATTGGCATAAGAAAT
CTCATCGAAAAATCTCTTGTAACTGTTTCAAAAGGTCGGATTGTGATGCATCAGTTGATC
CAAGAGATGGGTTGGTATATTGTTCGCAAAGAAGCTTCAAACAATCTTGGCAAGTATACT
AGGCTCTGGTCTCCCGATGATATTCTTCATGTACTATCTGAAAATCCGGGCACAGAAGCT
GTGGAAGGCATATGGTTGCACTTGCCTATTCCGAAAGACATAAATGTTGGTGCAGAAGCC
TTCAAATATACGGACAACCTGAGGCTGCTCAAGATGCACAATGCAAGTGTCTCCGTAGCT
CCAGATTGTCTTCCTAATAAATTGATATGGCTTCATTGGCATGGCTACCCAATGAAGTCC
CTTCCAGCAGGTTTTCGAGCAGAAAGGCTTGTTTGTCTGAAAATGCAGTATAGCCGCGTT
GTACACTTGTGGAAGGGAATAAAGGTCCTACACAAACTGAAGTTTCTCAACCTTAGTCAC
TCCCAAAAGCTAGTCAGCTGTCCAGATTTCACGGGGGTGCCCAATCTCGAGAAGTTGGTT
CTTGAAGATTGTTCGAGTATAATTGAGATCCACCCTTCTGTCGGATATCTCAAAAATCTT
GTTCTACTAAACCTGAAGAACTGCAGGAATCTTAAGAGCCTTCCAAACAATATTCGATTG
GATAATCTTGAGACTTTAATTCTTTCTGGCTGCTTGAAACTCGCGAATTTCCCAGAAATC
ACGAGTGACATGAATTGCTTATCTGAGGTCTACTTGGAAGCTACAGATGTAAAAGAGTTG
CCTTCATCAATTGAACGTCTCACTGGCCTTCAATTGATGAATCTAGGCTACTGCAGGAAT
CTTACAAATTTACCAAAAACCATAGGCAGATTAAAATCTCTTAGGATTCTTATTCTCTCT
GGATGTTCAAAACTAGAAAAGTTGCCAGAGGAACTAGGACATATAGCAATCTTGGAGGAA
CTCTATTGTGACGAAACTGCCATTCGAAGCCCACCATCCTCAATTACACTATTGAAGAAC
CTTAAGATCTTATCTTTTCATGGATGTAAAGGCATGGTATCTCAGACATGGAATTCACTT
TTCTTGGCATGGCTTCGGCCAAGAAAACATAATCAAAAGCCAACTCCTTTTCCAGTTTAT
TTTCTTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400018619
PEP Infomation

pacid=37473635 transcript=PGSC0003DMT400027295 locus=PGSC0003DMG400010527 ID=PGSC0003DMT400027295.v4.03 annot-version=v4.03
Sequence

MDGLAETGSSSSSSSSLWPCTYDVFLSFRGEDVRKNFVDHLYTALQQRGIHTFKDDEKLE
RGKSISPSLFKAIEESMISIIIFSQNYASSSWCLDELVKITQCMKLRGQIVLPVFYDVDP
SVVRKQKANVGEFFAKHELDFKDDEERVKRWRTAMTEAANVSGWDLPNIANGHESKCIEQ
IVECVMEILDHSASDATENLVGIRSRMGTVYSLLNLESDKVQFVGIWGMSGIGKTTIARA
IYDKIFRYFQGTTFLHEVGENSAKHGIQHLQQILLSELLLLKDLRINNVFEGTSLVRRRL
NGKRVLIVLDDVNHGNQLDALAKSHDWFGAGSIIIITTKDKQLLRQYNVDKMYKVSLLNT
DESIELLSSYAFQKHHPKSGYEEIIAEVVRYAGGLPLALKVLGSSLYGRGMIEWRETVER
LKQIPEGEIVEKLKVSFNGLSEIDQKIFLDIACFFKGKKKGSVIRILRSFSFTPVIGIRN
LIEKSLVTVSKGRIVMHQLIQEMGWYIVRKEASNNLGKYTRLWSPDDILHVLSENPGTEA
VEGIWLHLPIPKDINVGAEAFKYTDNLRLLKMHNASVSVAPDCLPNKLIWLHWHGYPMKS
LPAGFRAERLVCLKMQYSRVVHLWKGIKVLHKLKFLNLSHSQKLVSCPDFTGVPNLEKLV
LEDCSSIIEIHPSVGYLKNLVLLNLKNCRNLKSLPNNIRLDNLETLILSGCLKLANFPEI
TSDMNCLSEVYLEATDVKELPSSIERLTGLQLMNLGYCRNLTNLPKTIGRLKSLRILILS
GCSKLEKLPEELGHIAILEELYCDETAIRSPPSSITLLKNLKILSFHGCKGMVSQTWNSL
FLAWLRPRKHNQKPTPFPVYFL*

Transcript Sequence

Transcript ID

PGSC0003DMT400027295
Transcript Infomation

pacid=37473635 locus=PGSC0003DMG400010527 ID=PGSC0003DMT400027295.v4.03 annot-version=v4.03
Sequence

