Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400027291
CDS Infomation

pacid=37475848 polypeptide=PGSC0003DMP400018616 locus=PGSC0003DMG400010525 ID=PGSC0003DMT400027291.v4.03 annot-version=v4.03
Sequence

ATGCAATTCTTGAGCTTGGCTTCCATCTTCCTTTTTCTATCTTTTCTATTTTTGTTAAGG
AAATGGAAAAACTCGAATAGCCAATCGAAAAAATTGCCTCCAGGTCCATGGAAACTTCCT
TTACTAGGAAGTATGCTTCATATGGCTGGTGGACTTCCACACCATGTCCTTAGAGATTTA
GCCAAAAAATATGGACCACTTATGCACCTTCAACTTGGTGAAGTCTCTGCAGTTGTAGTT
ACTTCTCCTGATATGGCGAAAGAAGTACTAAAAACTCATGACATAGCTTTCGCCTCTAGG
CCTAAACTTTTGGCCCCGGAAATTGTTTGTTACAACAGATCTGACATTGCCTTTTGCCCC
TATGGAGATTACTGGAGACAAATGCGTAAAATTTGTGTCTTGGAATTGTTGAGTGCCAAG
AATGTCCGGTCATATGGCTCGATTAGGCGTGATGAAGTTGATCGCCTTGTTAATTTTATC
CGGTCATCTTCGGGTGAGCCGGTTAATTTTACTGAAAGGTTGTTTTTGTTCACAAGTTCA
ATGACATGTAGATCAGCGTTCGGGAAAGTGTTCAAAGAACAGGACAAATTTATACAACTA
ATCAAAGAAGTGATAGGGTTAGCAGGAGGATTTGATGTGGCTGATATCTTTCCATCACTG
AAGTTTCTTCATGTGCTTAGTGGAATGAAGGGTAAAATTATGAATGCTCATGACAAGGTA
GATGCAATTGTTGAAGATGTCATCAATGAGCACAAGAAGAACATTGCAATGGGGAAAACT
AATGGTGCATTAGGTGGTGAAGATCTAATTGATGTCCTTATAAGACTTATGAATGATGGA
GGCCTTCAATTTCCGATCACCAACAACAACATCAAAGCTATTATTTTCGACATGTTTGCT
GCGGGAACAGAGACTTCATCGTCAACACTTGTCTGGGCAATGGTGCAAATGATGAAAAAT
CCAAGTGTGTTCGCCAAAGCTCAAGCAGAAGTGCGAGAAGCCTTTAAAGACAAAGAAACG
TTCGATGAAAATGATGTAGAGGAGCTGAAATACTTAAAGTTAGTCATTAAAGAAACTCTA
AGACTCCATCCACCAGTTCCACTTTTAGTCCCAAGAGAATGTAGGGAAGAGACGGATATA
AACAGCTACACTATTCCTGTGAAGACCAAAGTCATGGTTAATGTTTGGGCATTGGGAAGA
GATCCGAAATATTGGGATGATGCAGAAAGCTTTAAGCCAGAGAGATTTGAGCAGCGCTCT
GTCGACTTTGTTGGTAACAATTTTGAGTATCTTCCCTTTGGCAGTGGGAGAAGGATTTGT
CCCGGGATATCATTTGGCTTAGCTAATGTTTATTTGCCGTTGGCTCATTTGTTATATCAC
TTCGACTGGAAACTCCCTATTGGAATGGAGCCAAAAGACTTGAACTTGACTGAATTGGTT
GGAGTAACTGCTGCCAGAAAAGATGACCTTATTTTGGTTGCCACTCCTTATGAACCACCT
CGACAATGA

Peptide Sequence

PEP ID

PGSC0003DMP400018616
PEP Infomation

pacid=37475848 transcript=PGSC0003DMT400027291 locus=PGSC0003DMG400010525 ID=PGSC0003DMT400027291.v4.03 annot-version=v4.03
Sequence

