Plant GARDEN
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TOP > About the Species(Solanum tuberosum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400027257
CDS Infomation

pacid=37477217 polypeptide=PGSC0003DMP400018597 locus=PGSC0003DMG400010512 ID=PGSC0003DMT400027257.v4.03 annot-version=v4.03
Sequence

ATGGGAGGAGGCAACTTAAATGCAACATTTTTGGTGGATAATATTACTTCAACAAAGAAC
ATCATGTCACTCTCTATTGATGATGCCTTTTGCCTTCCTTCTCCATTGCCCACTTGGCCT
TCAGGTGGATGCTTTGCAAGTGGATTCATTGATCTTGGAGGATTACAAGTGTCTCAAATA
TCATCCTTAACTAAAGTTTGGTCTACTCATGAAGGTGGACCAGATAATCTTGGAGCTACA
TTCTTTGAACCATCAAATATACCAAATGGATTCTTTATGTTTGGTTCCTATACCCAAACT
AATAATATTCCCCTTTTTGGGTGGACTCTTGCTGGGAGAGATACATCACGAGGTACGCTC
AAGATGCCAACTGACTACACCCTTGTATGGAGTAGTCACAACTTGAAAATCAAGCAGGAT
GGTGTTGGCTACATCTGGCTGCCAATACCTCCTGAGGGTTATAAAGCCATAGGCCATGTT
GTCACCACCTCGCCTCAGAAGCCTTCTCTGGATAAAGTCCGTTGTGTCCGTGATGATCTC
ACTGATGTATGTGAAAGTCATGATTGGATTTGGGGCACCAATGGCTTGAATGTGTACTCA
TCGAGACCTAGAGACAGAGGAGTGCGAGCTTTAGGAGTGGCAACAGGTGCTTTTATGGTT
CAGAACAATGGAGCTGCAGAGTCATTAGCTTGTTTAAAGAATGTTAAATCTGATATATCT
GCGATGCCAAATTTGAACCAAGTTAAGGCATTGGTTCAAGCATACTCTCCGCTGATTTAC
TTTCATCCTGATGAAGAATACTATCCCTCATCAGTGACTTGGTTTTTTCAGAATGGAGCA
TTATTATATACCAAAGGACAAGAATCTTCACCTGTAGGTATTCATCCCACAGGTTCAAAT
CTTCCTCAAGATGGTTCGAACGATGGTGCTTACTGGCTGGACCTCCCGATTGATGATGCT
GCGAAAACTAATGTCAAGAAAGGAGATTTACAGGGTGCCACAGCCTACTTACACGTTAAA
CCAATGTTTGGTGCAACATATACTGATATTGCTGTGTGGCTATTTTATCCGTTTAATGGA
CCTGCAAAGGCTAAACTCGAATTCATGACCATTTCCTTGGGGAAAATTGGAGAGCACGTT
GGTGATTGGGAACATGTTACATTGAGGATTAGCAACTTCAATGGGGAGTTACAAGGCATA
TACTTTTCACAACACAGTGGAGGGATTTGGGTACGTGCCTCTCAGCTAGAATTTCAAAAC
GGTAACAAACCCGTGGTGTACTCATCGCTGCATGGACACGCTGCTTATCCAGAACTAGGA
AAGAATTTGCAAGGGAGTGGAGATGTAGGAATCAGAAATGATACAGGAAAGGGGAAGTTG
ATGGACATAGGAGCAAACTTCTTAATAGTAGCAGCAGAATACTTGGGTTCAACAATAGTG
GAGCCAGTATGGCTTAATTATGGAAGGGAATGGGGTCCAAAAATTAGCTATGATATATCA
AAAGAGCTGAGGAAAGTAGAAAGATTTATGATTGGGAAACTGAAGAAAGCTATTGAGAAA
ATAGTGAGAGATCTACCAAATGAGGTTTTGGGTGAGGAAGGACCAATAGGTCCAAAGTTT
AAGGACATGTGGAGTGGTGATGAAAGGGGTTGA

Peptide Sequence

PEP ID

PGSC0003DMP400018597
PEP Infomation

pacid=37477217 transcript=PGSC0003DMT400027257 locus=PGSC0003DMG400010512 ID=PGSC0003DMT400027257.v4.03 annot-version=v4.03
Sequence

