Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum tuberosum

CDS Sequence

CDS ID

PGSC0003DMT400027206
CDS Infomation

pacid=37440109 polypeptide=PGSC0003DMP400018570 locus=PGSC0003DMG400010493 ID=PGSC0003DMT400027206.v4.03 annot-version=v4.03
Sequence

ATGGATTCATATGAAGCAACAAAAACAGTTTTATCAAGAATTGAAAGCTTGGATCCAGAA
AATGCATCAAAAATCATGTGTTATTTACTTACTCAAGATCAAGGTGATAAGGAGATGATA
AGATTAGCATTTGGTCCAGAAAATCTGTTAATTTCTATTATAAATCAAACAAAAACTCGT
TTAGGACTTTTATCAAACAGTTCATCTGCACCTACAACACCTTCATCTTCTTCCCATTTT
GGTTCCAATAAACTCAACCCATTTCCTCAATCTTCACCTAGAATCATGATTCCGAACAAT
GGGTTTCAATCTTCACCTGTTTCTTCTCCATGGTCAGGTGGGTCACCGCCAGTTTTTTCA
AGAAGTCCTAGACCCGTGTCGTATGCTGCTGTTGTGAATGGTTCTGGGTATGAAGAACAG
TTGTTTGACCCGGTTATGAGTCCGAGTGGAAGAAGTGATTCAATGGGTATGGGTTTTTGT
GAGGAAAATCAAGAAAAACAGTTACATCGTAGGAGTTGTTCAGTGAATGATGTTTTTCTT
GGTGGTGGTGGGTGTGAGGAAAATGGTGGGTTTGGTTGGAGGCCTTGCATGTATTATGCT
AAAGGGTTTTGTAAGAATGGGAATAGTTGTAAGTTTATGCATGGTGGATTTGGTGATTCA
ACAGATGAGTCTTCTGGGAATGTTGAGTGTTTTGATGAGATTATGCGTGTGAAAGCGTTA
CAACAACAGAGATTTGCTGCTGCTTCTCAGTTTATGGCTTCTGGAGGTCGTCATCCTTTT
GGTTTCAACAGATGCATGAATGTTTACAATGATAATCAAAGATCGGCTGCAGCAGCATTA
ATGATGAGTGATGAGTTCCACAAACATGGTCGATCCTTACCCGACAGAAATGAATTTTCA
GCAATGGCGCTGGTTGGAAATTCGAGTTCTTGTTTGAGACAAATTTACTTGACATTTCCT
GCTGATAGCACATTCAAGGAGGAGGATGTGTCTAATTACTTTAGTATGTACGGGCCAGTG
CAAGATGTTAGAATTCCATATCAGCAGAAGCGGATGTTTGGATTTGTTACGTTCATCTAC
CCCGAAACTGTGAAGCTTATTTTGGCCAAAGGCAACCCTCATTTTGTGTGTGATTCTCGT
GTGCTCGTTAAACCATACAAAGAAAAGGGAAAAATCCCAGACAAGAAGCAATTTCATCTA
CAGCAGCAGCCTATTGATAGAGAAGAGCTCTCAGCATGTTTAAGTCCCTCAGGGATTGAG
TCTAGAGAGATATATGACATTCCCTTTGGAGGAAGGATGTTTTATAATCCGCATGAGATG
TTGAGAAGAAAAATGGAGCAGGATGCTGAACTGCAGCAAGCGATTGAGTTTCAAGGCAGA
AGGTTAATGAATTTGCAACTGATGAAGAACCACCATCACAATAGTCACTTCCATCCCAGC
GTCGTCTCTCCAGGTGTTCCATTTGCCTCCCAGATGCAAACTCAGTTTCAAAACCATCAG
GGTTTTGTTTGTTCGTCTAATGGCATCAACCAAGAAGCCTTAGCAGAAAATAATGGTGTC
CAGGAACCCATTAAACCCCTAGCTAATGCAGCTGATGAGAATCAGGAGATGCCACATACA
AATAACAGAAATGGCAGTTGCAGCAAGGAGCAGGCCTCAAATACTGACAACTCCGATCCT
CAAGATAGCTTTGACCACAACCTTCCTGATAATCTATTTGCTTCTCCTACAAAATCGGCT
GCAGAACAACATGTTGCGTTTTCAACTGATTCAGCTGCAGCTGATGTTAGTTCCGCAATA
CCAATGCCTGCTACTGCTACTACTACTACTACTACTACGAACAATATCCCTATGCTTCCC
ACCACTTCTGCCTTCAACATGGCTTCTCTCAAATCATGTTACTTTCAGGTTCCAAGGTTT
ACATCTGGCCAAGAAGCCACTGAAACTTAA

Peptide Sequence

PEP ID

PGSC0003DMP400018570
PEP Infomation

pacid=37440109 transcript=PGSC0003DMT400027206 locus=PGSC0003DMG400010493 ID=PGSC0003DMT400027206.v4.03 annot-version=v4.03
Sequence