MQFLSLASIFLFLSFLFLLRKWKNSNSQSKKLPPGPWKLPLLGSMLHMAGGLPHHVLRDL
AKKYGPLMHLQLGEVSAVVVTSPDMAKEVLKTHDIAFASRPKLLAPEIVCYNRSDIAFCP
YGDYWRQMRKICVLELLSAKNVRSYGSIRRDEVDRLVNFIRSSSGEPVNFTERLFLFTSS
MTCRSAFGKVFKEQDKFIQLIKEVIGLAGGFDVADIFPSLKFLHVLSGMKGKIMNAHDKV
DAIVEDVINEHKKNIAMGKTNGALGGEDLIDVLIRLMNDGGLQFPITNNNIKAIIFDMFA
AGTETSSSTLVWAMVQMMKNPSVFAKAQAEVREAFKDKETFDENDVEELKYLKLVIKETL
RLHPPVPLLVPRECREETDINSYTIPVKTKVMVNVWALGRDPKYWDDAESFKPERFEQRS
VDFVGNNFEYLPFGSGRRICPGISFGLANVYLPLAHLLYHFDWKLPIGMEPKDLNLTELV
GVTAARKDDLILVATPYEPPRQ*

Transcript Sequence

Transcript ID

PGSC0003DMT400027291
Transcript Infomation

pacid=37475848 locus=PGSC0003DMG400010525 ID=PGSC0003DMT400027291.v4.03 annot-version=v4.03
Sequence

ATGCAATTCTTGAGCTTGGCTTCCATCTTCCTTTTTCTATCTTTTCTATTTTTGTTAAGG
AAATGGAAAAACTCGAATAGCCAATCGAAAAAATTGCCTCCAGGTCCATGGAAACTTCCT
TTACTAGGAAGTATGCTTCATATGGCTGGTGGACTTCCACACCATGTCCTTAGAGATTTA
GCCAAAAAATATGGACCACTTATGCACCTTCAACTTGGTGAAGTCTCTGCAGTTGTAGTT
ACTTCTCCTGATATGGCGAAAGAAGTACTAAAAACTCATGACATAGCTTTCGCCTCTAGG
CCTAAACTTTTGGCCCCGGAAATTGTTTGTTACAACAGATCTGACATTGCCTTTTGCCCC
TATGGAGATTACTGGAGACAAATGCGTAAAATTTGTGTCTTGGAATTGTTGAGTGCCAAG
AATGTCCGGTCATATGGCTCGATTAGGCGTGATGAAGTTGATCGCCTTGTTAATTTTATC
CGGTCATCTTCGGGTGAGCCGGTTAATTTTACTGAAAGGTTGTTTTTGTTCACAAGTTCA
ATGACATGTAGATCAGCGTTCGGGAAAGTGTTCAAAGAACAGGACAAATTTATACAACTA
ATCAAAGAAGTGATAGGGTTAGCAGGAGGATTTGATGTGGCTGATATCTTTCCATCACTG
AAGTTTCTTCATGTGCTTAGTGGAATGAAGGGTAAAATTATGAATGCTCATGACAAGGTA
GATGCAATTGTTGAAGATGTCATCAATGAGCACAAGAAGAACATTGCAATGGGGAAAACT
AATGGTGCATTAGGTGGTGAAGATCTAATTGATGTCCTTATAAGACTTATGAATGATGGA
GGCCTTCAATTTCCGATCACCAACAACAACATCAAAGCTATTATTTTCGACATGTTTGCT
GCGGGAACAGAGACTTCATCGTCAACACTTGTCTGGGCAATGGTGCAAATGATGAAAAAT
CCAAGTGTGTTCGCCAAAGCTCAAGCAGAAGTGCGAGAAGCCTTTAAAGACAAAGAAACG
TTCGATGAAAATGATGTAGAGGAGCTGAAATACTTAAAGTTAGTCATTAAAGAAACTCTA
AGACTCCATCCACCAGTTCCACTTTTAGTCCCAAGAGAATGTAGGGAAGAGACGGATATA
AACAGCTACACTATTCCTGTGAAGACCAAAGTCATGGTTAATGTTTGGGCATTGGGAAGA
GATCCGAAATATTGGGATGATGCAGAAAGCTTTAAGCCAGAGAGATTTGAGCAGCGCTCT
GTCGACTTTGTTGGTAACAATTTTGAGTATCTTCCCTTTGGCAGTGGGAGAAGGATTTGT
CCCGGGATATCATTTGGCTTAGCTAATGTTTATTTGCCGTTGGCTCATTTGTTATATCAC
TTCGACTGGAAACTCCCTATTGGAATGGAGCCAAAAGACTTGAACTTGACTGAATTGGTT
GGAGTAACTGCTGCCAGAAAAGATGACCTTATTTTGGTTGCCACTCCTTATGAACCACCT
CGACAATGA