MGGGNLNATFLVDNITSTKNIMSLSIDDAFCLPSPLPTWPSGGCFASGFIDLGGLQVSQI
SSLTKVWSTHEGGPDNLGATFFEPSNIPNGFFMFGSYTQTNNIPLFGWTLAGRDTSRGTL
KMPTDYTLVWSSHNLKIKQDGVGYIWLPIPPEGYKAIGHVVTTSPQKPSLDKVRCVRDDL
TDVCESHDWIWGTNGLNVYSSRPRDRGVRALGVATGAFMVQNNGAAESLACLKNVKSDIS
AMPNLNQVKALVQAYSPLIYFHPDEEYYPSSVTWFFQNGALLYTKGQESSPVGIHPTGSN
LPQDGSNDGAYWLDLPIDDAAKTNVKKGDLQGATAYLHVKPMFGATYTDIAVWLFYPFNG
PAKAKLEFMTISLGKIGEHVGDWEHVTLRISNFNGELQGIYFSQHSGGIWVRASQLEFQN
GNKPVVYSSLHGHAAYPELGKNLQGSGDVGIRNDTGKGKLMDIGANFLIVAAEYLGSTIV
EPVWLNYGREWGPKISYDISKELRKVERFMIGKLKKAIEKIVRDLPNEVLGEEGPIGPKF
KDMWSGDERG*

Transcript Sequence

Transcript ID

PGSC0003DMT400027257
Transcript Infomation

pacid=37477217 locus=PGSC0003DMG400010512 ID=PGSC0003DMT400027257.v4.03 annot-version=v4.03
Sequence

ATGGGAGGAGGCAACTTAAATGCAACATTTTTGGTGGATAATATTACTTCAACAAAGAAC
ATCATGTCACTCTCTATTGATGATGCCTTTTGCCTTCCTTCTCCATTGCCCACTTGGCCT
TCAGGTGGATGCTTTGCAAGTGGATTCATTGATCTTGGAGGATTACAAGTGTCTCAAATA
TCATCCTTAACTAAAGTTTGGTCTACTCATGAAGGTGGACCAGATAATCTTGGAGCTACA
TTCTTTGAACCATCAAATATACCAAATGGATTCTTTATGTTTGGTTCCTATACCCAAACT
AATAATATTCCCCTTTTTGGGTGGACTCTTGCTGGGAGAGATACATCACGAGGTACGCTC
AAGATGCCAACTGACTACACCCTTGTATGGAGTAGTCACAACTTGAAAATCAAGCAGGAT
GGTGTTGGCTACATCTGGCTGCCAATACCTCCTGAGGGTTATAAAGCCATAGGCCATGTT
GTCACCACCTCGCCTCAGAAGCCTTCTCTGGATAAAGTCCGTTGTGTCCGTGATGATCTC
ACTGATGTATGTGAAAGTCATGATTGGATTTGGGGCACCAATGGCTTGAATGTGTACTCA
TCGAGACCTAGAGACAGAGGAGTGCGAGCTTTAGGAGTGGCAACAGGTGCTTTTATGGTT
CAGAACAATGGAGCTGCAGAGTCATTAGCTTGTTTAAAGAATGTTAAATCTGATATATCT
GCGATGCCAAATTTGAACCAAGTTAAGGCATTGGTTCAAGCATACTCTCCGCTGATTTAC
TTTCATCCTGATGAAGAATACTATCCCTCATCAGTGACTTGGTTTTTTCAGAATGGAGCA
TTATTATATACCAAAGGACAAGAATCTTCACCTGTAGGTATTCATCCCACAGGTTCAAAT
CTTCCTCAAGATGGTTCGAACGATGGTGCTTACTGGCTGGACCTCCCGATTGATGATGCT
GCGAAAACTAATGTCAAGAAAGGAGATTTACAGGGTGCCACAGCCTACTTACACGTTAAA
CCAATGTTTGGTGCAACATATACTGATATTGCTGTGTGGCTATTTTATCCGTTTAATGGA
CCTGCAAAGGCTAAACTCGAATTCATGACCATTTCCTTGGGGAAAATTGGAGAGCACGTT
GGTGATTGGGAACATGTTACATTGAGGATTAGCAACTTCAATGGGGAGTTACAAGGCATA
TACTTTTCACAACACAGTGGAGGGATTTGGGTACGTGCCTCTCAGCTAGAATTTCAAAAC
GGTAACAAACCCGTGGTGTACTCATCGCTGCATGGACACGCTGCTTATCCAGAACTAGGA
AAGAATTTGCAAGGGAGTGGAGATGTAGGAATCAGAAATGATACAGGAAAGGGGAAGTTG
ATGGACATAGGAGCAAACTTCTTAATAGTAGCAGCAGAATACTTGGGTTCAACAATAGTG
GAGCCAGTATGGCTTAATTATGGAAGGGAATGGGGTCCAAAAATTAGCTATGATATATCA
AAAGAGCTGAGGAAAGTAGAAAGATTTATGATTGGGAAACTGAAGAAAGCTATTGAGAAA
ATAGTGAGAGATCTACCAAATGAGGTTTTGGGTGAGGAAGGACCAATAGGTCCAAAGTTT
AAGGACATGTGGAGTGGTGATGAAAGGGGTTGA