ATGGATGGATTGGCTGAAACAGGATCATCTTCTTCTTCTTCTTCTTCTTTGTGGCCATGC
ACTTATGATGTTTTCTTAAGTTTTAGAGGAGAGGATGTACGGAAGAATTTCGTCGATCAT
CTATATACAGCTTTGCAGCAAAGAGGAATTCACACTTTTAAAGATGATGAAAAACTTGAA
AGAGGGAAATCTATTTCACCTTCACTTTTCAAAGCCATCGAAGAGTCGATGATTTCCATC
ATCATATTCTCTCAAAACTATGCTTCTTCTTCGTGGTGTCTAGATGAGCTAGTTAAGATC
ACTCAATGCATGAAACTCAGGGGACAGATTGTTCTTCCTGTCTTCTATGACGTGGATCCA
TCTGTCGTAAGAAAACAAAAGGCAAACGTTGGTGAATTCTTCGCTAAACATGAGTTAGAT
TTCAAAGATGATGAAGAAAGGGTGAAGAGATGGCGTACTGCTATGACAGAAGCAGCAAAT
GTATCTGGTTGGGATTTGCCAAATATTGCTAACGGGCACGAATCAAAATGTATCGAGCAA
ATTGTAGAATGTGTCATGGAGATATTAGATCATTCTGCTTCTGATGCTACTGAAAATCTT
GTTGGAATACGCTCAAGAATGGGGACGGTGTATTCCTTGTTGAATCTGGAGTCTGATAAA
GTTCAATTCGTTGGAATATGGGGAATGAGCGGAATTGGGAAAACAACTATAGCAAGAGCC
ATCTACGACAAGATTTTCCGTTACTTTCAAGGTACTACTTTCCTTCATGAAGTTGGAGAA
AATTCAGCCAAACATGGTATCCAACATTTGCAGCAGATACTTCTTTCTGAACTACTTCTG
TTAAAAGATCTAAGAATAAACAACGTATTTGAAGGAACCAGCTTGGTAAGAAGACGACTA
AATGGGAAACGAGTCCTAATTGTTCTTGATGATGTCAATCATGGAAACCAGTTAGATGCC
CTAGCTAAAAGCCATGACTGGTTTGGTGCAGGCAGTATAATCATCATAACAACAAAGGAT
AAGCAGTTGCTTCGTCAATATAACGTGGACAAAATGTATAAAGTGAGTCTGTTAAACACT
GATGAAAGTATTGAACTCCTTAGTTCATATGCATTCCAGAAACACCATCCCAAAAGTGGA
TATGAAGAGATCATAGCTGAAGTTGTTCGGTATGCTGGTGGTCTTCCATTAGCTCTTAAA
GTTTTGGGTTCCTCTCTGTATGGCAGAGGCATGATTGAATGGAGAGAAACAGTGGAGAGA
CTAAAACAAATTCCAGAAGGCGAAATTGTAGAAAAACTCAAAGTAAGTTTCAATGGACTA
AGTGAGATTGACCAAAAGATCTTCTTAGATATTGCATGTTTCTTTAAAGGGAAGAAGAAA
GGTTCTGTAATTAGAATTCTTCGTAGTTTCAGTTTTACTCCTGTCATTGGCATAAGAAAT
CTCATCGAAAAATCTCTTGTAACTGTTTCAAAAGGTCGGATTGTGATGCATCAGTTGATC
CAAGAGATGGGTTGGTATATTGTTCGCAAAGAAGCTTCAAACAATCTTGGCAAGTATACT
AGGCTCTGGTCTCCCGATGATATTCTTCATGTACTATCTGAAAATCCGGGCACAGAAGCT
GTGGAAGGCATATGGTTGCACTTGCCTATTCCGAAAGACATAAATGTTGGTGCAGAAGCC
TTCAAATATACGGACAACCTGAGGCTGCTCAAGATGCACAATGCAAGTGTCTCCGTAGCT
CCAGATTGTCTTCCTAATAAATTGATATGGCTTCATTGGCATGGCTACCCAATGAAGTCC
CTTCCAGCAGGTTTTCGAGCAGAAAGGCTTGTTTGTCTGAAAATGCAGTATAGCCGCGTT
GTACACTTGTGGAAGGGAATAAAGGTCCTACACAAACTGAAGTTTCTCAACCTTAGTCAC
TCCCAAAAGCTAGTCAGCTGTCCAGATTTCACGGGGGTGCCCAATCTCGAGAAGTTGGTT
CTTGAAGATTGTTCGAGTATAATTGAGATCCACCCTTCTGTCGGATATCTCAAAAATCTT
GTTCTACTAAACCTGAAGAACTGCAGGAATCTTAAGAGCCTTCCAAACAATATTCGATTG
GATAATCTTGAGACTTTAATTCTTTCTGGCTGCTTGAAACTCGCGAATTTCCCAGAAATC
ACGAGTGACATGAATTGCTTATCTGAGGTCTACTTGGAAGCTACAGATGTAAAAGAGTTG
CCTTCATCAATTGAACGTCTCACTGGCCTTCAATTGATGAATCTAGGCTACTGCAGGAAT
CTTACAAATTTACCAAAAACCATAGGCAGATTAAAATCTCTTAGGATTCTTATTCTCTCT
GGATGTTCAAAACTAGAAAAGTTGCCAGAGGAACTAGGACATATAGCAATCTTGGAGGAA
CTCTATTGTGACGAAACTGCCATTCGAAGCCCACCATCCTCAATTACACTATTGAAGAAC
CTTAAGATCTTATCTTTTCATGGATGTAAAGGCATGGTATCTCAGACATGGAATTCACTT
TTCTTGGCATGGCTTCGGCCAAGAAAACATAATCAAAAGCCAACTCCTTTTCCAGTTTAT
TTTCTTTGA