MDSYEATKTVLSRIESLDPENASKIMCYLLTQDQGDKEMIRLAFGPENLLISIINQTKTR
LGLLSNSSSAPTTPSSSSHFGSNKLNPFPQSSPRIMIPNNGFQSSPVSSPWSGGSPPVFS
RSPRPVSYAAVVNGSGYEEQLFDPVMSPSGRSDSMGMGFCEENQEKQLHRRSCSVNDVFL
GGGGCEENGGFGWRPCMYYAKGFCKNGNSCKFMHGGFGDSTDESSGNVECFDEIMRVKAL
QQQRFAAASQFMASGGRHPFGFNRCMNVYNDNQRSAAAALMMSDEFHKHGRSLPDRNEFS
AMALVGNSSSCLRQIYLTFPADSTFKEEDVSNYFSMYGPVQDVRIPYQQKRMFGFVTFIY
PETVKLILAKGNPHFVCDSRVLVKPYKEKGKIPDKKQFHLQQQPIDREELSACLSPSGIE
SREIYDIPFGGRMFYNPHEMLRRKMEQDAELQQAIEFQGRRLMNLQLMKNHHHNSHFHPS
VVSPGVPFASQMQTQFQNHQGFVCSSNGINQEALAENNGVQEPIKPLANAADENQEMPHT
NNRNGSCSKEQASNTDNSDPQDSFDHNLPDNLFASPTKSAAEQHVAFSTDSAAADVSSAI
PMPATATTTTTTTNNIPMLPTTSAFNMASLKSCYFQVPRFTSGQEATET*

Transcript Sequence

Transcript ID

PGSC0003DMT400027206
Transcript Infomation

pacid=37440109 locus=PGSC0003DMG400010493 ID=PGSC0003DMT400027206.v4.03 annot-version=v4.03
Sequence

ATGGATTCATATGAAGCAACAAAAACAGTTTTATCAAGAATTGAAAGCTTGGATCCAGAA
AATGCATCAAAAATCATGTGTTATTTACTTACTCAAGATCAAGGTGATAAGGAGATGATA
AGATTAGCATTTGGTCCAGAAAATCTGTTAATTTCTATTATAAATCAAACAAAAACTCGT
TTAGGACTTTTATCAAACAGTTCATCTGCACCTACAACACCTTCATCTTCTTCCCATTTT
GGTTCCAATAAACTCAACCCATTTCCTCAATCTTCACCTAGAATCATGATTCCGAACAAT
GGGTTTCAATCTTCACCTGTTTCTTCTCCATGGTCAGGTGGGTCACCGCCAGTTTTTTCA
AGAAGTCCTAGACCCGTGTCGTATGCTGCTGTTGTGAATGGTTCTGGGTATGAAGAACAG
TTGTTTGACCCGGTTATGAGTCCGAGTGGAAGAAGTGATTCAATGGGTATGGGTTTTTGT
GAGGAAAATCAAGAAAAACAGTTACATCGTAGGAGTTGTTCAGTGAATGATGTTTTTCTT
GGTGGTGGTGGGTGTGAGGAAAATGGTGGGTTTGGTTGGAGGCCTTGCATGTATTATGCT
AAAGGGTTTTGTAAGAATGGGAATAGTTGTAAGTTTATGCATGGTGGATTTGGTGATTCA
ACAGATGAGTCTTCTGGGAATGTTGAGTGTTTTGATGAGATTATGCGTGTGAAAGCGTTA
CAACAACAGAGATTTGCTGCTGCTTCTCAGTTTATGGCTTCTGGAGGTCGTCATCCTTTT
GGTTTCAACAGATGCATGAATGTTTACAATGATAATCAAAGATCGGCTGCAGCAGCATTA
ATGATGAGTGATGAGTTCCACAAACATGGTCGATCCTTACCCGACAGAAATGAATTTTCA
GCAATGGCGCTGGTTGGAAATTCGAGTTCTTGTTTGAGACAAATTTACTTGACATTTCCT
GCTGATAGCACATTCAAGGAGGAGGATGTGTCTAATTACTTTAGTATGTACGGGCCAGTG
CAAGATGTTAGAATTCCATATCAGCAGAAGCGGATGTTTGGATTTGTTACGTTCATCTAC
CCCGAAACTGTGAAGCTTATTTTGGCCAAAGGCAACCCTCATTTTGTGTGTGATTCTCGT
GTGCTCGTTAAACCATACAAAGAAAAGGGAAAAATCCCAGACAAGAAGCAATTTCATCTA
CAGCAGCAGCCTATTGATAGAGAAGAGCTCTCAGCATGTTTAAGTCCCTCAGGGATTGAG
TCTAGAGAGATATATGACATTCCCTTTGGAGGAAGGATGTTTTATAATCCGCATGAGATG
TTGAGAAGAAAAATGGAGCAGGATGCTGAACTGCAGCAAGCGATTGAGTTTCAAGGCAGA
AGGTTAATGAATTTGCAACTGATGAAGAACCACCATCACAATAGTCACTTCCATCCCAGC
GTCGTCTCTCCAGGTGTTCCATTTGCCTCCCAGATGCAAACTCAGTTTCAAAACCATCAG
GGTTTTGTTTGTTCGTCTAATGGCATCAACCAAGAAGCCTTAGCAGAAAATAATGGTGTC
CAGGAACCCATTAAACCCCTAGCTAATGCAGCTGATGAGAATCAGGAGATGCCACATACA
AATAACAGAAATGGCAGTTGCAGCAAGGAGCAGGCCTCAAATACTGACAACTCCGATCCT
CAAGATAGCTTTGACCACAACCTTCCTGATAATCTATTTGCTTCTCCTACAAAATCGGCT
GCAGAACAACATGTTGCGTTTTCAACTGATTCAGCTGCAGCTGATGTTAGTTCCGCAATA
CCAATGCCTGCTACTGCTACTACTACTACTACTACTACGAACAATATCCCTATGCTTCCC
ACCACTTCTGCCTTCAACATGGCTTCTCTCAAATCATGTTACTTTCAGGTTCCAAGGTTT
ACATCTGGCCAAGAAGCCACTGAAACTTAA